RNA–Protein interactions for RNA: ENST00000448497.1

RFC4-209, Transcript of replication factor C subunit 4, humanhuman

TSL 5

Gene RFC4, Length 453 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-209ENST00000448497 TNKSO95271 1327 aa8.04□□□□□ -1.12
RFC4-209ENST00000448497 MYO3BQ8WXR4 1341 aa8.04□□□□□ -1.12
RFC4-209ENST00000448497 FER1L6Q2WGJ9 1857 aa8.04□□□□□ -1.12
RFC4-209ENST00000448497 SOWAHBA6NEL2 793 aa8.04□□□□□ -1.12
RFC4-209ENST00000448497 GOLGA6L3A6NEY3 463 aa8.04□□□□□ -1.12
RFC4-209ENST00000448497 FMNL1O95466 1100 aaPredicted RBP8.04□□□□□ -1.12
RFC4-209ENST00000448497 CDC27P30260 824 aa8.04□□□□□ -1.12
RFC4-209ENST00000448497 ADD1P35611 737 aaKnown RBP8.04□□□□□ -1.12
RFC4-209ENST00000448497 IARSP41252 1262 aaKnown RBP8.04□□□□□ -1.12
RFC4-209ENST00000448497 BTDP43251 543 aa8.04□□□□□ -1.12
RFC4-209ENST00000448497 USP5P45974 858 aa8.04□□□□□ -1.12
RFC4-209ENST00000448497 GTF2IP78347 998 aa8.04□□□□□ -1.12
RFC4-209ENST00000448497 KIAA2012Q0VF49 1180 aa8.04□□□□□ -1.12
RFC4-209ENST00000448497 TROAPQ12815 778 aa8.04□□□□□ -1.12
RFC4-209ENST00000448497 RTN1Q16799 776 aa8.04□□□□□ -1.12
RFC4-209ENST00000448497 FAM177A1Q8N128 213 aaPredicted RBP8.04□□□□□ -1.12
RFC4-209ENST00000448497 CERS5Q8N5B7 392 aa8.04□□□□□ -1.12
RFC4-209ENST00000448497 FANCBQ8NB91 859 aa8.04□□□□□ -1.12
RFC4-209ENST00000448497 SH3RF3Q8TEJ3 882 aaPredicted RBP8.04□□□□□ -1.12
RFC4-209ENST00000448497 DDX11Q96FC9 970 aa8.04□□□□□ -1.12
RFC4-209ENST00000448497 CHAMP1Q96JM3 812 aa8.04□□□□□ -1.12
RFC4-209ENST00000448497 C8orf76Q96K31 380 aa8.04□□□□□ -1.12
RFC4-209ENST00000448497 ZNF396Q96N95 335 aaPredicted RBP8.04□□□□□ -1.12
RFC4-209ENST00000448497 PSMD1Q99460 953 aa8.04□□□□□ -1.12
RFC4-209ENST00000448497 SENP2Q9HC62 589 aa8.04□□□□□ -1.12
RFC4-209ENST00000448497 RBM28Q9NW13 759 aaKnown RBP8.04□□□□□ -1.12
RFC4-209ENST00000448497 MCM9Q9NXL9 1143 aa8.04□□□□□ -1.12
RFC4-209ENST00000448497 RCOR1Q9UKL0 485 aa8.04□□□□□ -1.12
RFC4-209ENST00000448497 NAP1L2Q9ULW6 460 aaPredicted RBP8.04□□□□□ -1.12
RFC4-209ENST00000448497 DAGLAQ9Y4D2 1042 aa8.04□□□□□ -1.12
RFC4-209ENST00000448497 ADAMTSL1Q8N6G6 1762 aa8.03□□□□□ -1.12
RFC4-209ENST00000448497 COL2A1P02458 1487 aaPredicted RBP8.03□□□□□ -1.12
RFC4-209ENST00000448497 PLIN4Q96Q06 1357 aa8.03□□□□□ -1.12
RFC4-209ENST00000448497 CYP2D7A0A087X1C5 515 aa8.03□□□□□ -1.12
RFC4-209ENST00000448497 RANBP6O60518 1105 aaKnown RBP8.03□□□□□ -1.12
RFC4-209ENST00000448497 LETM1O95202 739 aaPredicted RBP8.03□□□□□ -1.12
RFC4-209ENST00000448497 DEXIO95424 95 aa8.03□□□□□ -1.12
RFC4-209ENST00000448497 USP17L8P0C7I0 530 aa8.03□□□□□ -1.12
RFC4-209ENST00000448497 NOVP48745 357 aa8.03□□□□□ -1.12
RFC4-209ENST00000448497 MRE11P49959 708 aa8.03□□□□□ -1.12
RFC4-209ENST00000448497 SSRP1Q08945 709 aaKnown RBP8.03□□□□□ -1.12
RFC4-209ENST00000448497 FUT2Q10981 343 aa8.03□□□□□ -1.12
RFC4-209ENST00000448497 ZSCAN23Q3MJ62 389 aa8.03□□□□□ -1.12
RFC4-209ENST00000448497 RRP12Q5JTH9 1297 aaKnown RBP8.03□□□□□ -1.12
RFC4-209ENST00000448497 RCSD1Q6JBY9 416 aa8.03□□□□□ -1.12
RFC4-209ENST00000448497 CAVIN1Q6NZI2 390 aaKnown RBP8.03□□□□□ -1.12
RFC4-209ENST00000448497 C16orf86Q6ZW13 317 aa8.03□□□□□ -1.12
RFC4-209ENST00000448497 CATIPQ7Z7H3 387 aa8.03□□□□□ -1.12
RFC4-209ENST00000448497 NBPF11Q86T75 865 aa8.03□□□□□ -1.12
RFC4-209ENST00000448497 TTC6Q86TZ1 520 aa8.03□□□□□ -1.12
RFC4-209ENST00000448497 MICU3Q86XE3 530 aa8.03□□□□□ -1.12
RFC4-209ENST00000448497 TEX11Q8IYF3 940 aa8.03□□□□□ -1.12
RFC4-209ENST00000448497 TRIM22Q8IYM9 498 aa8.03□□□□□ -1.12
RFC4-209ENST00000448497 RTKN2Q8IZC4 609 aa8.03□□□□□ -1.12
RFC4-209ENST00000448497 CRACR2BQ8N4Y2 399 aaPredicted RBP8.03□□□□□ -1.12
RFC4-209ENST00000448497 LEO1Q8WVC0 666 aaPredicted RBP8.03□□□□□ -1.12
RFC4-209ENST00000448497 ZDHHC15Q96MV8 337 aa8.03□□□□□ -1.12
RFC4-209ENST00000448497 RNF26Q9BY78 433 aaPredicted RBP8.03□□□□□ -1.12
RFC4-209ENST00000448497 GZF1Q9H116 711 aaPredicted RBP8.03□□□□□ -1.12
RFC4-209ENST00000448497 KDM4CQ9H3R0 1056 aa8.03□□□□□ -1.12
RFC4-209ENST00000448497 TOMM22Q9NS69 142 aa8.03□□□□□ -1.12
RFC4-209ENST00000448497 POLR3EQ9NVU0 708 aa8.03□□□□□ -1.12
RFC4-209ENST00000448497 TMEM63CQ9P1W3 806 aa8.03□□□□□ -1.12
RFC4-209ENST00000448497 JAG2Q9Y219 1238 aa8.03□□□□□ -1.12
RFC4-209ENST00000448497 FLT1P17948 1338 aa8.03□□□□□ -1.12
RFC4-209ENST00000448497 SIPA1L1O43166 1804 aa8.02□□□□□ -1.13
RFC4-209ENST00000448497 USP17L3A6NCW0 530 aa8.02□□□□□ -1.13
RFC4-209ENST00000448497 USP17L4A6NCW7 530 aa8.02□□□□□ -1.13
RFC4-209ENST00000448497 SMIM22K7EJ46 135 aa8.02□□□□□ -1.13
RFC4-209ENST00000448497 PRPF3O43395 683 aaKnown RBP8.02□□□□□ -1.13
RFC4-209ENST00000448497 FIBPO43427 364 aa8.02□□□□□ -1.13
RFC4-209ENST00000448497 GADD45BO75293 160 aaPredicted RBP8.02□□□□□ -1.13
RFC4-209ENST00000448497 YEATS4O95619 227 aa8.02□□□□□ -1.13
RFC4-209ENST00000448497 CYP2D6P10635 497 aa8.02□□□□□ -1.13
RFC4-209ENST00000448497 U2AF2P26368 475 aaKnown RBP eCLIP8.02□□□□□ -1.134e-7■■□□□ 12.4
RFC4-209ENST00000448497 CHRNA5P30532 468 aa8.02□□□□□ -1.13
RFC4-209ENST00000448497 SSTR3P32745 418 aaPredicted RBP8.02□□□□□ -1.13
RFC4-209ENST00000448497 TGFB2P61812 414 aa8.02□□□□□ -1.13
RFC4-209ENST00000448497 DACT2Q5SW24 774 aa8.02□□□□□ -1.13
RFC4-209ENST00000448497 IFIT1BQ5T764 474 aaKnown RBP8.02□□□□□ -1.13
RFC4-209ENST00000448497 SOGA3Q5TF21 947 aa8.02□□□□□ -1.13
RFC4-209ENST00000448497 OLFM4Q6UX06 510 aa8.02□□□□□ -1.13
RFC4-209ENST00000448497 USP17L1Q7RTZ2 530 aa8.02□□□□□ -1.13
RFC4-209ENST00000448497 DEFB132Q7Z7B7 95 aa8.02□□□□□ -1.13
RFC4-209ENST00000448497 FERMT3Q86UX7 667 aa8.02□□□□□ -1.13
RFC4-209ENST00000448497 TTLL6Q8N841 843 aa8.02□□□□□ -1.13
RFC4-209ENST00000448497 NEDD1Q8NHV4 660 aa8.02□□□□□ -1.13
RFC4-209ENST00000448497 TGFBRAP1Q8WUH2 860 aa8.02□□□□□ -1.13
RFC4-209ENST00000448497 NLRP7Q8WX94 980 aa8.02□□□□□ -1.13
RFC4-209ENST00000448497 TEKT1Q969V4 418 aa8.02□□□□□ -1.13
RFC4-209ENST00000448497 SPATA32Q96LK8 384 aa8.02□□□□□ -1.13
RFC4-209ENST00000448497 ALG1Q9BT22 464 aa8.02□□□□□ -1.13
RFC4-209ENST00000448497 REPIN1Q9BWE0 567 aaKnown RBP8.02□□□□□ -1.13
RFC4-209ENST00000448497 GDPD2Q9HCC8 539 aa8.02□□□□□ -1.13
RFC4-209ENST00000448497 RTEL1Q9NZ71 1219 aa8.02□□□□□ -1.13
RFC4-209ENST00000448497 MORC2Q9Y6X9 1032 aaPredicted RBP8.02□□□□□ -1.13
RFC4-209ENST00000448497 MYH4Q9Y623 1939 aa8.01□□□□□ -1.13
RFC4-209ENST00000448497 ARFGEF1Q9Y6D6 1849 aa8.01□□□□□ -1.13
RFC4-209ENST00000448497 ECE2O60344 883 aa8.01□□□□□ -1.13
RFC4-209ENST00000448497 WDHD1O75717 1129 aaPredicted RBP8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 136.1 ms