RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 MAP3K9P80192 1104 aa22.79■■□□□ 1.24
SGCE-207ENST00000447873 PPP2R5BQ15173 497 aa22.79■■□□□ 1.24
SGCE-207ENST00000447873 CTCFLQ8NI51 663 aaPredicted RBP22.79■■□□□ 1.24
SGCE-207ENST00000447873 NID2Q14112 1375 aa22.78■■□□□ 1.24
SGCE-207ENST00000447873 CCDC196A0A1B0GTZ2 297 aa22.78■■□□□ 1.24
SGCE-207ENST00000447873 CPLX1O14810 134 aa22.78■■□□□ 1.24
SGCE-207ENST00000447873 OTOFQ9HC10 1997 aa22.78■■□□□ 1.24
SGCE-207ENST00000447873 USP17L5A8MUK1 530 aa22.77■■□□□ 1.24
SGCE-207ENST00000447873 KIF5BP33176 963 aa22.77■■□□□ 1.24
SGCE-207ENST00000447873 ADD1P35611 737 aaKnown RBP22.77■■□□□ 1.24
SGCE-207ENST00000447873 NOL9Q5SY16 702 aaKnown RBP22.77■■□□□ 1.24
SGCE-207ENST00000447873 ARMC9Q7Z3E5 817 aa22.77■■□□□ 1.24
SGCE-207ENST00000447873 MAP3K14Q99558 947 aa22.77■■□□□ 1.24
SGCE-207ENST00000447873 CSADQ9Y600 493 aa22.77■■□□□ 1.24
SGCE-207ENST00000447873 CDC27P30260 824 aa22.76■■□□□ 1.23
SGCE-207ENST00000447873 FMR1Q06787 632 aaKnown RBP eCLIP22.76■■□□□ 1.23
SGCE-207ENST00000447873 CPLX2Q6PUV4 134 aaKnown RBP22.76■■□□□ 1.23
SGCE-207ENST00000447873 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.76■■□□□ 1.23
SGCE-207ENST00000447873 CCDC84Q86UT8 332 aaPredicted RBP22.76■■□□□ 1.23
SGCE-207ENST00000447873 ACER1Q8TDN7 264 aa22.76■■□□□ 1.23
SGCE-207ENST00000447873 LLPHQ9BRT6 129 aaKnown RBP22.76■■□□□ 1.23
SGCE-207ENST00000447873 SH2D4AQ9H788 454 aa22.76■■□□□ 1.23
SGCE-207ENST00000447873 RBM28Q9NW13 759 aaKnown RBP22.76■■□□□ 1.23
SGCE-207ENST00000447873 SYNPO2Q9UMS6 1093 aa22.76■■□□□ 1.23
SGCE-207ENST00000447873 PAPPA2Q9BXP8 1791 aa22.76■■□□□ 1.23
SGCE-207ENST00000447873 A0A1W2PRG0 241 aa22.76■■□□□ 1.23
SGCE-207ENST00000447873 RAD21O60216 631 aa22.76■■□□□ 1.23
SGCE-207ENST00000447873 PTPRAP18433 802 aa22.76■■□□□ 1.23
SGCE-207ENST00000447873 ECE1P42892 770 aa22.76■■□□□ 1.23
SGCE-207ENST00000447873 VGLL4Q14135 290 aa22.76■■□□□ 1.23
SGCE-207ENST00000447873 GRM4Q14833 912 aa22.76■■□□□ 1.23
SGCE-207ENST00000447873 MAP3K11Q16584 847 aa22.76■■□□□ 1.23
SGCE-207ENST00000447873 MOB2Q70IA6 237 aa22.76■■□□□ 1.23
SGCE-207ENST00000447873 ANKRD13AQ8IZ07 590 aa22.76■■□□□ 1.23
SGCE-207ENST00000447873 FAM217BQ9NTX9 383 aaPredicted RBP22.76■■□□□ 1.23
SGCE-207ENST00000447873 TMX2Q9Y320 296 aa22.76■■□□□ 1.23
SGCE-207ENST00000447873 FEZ1Q99689 392 aa22.75■■□□□ 1.23
SGCE-207ENST00000447873 AS3MTQ9HBK9 375 aa22.75■■□□□ 1.23
SGCE-207ENST00000447873 SMC3Q9UQE7 1217 aa22.75■■□□□ 1.23
SGCE-207ENST00000447873 F5H6K3 240 aa22.74■■□□□ 1.23
SGCE-207ENST00000447873 KIF3CO14782 793 aa22.74■■□□□ 1.23
SGCE-207ENST00000447873 CDKL5O76039 1030 aa22.74■■□□□ 1.23
SGCE-207ENST00000447873 ITGBL1O95965 494 aaPredicted RBP22.74■■□□□ 1.23
SGCE-207ENST00000447873 PARP1P09874 1014 aaKnown RBP22.74■■□□□ 1.23
SGCE-207ENST00000447873 PDHBP11177 359 aa22.74■■□□□ 1.23
SGCE-207ENST00000447873 KLRC3Q07444 240 aa22.74■■□□□ 1.23
SGCE-207ENST00000447873 GMCL1P1Q8NEA9 526 aa22.74■■□□□ 1.23
SGCE-207ENST00000447873 GOPCQ9HD26 462 aa22.74■■□□□ 1.23
SGCE-207ENST00000447873 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.74■■□□□ 1.23
SGCE-207ENST00000447873 CELF2O95319 508 aaKnown RBP22.73■■□□□ 1.23
SGCE-207ENST00000447873 SLFN13Q68D06 897 aa22.73■■□□□ 1.23
SGCE-207ENST00000447873 USP17L2Q6R6M4 530 aa22.73■■□□□ 1.23
SGCE-207ENST00000447873 NSUN7Q8NE18 718 aaKnown RBP22.73■■□□□ 1.23
SGCE-207ENST00000447873 MAD2L2Q9UI95 211 aa22.73■■□□□ 1.23
SGCE-207ENST00000447873 SNCAIPQ9Y6H5 919 aa22.73■■□□□ 1.23
SGCE-207ENST00000447873 ZHX2Q9Y6X8 837 aa22.73■■□□□ 1.23
SGCE-207ENST00000447873 PHIPQ8WWQ0 1821 aa22.72■■□□□ 1.23
SGCE-207ENST00000447873 TRPM7Q96QT4 1865 aa22.72■■□□□ 1.23
SGCE-207ENST00000447873 DTNBO60941 627 aa22.72■■□□□ 1.23
SGCE-207ENST00000447873 CTDNEP1O95476 244 aa22.72■■□□□ 1.23
SGCE-207ENST00000447873 SNHG28P0DPA3 235 aa22.72■■□□□ 1.23
SGCE-207ENST00000447873 GNAQP50148 359 aa22.72■■□□□ 1.23
SGCE-207ENST00000447873 FKBP1BP68106 108 aa22.72■■□□□ 1.23
SGCE-207ENST00000447873 RASGRP2Q7LDG7 609 aa22.72■■□□□ 1.23
SGCE-207ENST00000447873 WDR18Q9BV38 432 aa22.72■■□□□ 1.23
SGCE-207ENST00000447873 PALM3A6NDB9 673 aaPredicted RBP22.72■■□□□ 1.23
SGCE-207ENST00000447873 UBE2Q2LH0YL09 131 aa22.72■■□□□ 1.23
SGCE-207ENST00000447873 JAK2O60674 1132 aa22.72■■□□□ 1.23
SGCE-207ENST00000447873 NDUFB10O96000 172 aa22.72■■□□□ 1.23
SGCE-207ENST00000447873 YY1P25490 414 aa22.72■■□□□ 1.23
SGCE-207ENST00000447873 SLC1A4P43007 532 aa22.72■■□□□ 1.23
SGCE-207ENST00000447873 NTRK3Q16288 839 aa22.72■■□□□ 1.23
SGCE-207ENST00000447873 ASPRV1Q53RT3 343 aa22.72■■□□□ 1.23
SGCE-207ENST00000447873 TMTC3Q6ZXV5 915 aa22.72■■□□□ 1.23
SGCE-207ENST00000447873 CMTR1Q8N1G2 835 aaKnown RBP22.72■■□□□ 1.23
SGCE-207ENST00000447873 CCDC82Q8N4S0 544 aa22.72■■□□□ 1.23
SGCE-207ENST00000447873 C2orf69Q8N8R5 385 aa22.72■■□□□ 1.23
SGCE-207ENST00000447873 ZNF280CQ8ND82 737 aa22.72■■□□□ 1.23
SGCE-207ENST00000447873 DCAF4Q8WV16 495 aa22.72■■□□□ 1.23
SGCE-207ENST00000447873 ELP3Q9H9T3 547 aa22.72■■□□□ 1.23
SGCE-207ENST00000447873 GBA2Q9HCG7 927 aaPredicted RBP22.72■■□□□ 1.23
SGCE-207ENST00000447873 CWC22Q9HCG8 908 aaKnown RBP22.72■■□□□ 1.23
SGCE-207ENST00000447873 PTPDC1A2A3K4 754 aa22.71■■□□□ 1.23
SGCE-207ENST00000447873 USP17L10C9JJH3 530 aa22.71■■□□□ 1.23
SGCE-207ENST00000447873 PPFIA3O75145 1194 aa22.71■■□□□ 1.23
SGCE-207ENST00000447873 GOLGA8HP0CJ92 632 aa22.71■■□□□ 1.23
SGCE-207ENST00000447873 IFNAR1P17181 557 aa22.71■■□□□ 1.23
SGCE-207ENST00000447873 GJB2P29033 226 aa22.71■■□□□ 1.23
SGCE-207ENST00000447873 SPP2Q13103 211 aa22.71■■□□□ 1.23
SGCE-207ENST00000447873 ZYXQ15942 572 aaKnown RBP22.71■■□□□ 1.23
SGCE-207ENST00000447873 CCDC96Q2M329 555 aa22.71■■□□□ 1.23
SGCE-207ENST00000447873 FRMPD2Q68DX3 1309 aaPredicted RBP22.71■■□□□ 1.23
SGCE-207ENST00000447873 STAG2Q8N3U4 1231 aa22.71■■□□□ 1.23
SGCE-207ENST00000447873 SMARCC2Q8TAQ2 1214 aa22.71■■□□□ 1.23
SGCE-207ENST00000447873 VCPKMTQ9H867 229 aa22.71■■□□□ 1.23
SGCE-207ENST00000447873 ISY1Q9ULR0 285 aaKnown RBP22.71■■□□□ 1.23
SGCE-207ENST00000447873 UNCXA6NJT0 531 aa22.7■■□□□ 1.22
SGCE-207ENST00000447873 PLEKHA8P1O95397 391 aa22.7■■□□□ 1.22
SGCE-207ENST00000447873 HMGN5P82970 282 aaKnown RBP22.7■■□□□ 1.22
SGCE-207ENST00000447873 ZNF543Q08ER8 600 aa22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms