RNA–Protein interactions for RNA: ENST00000448471.2

CDK3-202, Transcript of cyclin dependent kinase 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDK3, Length 1,570 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3-202ENST00000448471 DEFB123Q8N688 67 aa17.16■□□□□ 0.34
CDK3-202ENST00000448471 NBPF3Q9H094 633 aa17.16■□□□□ 0.34
CDK3-202ENST00000448471 HMX1Q9NP08 348 aaPredicted RBP17.16■□□□□ 0.34
CDK3-202ENST00000448471 MROH7-TTC4A0A0A0MT08 1334 aa17.16■□□□□ 0.34
CDK3-202ENST00000448471 RPTORQ8N122 1335 aa17.16■□□□□ 0.34
CDK3-202ENST00000448471 TBC1D12O60347 775 aa17.15■□□□□ 0.34
CDK3-202ENST00000448471 FGAP02671 866 aa17.15■□□□□ 0.34
CDK3-202ENST00000448471 SYN1P17600 705 aa17.15■□□□□ 0.34
CDK3-202ENST00000448471 GCLCP48506 637 aaPredicted RBP17.15■□□□□ 0.34
CDK3-202ENST00000448471 SPP2Q13103 211 aa17.15■□□□□ 0.34
CDK3-202ENST00000448471 ALX1Q15699 326 aa17.15■□□□□ 0.34
CDK3-202ENST00000448471 IMMTQ16891 758 aaKnown RBP17.15■□□□□ 0.34
CDK3-202ENST00000448471 MAGEB6Q8N7X4 407 aa17.15■□□□□ 0.34
CDK3-202ENST00000448471 OSBPL5Q9H0X9 879 aaPredicted RBP17.15■□□□□ 0.34
CDK3-202ENST00000448471 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.15■□□□□ 0.342e-6■□□□□ 8.3
CDK3-202ENST00000448471 LRP2BPQ9P2M1 347 aa17.15■□□□□ 0.34
CDK3-202ENST00000448471 ZMYM6O95789 1325 aa17.15■□□□□ 0.34
CDK3-202ENST00000448471 MYO5AQ9Y4I1 1855 aaKnown RBP17.15■□□□□ 0.34
CDK3-202ENST00000448471 HMGCS2P54868 508 aa17.15■□□□□ 0.34
CDK3-202ENST00000448471 RHBDL3P58872 404 aa17.15■□□□□ 0.34
CDK3-202ENST00000448471 PABPC4Q13310 644 aaKnown RBP eCLIP17.15■□□□□ 0.34
CDK3-202ENST00000448471 CLEC17AQ6ZS10 378 aa17.15■□□□□ 0.34
CDK3-202ENST00000448471 NOL8Q76FK4 1167 aaKnown RBP17.15■□□□□ 0.34
CDK3-202ENST00000448471 Q7L0L9 218 aa17.15■□□□□ 0.34
CDK3-202ENST00000448471 ZNF280CQ8ND82 737 aa17.15■□□□□ 0.34
CDK3-202ENST00000448471 STRBPQ96SI9 672 aaKnown RBP17.15■□□□□ 0.34
CDK3-202ENST00000448471 C11orf49Q9H6J7 331 aa17.15■□□□□ 0.34
CDK3-202ENST00000448471 GJD2Q9UKL4 321 aa17.15■□□□□ 0.34
CDK3-202ENST00000448471 LOC285556D6RIA3 1793 aa17.14■□□□□ 0.33
CDK3-202ENST00000448471 LRIT3Q3SXY7 679 aa17.14■□□□□ 0.33
CDK3-202ENST00000448471 SPTY2D1Q68D10 685 aaPredicted RBP17.14■□□□□ 0.33
CDK3-202ENST00000448471 TNPO1Q92973 898 aaKnown RBP17.14■□□□□ 0.33
CDK3-202ENST00000448471 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.14■□□□□ 0.33
CDK3-202ENST00000448471 DDX60LQ5H9U9 1706 aaKnown RBP17.13■□□□□ 0.33
CDK3-202ENST00000448471 GPR75-ASB3A0A0A6YYF3 556 aa17.13■□□□□ 0.33
CDK3-202ENST00000448471 E7EWF7 191 aa17.13■□□□□ 0.33
CDK3-202ENST00000448471 GNAT2P19087 354 aa17.13■□□□□ 0.33
CDK3-202ENST00000448471 MAGEA10P43363 369 aaPredicted RBP17.13■□□□□ 0.33
CDK3-202ENST00000448471 STOX1Q6ZVD7 989 aa17.13■□□□□ 0.33
CDK3-202ENST00000448471 DHX32Q7L7V1 743 aaKnown RBP17.13■□□□□ 0.33
CDK3-202ENST00000448471 TDHQ8IZJ6 230 aa17.13■□□□□ 0.33
CDK3-202ENST00000448471 ASCC2Q9H1I8 757 aaPredicted RBP17.13■□□□□ 0.33
CDK3-202ENST00000448471 PATL2C9JE40 543 aaKnown RBP17.12■□□□□ 0.33
CDK3-202ENST00000448471 NPM3O75607 178 aaKnown RBP17.12■□□□□ 0.33
CDK3-202ENST00000448471 MCM4P33991 863 aa17.12■□□□□ 0.33
CDK3-202ENST00000448471 MECOMQ03112 1051 aa17.12■□□□□ 0.33
CDK3-202ENST00000448471 TOB2Q14106 344 aaPredicted RBP17.12■□□□□ 0.33
CDK3-202ENST00000448471 FBXL16Q8N461 479 aa17.12■□□□□ 0.33
CDK3-202ENST00000448471 TRIB2Q92519 343 aa17.12■□□□□ 0.33
CDK3-202ENST00000448471 GBP4Q96PP9 640 aa17.12■□□□□ 0.33
CDK3-202ENST00000448471 OGDHLQ9ULD0 1010 aa17.12■□□□□ 0.33
CDK3-202ENST00000448471 STXBP5LQ9Y2K9 1186 aa17.12■□□□□ 0.33
CDK3-202ENST00000448471 DOCK3Q8IZD9 2030 aa17.12■□□□□ 0.33
CDK3-202ENST00000448471 CAP2P40123 477 aa17.11■□□□□ 0.33
CDK3-202ENST00000448471 EXOSC10Q01780 885 aaKnown RBP17.11■□□□□ 0.33
CDK3-202ENST00000448471 COL9A3Q14050 684 aaPredicted RBP17.11■□□□□ 0.33
CDK3-202ENST00000448471 ZNF384Q8TF68 577 aa17.11■□□□□ 0.33
CDK3-202ENST00000448471 AGXT2Q9BYV1 514 aa17.11■□□□□ 0.33
CDK3-202ENST00000448471 MORF4L1Q9UBU8 362 aa17.11■□□□□ 0.33
CDK3-202ENST00000448471 COL6A3P12111 3177 aa17.11■□□□□ 0.33
CDK3-202ENST00000448471 COL2A1P02458 1487 aaPredicted RBP17.11■□□□□ 0.33
CDK3-202ENST00000448471 USP17L5A8MUK1 530 aa17.11■□□□□ 0.33
CDK3-202ENST00000448471 ZNF213O14771 459 aa17.11■□□□□ 0.33
CDK3-202ENST00000448471 MBD4O95243 580 aa17.11■□□□□ 0.33
CDK3-202ENST00000448471 CYP2B6P20813 491 aa17.11■□□□□ 0.33
CDK3-202ENST00000448471 SH3D19Q5HYK7 790 aa17.11■□□□□ 0.33
CDK3-202ENST00000448471 UBE2OQ9C0C9 1292 aaKnown RBP17.11■□□□□ 0.33
CDK3-202ENST00000448471 AS3MTQ9HBK9 375 aa17.11■□□□□ 0.33
CDK3-202ENST00000448471 MTMR10Q9NXD2 777 aa17.11■□□□□ 0.33
CDK3-202ENST00000448471 TPCN1Q9ULQ1 816 aa17.11■□□□□ 0.33
CDK3-202ENST00000448471 PFASO15067 1338 aa17.1■□□□□ 0.33
CDK3-202ENST00000448471 CYP7A1P22680 504 aa17.1■□□□□ 0.33
CDK3-202ENST00000448471 RRP1BQ14684 758 aaKnown RBP17.1■□□□□ 0.33
CDK3-202ENST00000448471 ME3Q16798 604 aa17.1■□□□□ 0.33
CDK3-202ENST00000448471 RAI14Q9P0K7 980 aa17.1■□□□□ 0.33
CDK3-202ENST00000448471 WDR19Q8NEZ3 1342 aa17.09■□□□□ 0.33
CDK3-202ENST00000448471 LARGE1O95461 756 aa17.09■□□□□ 0.33
CDK3-202ENST00000448471 PRKAR2AP13861 404 aaKnown RBP17.09■□□□□ 0.33
CDK3-202ENST00000448471 IRX3P78415 501 aaPredicted RBP17.09■□□□□ 0.33
CDK3-202ENST00000448471 MAP3K21Q5TCX8 1036 aa17.09■□□□□ 0.33
CDK3-202ENST00000448471 PLXNB2O15031 1838 aa17.09■□□□□ 0.33
CDK3-202ENST00000448471 DDX11L8A8MPP1 907 aa17.08■□□□□ 0.32
CDK3-202ENST00000448471 LDHCP07864 332 aa17.08■□□□□ 0.32
CDK3-202ENST00000448471 GSTO1P78417 241 aa17.08■□□□□ 0.32
CDK3-202ENST00000448471 Q6ZUG5 572 aa17.08■□□□□ 0.32
CDK3-202ENST00000448471 NSUN4Q96CB9 384 aaKnown RBP17.08■□□□□ 0.32
CDK3-202ENST00000448471 NUDT12Q9BQG2 462 aa17.08■□□□□ 0.32
CDK3-202ENST00000448471 LARP6Q9BRS8 491 aaKnown RBP17.08■□□□□ 0.32
CDK3-202ENST00000448471 NACAP1Q9BZK3 213 aa17.08■□□□□ 0.32
CDK3-202ENST00000448471 ARMT1Q9H993 441 aa17.08■□□□□ 0.32
CDK3-202ENST00000448471 ATAD5Q96QE3 1844 aa17.08■□□□□ 0.32
CDK3-202ENST00000448471 LAMA4Q16363 1823 aa17.07■□□□□ 0.32
CDK3-202ENST00000448471 GSG1L2A8MUP6 293 aa17.07■□□□□ 0.32
CDK3-202ENST00000448471 BRD1O95696 1058 aa17.07■□□□□ 0.32
CDK3-202ENST00000448471 APPP05067 770 aa17.07■□□□□ 0.32
CDK3-202ENST00000448471 PDIA4P13667 645 aaKnown RBP17.07■□□□□ 0.32
CDK3-202ENST00000448471 PTMSP20962 102 aa17.07■□□□□ 0.32
CDK3-202ENST00000448471 MTMR2Q13614 643 aa17.07■□□□□ 0.32
CDK3-202ENST00000448471 NAA16Q6N069 864 aaPredicted RBP17.07■□□□□ 0.32
CDK3-202ENST00000448471 IFNL3Q8IZI9 196 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms