RNA–Protein interactions for RNA: ENST00000448192.1

DDX56-207, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-207ENST00000448192 GPR142Q7Z601 462 aa21.19■□□□□ 0.98
DDX56-207ENST00000448192 PLEKHH3Q7Z736 793 aa21.19■□□□□ 0.98
DDX56-207ENST00000448192 SOCS4Q8WXH5 440 aa21.19■□□□□ 0.98
DDX56-207ENST00000448192 DEFB118Q96PH6 123 aa21.19■□□□□ 0.98
DDX56-207ENST00000448192 SEC62Q99442 399 aaKnown RBP21.19■□□□□ 0.98
DDX56-207ENST00000448192 TMX2Q9Y320 296 aa21.19■□□□□ 0.98
DDX56-207ENST00000448192 COG2Q14746 738 aa21.18■□□□□ 0.98
DDX56-207ENST00000448192 LBX2Q6XYB7 198 aa21.18■□□□□ 0.98
DDX56-207ENST00000448192 SPICE1Q8N0Z3 855 aa21.18■□□□□ 0.98
DDX56-207ENST00000448192 MKNK2Q9HBH9 465 aa21.18■□□□□ 0.98
DDX56-207ENST00000448192 EPB41L4AQ9HCS5 686 aaPredicted RBP21.18■□□□□ 0.98
DDX56-207ENST00000448192 BTBD7Q9P203 1132 aa21.18■□□□□ 0.98
DDX56-207ENST00000448192 SALL3Q9BXA9 1300 aa21.18■□□□□ 0.98
DDX56-207ENST00000448192 RLFQ13129 1914 aa21.17■□□□□ 0.98
DDX56-207ENST00000448192 TFRCP02786 760 aaKnown RBP21.17■□□□□ 0.98
DDX56-207ENST00000448192 EEF2P13639 858 aaKnown RBP21.17■□□□□ 0.98
DDX56-207ENST00000448192 TRIM32Q13049 653 aa21.17■□□□□ 0.98
DDX56-207ENST00000448192 AAMPQ13685 434 aa21.17■□□□□ 0.98
DDX56-207ENST00000448192 TRIB2Q92519 343 aa21.17■□□□□ 0.98
DDX56-207ENST00000448192 LPAR1Q92633 364 aa21.17■□□□□ 0.98
DDX56-207ENST00000448192 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.17■□□□□ 0.989e-6■■□□□ 13.2
DDX56-207ENST00000448192 VCPKMTQ9H867 229 aa21.17■□□□□ 0.98
DDX56-207ENST00000448192 KANSL2Q9H9L4 492 aa21.17■□□□□ 0.98
DDX56-207ENST00000448192 PAK6Q9NQU5 681 aaPredicted RBP21.17■□□□□ 0.98
DDX56-207ENST00000448192 HOXC10Q9NYD6 342 aa21.17■□□□□ 0.98
DDX56-207ENST00000448192 PATL2C9JE40 543 aaKnown RBP21.16■□□□□ 0.98
DDX56-207ENST00000448192 ZMYM1Q5SVZ6 1142 aa21.16■□□□□ 0.98
DDX56-207ENST00000448192 SAMD1Q6SPF0 538 aaPredicted RBP21.16■□□□□ 0.98
DDX56-207ENST00000448192 IFNL3Q8IZI9 196 aa21.16■□□□□ 0.98
DDX56-207ENST00000448192 GREB1LQ9C091 1923 aaPredicted RBP21.16■□□□□ 0.98
DDX56-207ENST00000448192 PARP14Q460N5 1801 aa21.15■□□□□ 0.98
DDX56-207ENST00000448192 RAD21O60216 631 aa21.15■□□□□ 0.98
DDX56-207ENST00000448192 FLOT1O75955 427 aa21.15■□□□□ 0.98
DDX56-207ENST00000448192 XRCC5P13010 732 aaKnown RBP21.15■□□□□ 0.98
DDX56-207ENST00000448192 RASA1P20936 1047 aa21.15■□□□□ 0.98
DDX56-207ENST00000448192 RGS2P41220 211 aa21.15■□□□□ 0.98
DDX56-207ENST00000448192 PDE1AP54750 535 aa21.15■□□□□ 0.98
DDX56-207ENST00000448192 MORN1Q5T089 497 aa21.15■□□□□ 0.98
DDX56-207ENST00000448192 USP6NLQ92738 828 aa21.15■□□□□ 0.98
DDX56-207ENST00000448192 NACAP1Q9BZK3 213 aa21.15■□□□□ 0.98
DDX56-207ENST00000448192 HMX1Q9NP08 348 aaPredicted RBP21.15■□□□□ 0.98
DDX56-207ENST00000448192 STAP2Q9UGK3 403 aa21.15■□□□□ 0.98
DDX56-207ENST00000448192 ROBO3Q96MS0 1386 aa21.14■□□□□ 0.98
DDX56-207ENST00000448192 RPTORQ8N122 1335 aa21.14■□□□□ 0.97
DDX56-207ENST00000448192 FARP2O94887 1054 aaPredicted RBP21.14■□□□□ 0.97
DDX56-207ENST00000448192 ZKSCAN1P17029 563 aaPredicted RBP21.14■□□□□ 0.97
DDX56-207ENST00000448192 B4GALNT3Q6L9W6 998 aa21.14■□□□□ 0.97
DDX56-207ENST00000448192 TRMT44Q8IYL2 757 aaKnown RBP21.14■□□□□ 0.97
DDX56-207ENST00000448192 EXOC6Q8TAG9 804 aa21.14■□□□□ 0.97
DDX56-207ENST00000448192 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.14■□□□□ 0.97
DDX56-207ENST00000448192 LNPKQ9C0E8 428 aa21.14■□□□□ 0.97
DDX56-207ENST00000448192 RWDD1Q9H446 243 aaPredicted RBP21.14■□□□□ 0.97
DDX56-207ENST00000448192 GOPCQ9HD26 462 aa21.14■□□□□ 0.97
DDX56-207ENST00000448192 IVNS1ABPQ9Y6Y0 642 aa21.14■□□□□ 0.97
DDX56-207ENST00000448192 A0A0G2JMZ2 1700 aa21.14■□□□□ 0.97
DDX56-207ENST00000448192 WDR46O15213 610 aaKnown RBP21.13■□□□□ 0.97
DDX56-207ENST00000448192 PRKAR2AP13861 404 aaKnown RBP21.13■□□□□ 0.97
DDX56-207ENST00000448192 MAP2K5Q13163 448 aa21.13■□□□□ 0.97
DDX56-207ENST00000448192 CCL14Q16627 93 aa21.13■□□□□ 0.97
DDX56-207ENST00000448192 UBE2Q1Q7Z7E8 422 aa21.13■□□□□ 0.97
DDX56-207ENST00000448192 DPF3Q92784 378 aa21.13■□□□□ 0.97
DDX56-207ENST00000448192 EVI5LQ96CN4 794 aa21.13■□□□□ 0.97
DDX56-207ENST00000448192 APBA2Q99767 749 aa21.13■□□□□ 0.97
DDX56-207ENST00000448192 MYH4Q9Y623 1939 aa21.13■□□□□ 0.97
DDX56-207ENST00000448192 COL11A1P12107 1806 aaPredicted RBP21.13■□□□□ 0.97
DDX56-207ENST00000448192 SLC15A5A6NIM6 579 aa21.12■□□□□ 0.97
DDX56-207ENST00000448192 PRDM1O75626 825 aa21.12■□□□□ 0.97
DDX56-207ENST00000448192 PTPREP23469 700 aa21.12■□□□□ 0.97
DDX56-207ENST00000448192 DSG3P32926 999 aa21.12■□□□□ 0.97
DDX56-207ENST00000448192 PLS1Q14651 629 aa21.12■□□□□ 0.97
DDX56-207ENST00000448192 ZNF444Q8N0Y2 327 aaPredicted RBP21.12■□□□□ 0.97
DDX56-207ENST00000448192 ATG4CQ96DT6 458 aa21.12■□□□□ 0.97
DDX56-207ENST00000448192 MOV10L1Q9BXT6 1211 aaKnown RBP21.12■□□□□ 0.97
DDX56-207ENST00000448192 CRISPLD2Q9H0B8 497 aa21.12■□□□□ 0.97
DDX56-207ENST00000448192 NAPBQ9H115 298 aa21.12■□□□□ 0.97
DDX56-207ENST00000448192 ZNF287Q9HBT7 754 aa21.12■□□□□ 0.97
DDX56-207ENST00000448192 CCDC129Q6ZRS4 1044 aa21.11■□□□□ 0.97
DDX56-207ENST00000448192 MB21D1Q8N884 522 aa21.11■□□□□ 0.97
DDX56-207ENST00000448192 HTATIP2Q9BUP3 242 aa21.11■□□□□ 0.97
DDX56-207ENST00000448192 SPATC1LQ9H0A9 340 aa21.11■□□□□ 0.97
DDX56-207ENST00000448192 CAPN2P17655 700 aa21.1■□□□□ 0.97
DDX56-207ENST00000448192 CACNB2Q08289 660 aaPredicted RBP21.1■□□□□ 0.97
DDX56-207ENST00000448192 MAP3K21Q5TCX8 1036 aa21.1■□□□□ 0.97
DDX56-207ENST00000448192 SMC5Q8IY18 1101 aa21.1■□□□□ 0.97
DDX56-207ENST00000448192 FBXO28Q9NVF7 368 aa21.1■□□□□ 0.97
DDX56-207ENST00000448192 IGHDP01880 384 aa21.09■□□□□ 0.97
DDX56-207ENST00000448192 SLC3A2P08195 630 aaKnown RBP21.09■□□□□ 0.97
DDX56-207ENST00000448192 GRB14Q14449 540 aa21.09■□□□□ 0.97
DDX56-207ENST00000448192 FAM83BQ5T0W9 1011 aa21.09■□□□□ 0.97
DDX56-207ENST00000448192 NYAP2Q9P242 653 aa21.09■□□□□ 0.97
DDX56-207ENST00000448192 CLIP2Q9UDT6 1046 aa21.09■□□□□ 0.97
DDX56-207ENST00000448192 SUPT16HQ9Y5B9 1047 aaKnown RBP21.09■□□□□ 0.97
DDX56-207ENST00000448192 H0YGN5 161 aa21.08■□□□□ 0.97
DDX56-207ENST00000448192 ERCC3P19447 782 aa21.08■□□□□ 0.97
DDX56-207ENST00000448192 PDE4BQ07343 736 aa21.08■□□□□ 0.97
DDX56-207ENST00000448192 PPARAQ07869 468 aa21.08■□□□□ 0.97
DDX56-207ENST00000448192 NCAPG2Q86XI2 1143 aa21.08■□□□□ 0.97
DDX56-207ENST00000448192 SHCBP1Q8NEM2 672 aa21.08■□□□□ 0.97
DDX56-207ENST00000448192 PAWRQ96IZ0 340 aaKnown RBP21.08■□□□□ 0.97
DDX56-207ENST00000448192 TRIM6-TRIM34B2RNG4 842 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms