RNA–Protein interactions for RNA: ENST00000448116.6

SHC1-210, Transcript of SHC adaptor protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SHC1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-210ENST00000448116 EP400NLQ6ZTU2 488 aa14.63□□□□□ -0.07
SHC1-210ENST00000448116 ARFGAP3Q9NP61 516 aa14.63□□□□□ -0.07
SHC1-210ENST00000448116 INTS5Q6P9B9 1019 aaKnown RBP14.62□□□□□ -0.07
SHC1-210ENST00000448116 GPR161Q8N6U8 529 aaKnown RBP14.62□□□□□ -0.07
SHC1-210ENST00000448116 GOLGA1Q92805 767 aa14.62□□□□□ -0.07
SHC1-210ENST00000448116 ADGRG1Q9Y653 693 aa14.62□□□□□ -0.07
SHC1-210ENST00000448116 PRPF3O43395 683 aaKnown RBP14.62□□□□□ -0.07
SHC1-210ENST00000448116 CAVIN4Q5BKX8 364 aa14.62□□□□□ -0.07
SHC1-210ENST00000448116 CC2D1AQ6P1N0 951 aaPredicted RBP14.62□□□□□ -0.07
SHC1-210ENST00000448116 ACRBPQ8NEB7 543 aa14.62□□□□□ -0.07
SHC1-210ENST00000448116 KIFC2Q96AC6 838 aa14.62□□□□□ -0.07
SHC1-210ENST00000448116 CDC5LQ99459 802 aaKnown RBP14.62□□□□□ -0.07
SHC1-210ENST00000448116 NUP88Q99567 741 aaPredicted RBP14.62□□□□□ -0.07
SHC1-210ENST00000448116 TAB2Q9NYJ8 693 aa14.62□□□□□ -0.07
SHC1-210ENST00000448116 TFRCP02786 760 aaKnown RBP14.62□□□□□ -0.07
SHC1-210ENST00000448116 VEGFAP15692 232 aaPredicted RBP14.62□□□□□ -0.07
SHC1-210ENST00000448116 ANKRD18AQ8IVF6 992 aa14.62□□□□□ -0.07
SHC1-210ENST00000448116 FERMT2Q96AC1 680 aa14.62□□□□□ -0.07
SHC1-210ENST00000448116 ADD3Q9UEY8 706 aaKnown RBP14.62□□□□□ -0.07
SHC1-210ENST00000448116 PPP1R3GB7ZBB8 358 aa14.61□□□□□ -0.07
SHC1-210ENST00000448116 SASH3O75995 380 aa14.61□□□□□ -0.07
SHC1-210ENST00000448116 FXR1P51114 621 aaKnown RBP eCLIP14.61□□□□□ -0.07
SHC1-210ENST00000448116 DPYDQ12882 1025 aa14.61□□□□□ -0.07
SHC1-210ENST00000448116 CUL4BQ13620 913 aa14.61□□□□□ -0.07
SHC1-210ENST00000448116 SPATA20Q8TB22 786 aa14.61□□□□□ -0.07
SHC1-210ENST00000448116 PLIN2Q99541 437 aa14.61□□□□□ -0.07
SHC1-210ENST00000448116 CCDC66A2RUB6 948 aa14.61□□□□□ -0.07
SHC1-210ENST00000448116 AK7Q96M32 723 aa14.61□□□□□ -0.07
SHC1-210ENST00000448116 GSDMAQ96QA5 445 aa14.61□□□□□ -0.07
SHC1-210ENST00000448116 PANX2Q96RD6 677 aa14.61□□□□□ -0.07
SHC1-210ENST00000448116 PARP10Q53GL7 1025 aa14.61□□□□□ -0.07
SHC1-210ENST00000448116 SMIM5Q71RC9 77 aa14.61□□□□□ -0.07
SHC1-210ENST00000448116 SRBD1Q8N5C6 995 aaKnown RBP14.61□□□□□ -0.07
SHC1-210ENST00000448116 IQUBQ8NA54 791 aa14.61□□□□□ -0.07
SHC1-210ENST00000448116 TRERF1Q96PN7 1200 aa14.61□□□□□ -0.07
SHC1-210ENST00000448116 CTAGE1Q96RT6 745 aa14.61□□□□□ -0.07
SHC1-210ENST00000448116 CAMTA2O94983 1202 aa14.6□□□□□ -0.07
SHC1-210ENST00000448116 OAS2P29728 719 aaKnown RBP14.6□□□□□ -0.07
SHC1-210ENST00000448116 CHMP4BP1P59074 171 aa14.6□□□□□ -0.07
SHC1-210ENST00000448116 TROAPQ12815 778 aa14.6□□□□□ -0.07
SHC1-210ENST00000448116 APTXQ7Z2E3 356 aaKnown RBP14.6□□□□□ -0.07
SHC1-210ENST00000448116 CCDC24Q8N4L8 307 aa14.6□□□□□ -0.07
SHC1-210ENST00000448116 RIOK1Q9BRS2 568 aaKnown RBP14.6□□□□□ -0.07
SHC1-210ENST00000448116 MFAP3LO75121 409 aa14.6□□□□□ -0.07
SHC1-210ENST00000448116 TBC1D8O95759 1140 aa14.6□□□□□ -0.07
SHC1-210ENST00000448116 CYP2D6P10635 497 aa14.6□□□□□ -0.07
SHC1-210ENST00000448116 GYS2P54840 703 aa14.6□□□□□ -0.07
SHC1-210ENST00000448116 KCNQ4P56696 695 aa14.6□□□□□ -0.07
SHC1-210ENST00000448116 FUT2Q10981 343 aa14.6□□□□□ -0.07
SHC1-210ENST00000448116 PPP2R5BQ15173 497 aa14.6□□□□□ -0.07
SHC1-210ENST00000448116 CTR9Q6PD62 1173 aa14.6□□□□□ -0.07
SHC1-210ENST00000448116 RBM28Q9NW13 759 aaKnown RBP14.6□□□□□ -0.07
SHC1-210ENST00000448116 TFCP2L1Q9NZI6 479 aa14.6□□□□□ -0.07
SHC1-210ENST00000448116 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.6□□□□□ -0.07
SHC1-210ENST00000448116 TOGARAM1Q9Y4F4 1720 aa14.6□□□□□ -0.07
SHC1-210ENST00000448116 ADAMTS3O15072 1205 aa14.6□□□□□ -0.07
SHC1-210ENST00000448116 NTSR2O95665 410 aa14.6□□□□□ -0.07
SHC1-210ENST00000448116 ABL1P00519 1130 aa14.6□□□□□ -0.07
SHC1-210ENST00000448116 SMC1AQ14683 1233 aaKnown RBP14.6□□□□□ -0.07
SHC1-210ENST00000448116 KRT31Q15323 416 aa14.6□□□□□ -0.07
SHC1-210ENST00000448116 C3orf67Q6ZVT6 689 aa14.6□□□□□ -0.07
SHC1-210ENST00000448116 RASGRP4Q8TDF6 673 aa14.6□□□□□ -0.07
SHC1-210ENST00000448116 MTA3Q9BTC8 594 aa14.6□□□□□ -0.07
SHC1-210ENST00000448116 PAPPAQ13219 1627 aa14.59□□□□□ -0.07
SHC1-210ENST00000448116 LOC102724428A0A0B4J2F2 783 aa14.59□□□□□ -0.07
SHC1-210ENST00000448116 TSPY2A6NKD2 308 aa14.59□□□□□ -0.07
SHC1-210ENST00000448116 BMP15O95972 392 aa14.59□□□□□ -0.07
SHC1-210ENST00000448116 SIK1P57059 783 aa14.59□□□□□ -0.07
SHC1-210ENST00000448116 MCM6Q14566 821 aa14.59□□□□□ -0.07
SHC1-210ENST00000448116 ERFEQ4G0M1 354 aa14.59□□□□□ -0.07
SHC1-210ENST00000448116 TMTC3Q6ZXV5 915 aa14.59□□□□□ -0.07
SHC1-210ENST00000448116 ANKRD20A12PQ8NF67 263 aa14.59□□□□□ -0.07
SHC1-210ENST00000448116 RABGGTAQ92696 567 aa14.59□□□□□ -0.07
SHC1-210ENST00000448116 SLF1Q9BQI6 1058 aa14.59□□□□□ -0.07
SHC1-210ENST00000448116 XDHP47989 1333 aa14.59□□□□□ -0.07
SHC1-210ENST00000448116 GYPCP04921 128 aa14.59□□□□□ -0.07
SHC1-210ENST00000448116 RHOXF2BP0C7M4 288 aa14.59□□□□□ -0.07
SHC1-210ENST00000448116 RCAN1P53805 252 aa14.59□□□□□ -0.07
SHC1-210ENST00000448116 SH3RF1Q7Z6J0 888 aa14.59□□□□□ -0.07
SHC1-210ENST00000448116 CNGA4Q8IV77 575 aa14.59□□□□□ -0.07
SHC1-210ENST00000448116 SLC35F6Q8N357 371 aa14.59□□□□□ -0.07
SHC1-210ENST00000448116 NEK11Q8NG66 645 aa14.59□□□□□ -0.07
SHC1-210ENST00000448116 EEF2KMTQ96G04 330 aa14.59□□□□□ -0.07
SHC1-210ENST00000448116 RHOXF2Q9BQY4 288 aa14.59□□□□□ -0.07
SHC1-210ENST00000448116 GDAQ9Y2T3 454 aa14.59□□□□□ -0.07
SHC1-210ENST00000448116 ITPK1Q13572 414 aa14.58□□□□□ -0.07
SHC1-210ENST00000448116 CDKAL1Q5VV42 579 aa14.58□□□□□ -0.07
SHC1-210ENST00000448116 RSRC2Q7L4I2 434 aaKnown RBP14.58□□□□□ -0.07
SHC1-210ENST00000448116 NELFBQ8WX92 580 aa14.58□□□□□ -0.07
SHC1-210ENST00000448116 GPKOWQ92917 476 aaPredicted RBP eCLIP14.58□□□□□ -0.07
SHC1-210ENST00000448116 NID2Q14112 1375 aa14.58□□□□□ -0.08
SHC1-210ENST00000448116 ADAMTS2O95450 1211 aa14.58□□□□□ -0.08
SHC1-210ENST00000448116 CALM1P0DP23 149 aa14.58□□□□□ -0.08
SHC1-210ENST00000448116 CALM2P0DP24 149 aa14.58□□□□□ -0.08
SHC1-210ENST00000448116 CALM3P0DP25 149 aa14.58□□□□□ -0.08
SHC1-210ENST00000448116 TXLNAP40222 546 aa14.58□□□□□ -0.08
SHC1-210ENST00000448116 ANAPC4Q9UJX5 808 aa14.58□□□□□ -0.08
SHC1-210ENST00000448116 RNF225M0QZC1 329 aaPredicted RBP14.58□□□□□ -0.08
SHC1-210ENST00000448116 KRT9P35527 623 aa14.58□□□□□ -0.08
SHC1-210ENST00000448116 CTAGE9A4FU28 777 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms