RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 OTUD7BQ6GQQ9 843 aa9.67□□□□□ -0.86
LSM5-208ENST00000450169 C6orf89Q6UWU4 347 aa9.67□□□□□ -0.86
LSM5-208ENST00000450169 KDM7AQ6ZMT4 941 aa9.67□□□□□ -0.86
LSM5-208ENST00000450169 UBE3BQ7Z3V4 1068 aa9.67□□□□□ -0.86
LSM5-208ENST00000450169 FOXP4Q8IVH2 680 aaPredicted RBP9.67□□□□□ -0.86
LSM5-208ENST00000450169 TRMT44Q8IYL2 757 aaKnown RBP9.67□□□□□ -0.86
LSM5-208ENST00000450169 RASSF8Q8NHQ8 419 aa9.67□□□□□ -0.86
LSM5-208ENST00000450169 MYCBPAPQ8TBZ2 947 aa9.67□□□□□ -0.86
LSM5-208ENST00000450169 CCDC51Q96ER9 411 aa9.67□□□□□ -0.86
LSM5-208ENST00000450169 COG3Q96JB2 828 aa9.67□□□□□ -0.86
LSM5-208ENST00000450169 CCT8L2Q96SF2 557 aa9.67□□□□□ -0.86
LSM5-208ENST00000450169 HDAC6Q9UBN7 1215 aa9.67□□□□□ -0.86
LSM5-208ENST00000450169 PES1O00541 588 aaKnown RBP9.66□□□□□ -0.86
LSM5-208ENST00000450169 TEX33O43247 280 aa9.66□□□□□ -0.86
LSM5-208ENST00000450169 HSF2BPO75031 334 aa9.66□□□□□ -0.86
LSM5-208ENST00000450169 FAM107AO95990 144 aa9.66□□□□□ -0.86
LSM5-208ENST00000450169 FDPSP14324 419 aaKnown RBP9.66□□□□□ -0.86
LSM5-208ENST00000450169 CASP14P31944 242 aa9.66□□□□□ -0.86
LSM5-208ENST00000450169 CEBPAP49715 358 aaPredicted RBP9.66□□□□□ -0.86
LSM5-208ENST00000450169 RAB27AP51159 221 aa9.66□□□□□ -0.86
LSM5-208ENST00000450169 GUCY1A3Q02108 690 aa9.66□□□□□ -0.86
LSM5-208ENST00000450169 SLC5A9Q2M3M2 681 aa9.66□□□□□ -0.86
LSM5-208ENST00000450169 ACCSLQ4AC99 568 aa9.66□□□□□ -0.86
LSM5-208ENST00000450169 FILIP1LQ4L180 1135 aa9.66□□□□□ -0.86
LSM5-208ENST00000450169 SPECC1Q5M775 1068 aa9.66□□□□□ -0.86
LSM5-208ENST00000450169 ALS2CLQ60I27 953 aa9.66□□□□□ -0.86
LSM5-208ENST00000450169 CAPRIN2Q6IMN6 1127 aaKnown RBP9.66□□□□□ -0.86
LSM5-208ENST00000450169 CCDC70Q6NSX1 233 aa9.66□□□□□ -0.86
LSM5-208ENST00000450169 SHC4Q6S5L8 630 aa9.66□□□□□ -0.86
LSM5-208ENST00000450169 DHX32Q7L7V1 743 aaKnown RBP9.66□□□□□ -0.86
LSM5-208ENST00000450169 NLRP14Q86W24 1093 aa9.66□□□□□ -0.86
LSM5-208ENST00000450169 TMTC1Q8IUR5 882 aa9.66□□□□□ -0.86
LSM5-208ENST00000450169 SH2D3CQ8N5H7 860 aa9.66□□□□□ -0.86
LSM5-208ENST00000450169 C8orf76Q96K31 380 aa9.66□□□□□ -0.86
LSM5-208ENST00000450169 CAPZA3Q96KX2 299 aa9.66□□□□□ -0.86
LSM5-208ENST00000450169 RNPC3Q96LT9 517 aaKnown RBP9.66□□□□□ -0.86
LSM5-208ENST00000450169 SLC39A2Q9NP94 309 aa9.66□□□□□ -0.86
LSM5-208ENST00000450169 SAMSN1Q9NSI8 373 aaKnown RBP9.66□□□□□ -0.86
LSM5-208ENST00000450169 DACH1Q9UI36 760 aa9.66□□□□□ -0.86
LSM5-208ENST00000450169 WWC3Q9ULE0 1092 aa9.66□□□□□ -0.86
LSM5-208ENST00000450169 METP08581 1390 aa9.66□□□□□ -0.86
LSM5-208ENST00000450169 C3P01024 1663 aa9.66□□□□□ -0.86
LSM5-208ENST00000450169 SRGAP2O75044 1071 aa9.66□□□□□ -0.86
LSM5-208ENST00000450169 A1BGP04217 495 aa9.66□□□□□ -0.86
LSM5-208ENST00000450169 NNTQ13423 1086 aa9.66□□□□□ -0.86
LSM5-208ENST00000450169 SNX1Q13596 522 aa9.66□□□□□ -0.86
LSM5-208ENST00000450169 SLC39A14Q15043 492 aa9.66□□□□□ -0.86
LSM5-208ENST00000450169 CCDC102BQ68D86 513 aa9.66□□□□□ -0.86
LSM5-208ENST00000450169 MLKLQ8NB16 471 aa9.66□□□□□ -0.86
LSM5-208ENST00000450169 CAGE1Q8TC20 777 aa9.66□□□□□ -0.86
LSM5-208ENST00000450169 NSMCE1Q8WV22 266 aa9.66□□□□□ -0.86
LSM5-208ENST00000450169 BOLA2Q9H3K6 86 aa9.66□□□□□ -0.86
LSM5-208ENST00000450169 GUCA1BQ9UMX6 200 aa9.66□□□□□ -0.86
LSM5-208ENST00000450169 COL15A1P39059 1388 aa9.66□□□□□ -0.86
LSM5-208ENST00000450169 BUB1BO60566 1050 aaPredicted RBP9.65□□□□□ -0.86
LSM5-208ENST00000450169 ATP1A1P05023 1023 aaKnown RBP9.65□□□□□ -0.86
LSM5-208ENST00000450169 PDIA3P30101 505 aaKnown RBP9.65□□□□□ -0.86
LSM5-208ENST00000450169 SEC24CP53992 1094 aa9.65□□□□□ -0.86
LSM5-208ENST00000450169 ERVK-24P63145 666 aa9.65□□□□□ -0.86
LSM5-208ENST00000450169 PSMD2Q13200 908 aa9.65□□□□□ -0.86
LSM5-208ENST00000450169 LONRF3Q496Y0 759 aa9.65□□□□□ -0.86
LSM5-208ENST00000450169 KCTD16Q68DU8 428 aa9.65□□□□□ -0.86
LSM5-208ENST00000450169 IQCEQ6IPM2 695 aa9.65□□□□□ -0.86
LSM5-208ENST00000450169 BZW1Q7L1Q6 419 aaKnown RBP9.65□□□□□ -0.86
LSM5-208ENST00000450169 WAPLQ7Z5K2 1190 aa9.65□□□□□ -0.86
LSM5-208ENST00000450169 TCP11Q8WWU5 503 aa9.65□□□□□ -0.86
LSM5-208ENST00000450169 RBM33Q96EV2 1170 aaKnown RBP9.65□□□□□ -0.86
LSM5-208ENST00000450169 PAIP2Q9BPZ3 127 aaKnown RBP9.65□□□□□ -0.86
LSM5-208ENST00000450169 RIPOR2Q9Y4F9 1068 aa9.65□□□□□ -0.86
LSM5-208ENST00000450169 RPS6KL1Q9Y6S9 549 aa9.65□□□□□ -0.86
LSM5-208ENST00000450169 FER1L4A9Z1Z3 1794 aa9.65□□□□□ -0.86
LSM5-208ENST00000450169 ZMYM6O95789 1325 aa9.65□□□□□ -0.86
LSM5-208ENST00000450169 OVOS2A0A0G2JMS6 1433 aa9.65□□□□□ -0.86
LSM5-208ENST00000450169 OVOS2A0A0J9YW53 1432 aa9.65□□□□□ -0.86
LSM5-208ENST00000450169 OVOS2Q6IE36 1432 aa9.65□□□□□ -0.86
LSM5-208ENST00000450169 DLC1Q96QB1 1528 aa9.65□□□□□ -0.86
LSM5-208ENST00000450169 CACNA1FO60840 1977 aa9.65□□□□□ -0.87
LSM5-208ENST00000450169 FAM237AA0A1B0GTK4 181 aa9.65□□□□□ -0.87
LSM5-208ENST00000450169 DNM1LO00429 736 aa9.65□□□□□ -0.87
LSM5-208ENST00000450169 FOXO3O43524 673 aa9.65□□□□□ -0.87
LSM5-208ENST00000450169 MGRN1O60291 552 aa9.65□□□□□ -0.87
LSM5-208ENST00000450169 GYPCP04921 128 aa9.65□□□□□ -0.87
LSM5-208ENST00000450169 ARID4AP29374 1257 aaPredicted RBP9.65□□□□□ -0.87
LSM5-208ENST00000450169 TIE1P35590 1138 aa9.65□□□□□ -0.87
LSM5-208ENST00000450169 PBX1P40424 430 aa9.65□□□□□ -0.87
LSM5-208ENST00000450169 FXR1P51114 621 aaKnown RBP eCLIP9.65□□□□□ -0.87
LSM5-208ENST00000450169 TSR1Q2NL82 804 aaKnown RBP9.65□□□□□ -0.87
LSM5-208ENST00000450169 ANKRD20A8PQ5CZ79 823 aa9.65□□□□□ -0.87
LSM5-208ENST00000450169 PAPD7Q5XG87 772 aaKnown RBP9.65□□□□□ -0.87
LSM5-208ENST00000450169 MIS18BP1Q6P0N0 1132 aa9.65□□□□□ -0.87
LSM5-208ENST00000450169 CYP26C1Q6V0L0 522 aa9.65□□□□□ -0.87
LSM5-208ENST00000450169 STOX1Q6ZVD7 989 aa9.65□□□□□ -0.87
LSM5-208ENST00000450169 CCDC47Q96A33 483 aaKnown RBP9.65□□□□□ -0.87
LSM5-208ENST00000450169 TBC1D31Q96DN5 1066 aa9.65□□□□□ -0.87
LSM5-208ENST00000450169 SPAG5Q96R06 1193 aa9.65□□□□□ -0.87
LSM5-208ENST00000450169 SLF1Q9BQI6 1058 aa9.65□□□□□ -0.87
LSM5-208ENST00000450169 AGXT2Q9BYV1 514 aa9.65□□□□□ -0.87
LSM5-208ENST00000450169 MAN1B1Q9UKM7 699 aa9.65□□□□□ -0.87
LSM5-208ENST00000450169 NCAPD2Q15021 1401 aa9.64□□□□□ -0.87
LSM5-208ENST00000450169 SPDYE5A6NIY4 337 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms