RNA–Protein interactions for RNA: ENST00000451586.1

TPR-202, Transcript of translocated promoter region, nuclear basket protein, humanhuman

TSL 2

Gene TPR, Length 515 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-202ENST00000451586 TRDNQ13061 729 aa28.74■■■□□ 2.19
TPR-202ENST00000451586 PABPC4Q13310 644 aaKnown RBP eCLIP28.74■■■□□ 2.19
TPR-202ENST00000451586 SPICE1Q8N0Z3 855 aa28.74■■■□□ 2.19
TPR-202ENST00000451586 MYH4Q9Y623 1939 aa28.74■■■□□ 2.19
TPR-202ENST00000451586 RAD21O60216 631 aa28.73■■■□□ 2.19
TPR-202ENST00000451586 HOXA7P31268 230 aaPredicted RBP28.73■■■□□ 2.19
TPR-202ENST00000451586 NT5C2P49902 561 aa28.73■■■□□ 2.19
TPR-202ENST00000451586 LBX1P52954 281 aa28.73■■■□□ 2.19
TPR-202ENST00000451586 PPP4R3BQ5MIZ7 849 aa28.73■■■□□ 2.19
TPR-202ENST00000451586 LRRC47Q8N1G4 583 aaKnown RBP28.73■■■□□ 2.19
TPR-202ENST00000451586 PARK7Q99497 189 aaKnown RBP28.73■■■□□ 2.19
TPR-202ENST00000451586 GOPCQ9HD26 462 aa28.73■■■□□ 2.19
TPR-202ENST00000451586 OSBPP22059 807 aa28.72■■■□□ 2.19
TPR-202ENST00000451586 NOVP48745 357 aa28.72■■■□□ 2.19
TPR-202ENST00000451586 NCOA7Q8NI08 942 aa28.72■■■□□ 2.19
TPR-202ENST00000451586 ASCC2Q9H1I8 757 aaPredicted RBP28.72■■■□□ 2.19
TPR-202ENST00000451586 RPAP3Q9H6T3 665 aaPredicted RBP28.72■■■□□ 2.19
TPR-202ENST00000451586 USP17L15C9J2P7 530 aa28.71■■■□□ 2.19
TPR-202ENST00000451586 USP17L13C9JLJ4 530 aa28.71■■■□□ 2.19
TPR-202ENST00000451586 USP17L11C9JVI0 530 aa28.71■■■□□ 2.19
TPR-202ENST00000451586 USP17L18D6R9N7 530 aa28.71■■■□□ 2.19
TPR-202ENST00000451586 USP17L22D6RA61 530 aa28.71■■■□□ 2.19
TPR-202ENST00000451586 USP17L17D6RBQ6 530 aa28.71■■■□□ 2.19
TPR-202ENST00000451586 USP17L19D6RCP7 530 aa28.71■■■□□ 2.19
TPR-202ENST00000451586 USP17L20D6RJB6 530 aa28.71■■■□□ 2.19
TPR-202ENST00000451586 F5H6K3 240 aa28.71■■■□□ 2.19
TPR-202ENST00000451586 KLRC3Q07444 240 aa28.71■■■□□ 2.19
TPR-202ENST00000451586 USP17L24Q0WX57 530 aa28.71■■■□□ 2.19
TPR-202ENST00000451586 RNF20Q5VTR2 975 aa28.71■■■□□ 2.19
TPR-202ENST00000451586 CYB5R4Q7L1T6 521 aa28.71■■■□□ 2.19
TPR-202ENST00000451586 LPAR1Q92633 364 aa28.71■■■□□ 2.19
TPR-202ENST00000451586 PNMA3Q9UL41 463 aa28.71■■■□□ 2.19
TPR-202ENST00000451586 GPR25O00155 361 aa28.7■■■□□ 2.18
TPR-202ENST00000451586 TLR2O60603 784 aa28.7■■■□□ 2.18
TPR-202ENST00000451586 CATSPERGQ6ZRH7 1159 aa28.7■■■□□ 2.18
TPR-202ENST00000451586 RALYLQ86SE5 291 aaKnown RBP28.7■■■□□ 2.18
TPR-202ENST00000451586 IQCA1Q86XH1 822 aa28.7■■■□□ 2.18
TPR-202ENST00000451586 RASEFQ8IZ41 740 aa28.7■■■□□ 2.18
TPR-202ENST00000451586 P2RX7Q99572 595 aaKnown RBP28.7■■■□□ 2.18
TPR-202ENST00000451586 NDUFB10O96000 172 aa28.69■■■□□ 2.18
TPR-202ENST00000451586 IRX3P78415 501 aaPredicted RBP28.69■■■□□ 2.18
TPR-202ENST00000451586 RCSD1Q6JBY9 416 aa28.69■■■□□ 2.18
TPR-202ENST00000451586 TTC14Q96N46 770 aa28.69■■■□□ 2.18
TPR-202ENST00000451586 ZSCAN10Q96SZ4 725 aaPredicted RBP28.69■■■□□ 2.18
TPR-202ENST00000451586 TMEM47Q9BQJ4 181 aa28.69■■■□□ 2.18
TPR-202ENST00000451586 USP26Q9BXU7 913 aa28.69■■■□□ 2.18
TPR-202ENST00000451586 CPA4Q9UI42 421 aa28.69■■■□□ 2.18
TPR-202ENST00000451586 ADGRA2Q96PE1 1338 aa28.69■■■□□ 2.18
TPR-202ENST00000451586 WDR46O15213 610 aaKnown RBP28.68■■■□□ 2.18
TPR-202ENST00000451586 SMCR8Q8TEV9 937 aaPredicted RBP28.68■■■□□ 2.18
TPR-202ENST00000451586 SYNPO2Q9UMS6 1093 aa28.68■■■□□ 2.18
TPR-202ENST00000451586 TOP1P11387 765 aaKnown RBP28.67■■■□□ 2.18
TPR-202ENST00000451586 HSPA4P34932 840 aa28.67■■■□□ 2.18
TPR-202ENST00000451586 CCDC178Q5BJE1 867 aa28.67■■■□□ 2.18
TPR-202ENST00000451586 SLFN13Q68D06 897 aa28.67■■■□□ 2.18
TPR-202ENST00000451586 C17orf99Q6UX52 265 aa28.67■■■□□ 2.18
TPR-202ENST00000451586 MB21D2Q8IYB1 491 aaPredicted RBP28.67■■■□□ 2.18
TPR-202ENST00000451586 GMCL1P1Q8NEA9 526 aa28.67■■■□□ 2.18
TPR-202ENST00000451586 CHMP4CQ96CF2 233 aa28.67■■■□□ 2.18
TPR-202ENST00000451586 NUP88Q99567 741 aaPredicted RBP28.67■■■□□ 2.18
TPR-202ENST00000451586 TANGO6Q9C0B7 1094 aa28.67■■■□□ 2.18
TPR-202ENST00000451586 NOM1Q5C9Z4 860 aaKnown RBP28.66■■■□□ 2.18
TPR-202ENST00000451586 FAM83BQ5T0W9 1011 aa28.66■■■□□ 2.18
TPR-202ENST00000451586 CHST3Q7LGC8 479 aa28.66■■■□□ 2.18
TPR-202ENST00000451586 DGKHQ86XP1 1220 aa28.66■■■□□ 2.18
TPR-202ENST00000451586 ZNF296Q8WUU4 475 aaPredicted RBP28.66■■■□□ 2.18
TPR-202ENST00000451586 KCNB2Q92953 911 aa28.66■■■□□ 2.18
TPR-202ENST00000451586 UBAC1Q9BSL1 405 aa28.66■■■□□ 2.18
TPR-202ENST00000451586 CASP8AP2Q9UKL3 1982 aa28.65■■■□□ 2.18
TPR-202ENST00000451586 EPB41L2O43491 1005 aaKnown RBP28.65■■■□□ 2.18
TPR-202ENST00000451586 ZKSCAN1P17029 563 aaPredicted RBP28.65■■■□□ 2.18
TPR-202ENST00000451586 COL9A3Q14050 684 aaPredicted RBP28.65■■■□□ 2.18
TPR-202ENST00000451586 TSGA10IPQ3SY00 556 aa28.65■■■□□ 2.18
TPR-202ENST00000451586 ENAHQ8N8S7 591 aaPredicted RBP28.65■■■□□ 2.18
TPR-202ENST00000451586 ANKS1AQ92625 1134 aa28.65■■■□□ 2.18
TPR-202ENST00000451586 MTMR7Q9Y216 660 aa28.65■■■□□ 2.18
TPR-202ENST00000451586 TNKSO95271 1327 aa28.65■■■□□ 2.18
TPR-202ENST00000451586 FKTNO75072 461 aa28.64■■■□□ 2.18
TPR-202ENST00000451586 ANTXR2P58335 489 aa28.64■■■□□ 2.18
TPR-202ENST00000451586 HERVK_113P62684 666 aa28.64■■■□□ 2.18
TPR-202ENST00000451586 BCRP11274 1271 aa28.63■■■□□ 2.17
TPR-202ENST00000451586 MCCP23508 829 aa28.63■■■□□ 2.17
TPR-202ENST00000451586 SP3Q02447 781 aa28.63■■■□□ 2.17
TPR-202ENST00000451586 COG2Q14746 738 aa28.63■■■□□ 2.17
TPR-202ENST00000451586 ADCK5Q3MIX3 580 aa28.63■■■□□ 2.17
TPR-202ENST00000451586 IFIT3O14879 490 aaKnown RBP28.62■■■□□ 2.17
TPR-202ENST00000451586 FLOT1O75955 427 aa28.62■■■□□ 2.17
TPR-202ENST00000451586 SEC24BO95487 1268 aa28.62■■■□□ 2.17
TPR-202ENST00000451586 SEC23AQ15436 765 aa28.62■■■□□ 2.17
TPR-202ENST00000451586 C8orf34Q49A92 452 aa28.62■■■□□ 2.17
TPR-202ENST00000451586 ANKRD13CQ8N6S4 541 aa28.62■■■□□ 2.17
TPR-202ENST00000451586 NEK1Q96PY6 1258 aa28.62■■■□□ 2.17
TPR-202ENST00000451586 PRDM10Q9NQV6 1147 aa28.62■■■□□ 2.17
TPR-202ENST00000451586 FBXO28Q9NVF7 368 aa28.62■■■□□ 2.17
TPR-202ENST00000451586 SNX14Q9Y5W7 946 aa28.62■■■□□ 2.17
TPR-202ENST00000451586 PEX10O60683 326 aa28.61■■■□□ 2.17
TPR-202ENST00000451586 BMP3P12645 472 aa28.61■■■□□ 2.17
TPR-202ENST00000451586 GCLCP48506 637 aaPredicted RBP28.61■■■□□ 2.17
TPR-202ENST00000451586 POTEEQ6S8J3 1075 aa28.61■■■□□ 2.17
TPR-202ENST00000451586 SAMD1Q6SPF0 538 aaPredicted RBP28.61■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms