RNA–Protein interactions for RNA: ENST00000447784.1

LINC00408-201, long intergenic non-protein coding RNA 408, humanhuman

TSL 5 BASIC

Gene LINC00408, Length 560 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00408-201ENST00000447784 TRIM17Q9Y577 477 aa13.64□□□□□ -0.23
LINC00408-201ENST00000447784 SNX14Q9Y5W7 946 aa13.64□□□□□ -0.23
LINC00408-201ENST00000447784 CASP8AP2Q9UKL3 1982 aa13.63□□□□□ -0.23
LINC00408-201ENST00000447784 CCDC85CA6NKD9 419 aa13.63□□□□□ -0.23
LINC00408-201ENST00000447784 ANAPC15P60006 121 aa13.63□□□□□ -0.23
LINC00408-201ENST00000447784 FGD1P98174 961 aa13.63□□□□□ -0.23
LINC00408-201ENST00000447784 ICA1Q05084 483 aa13.63□□□□□ -0.23
LINC00408-201ENST00000447784 GADL1Q6ZQY3 521 aa13.63□□□□□ -0.23
LINC00408-201ENST00000447784 STOX1Q6ZVD7 989 aa13.63□□□□□ -0.23
LINC00408-201ENST00000447784 CCDC84Q86UT8 332 aaPredicted RBP13.63□□□□□ -0.23
LINC00408-201ENST00000447784 EFCC1Q9HA90 598 aa13.63□□□□□ -0.23
LINC00408-201ENST00000447784 ZSWIM5Q9P217 1185 aa13.63□□□□□ -0.23
LINC00408-201ENST00000447784 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.63□□□□□ -0.23
LINC00408-201ENST00000447784 STX8Q9UNK0 236 aa13.63□□□□□ -0.23
LINC00408-201ENST00000447784 AGTPBP1Q9UPW5 1226 aa13.63□□□□□ -0.23
LINC00408-201ENST00000447784 HPS5Q9UPZ3 1129 aa13.63□□□□□ -0.23
LINC00408-201ENST00000447784 ADGRA2Q96PE1 1338 aa13.63□□□□□ -0.23
LINC00408-201ENST00000447784 TTLL1O95922 423 aa13.62□□□□□ -0.23
LINC00408-201ENST00000447784 JAG1P78504 1218 aa13.62□□□□□ -0.23
LINC00408-201ENST00000447784 BLOC1S2Q6QNY1 142 aa13.62□□□□□ -0.23
LINC00408-201ENST00000447784 ZSCAN10Q96SZ4 725 aaPredicted RBP13.62□□□□□ -0.23
LINC00408-201ENST00000447784 TCP11L1Q9NUJ3 509 aa13.62□□□□□ -0.23
LINC00408-201ENST00000447784 MTMR4Q9NYA4 1195 aa13.62□□□□□ -0.23
LINC00408-201ENST00000447784 CLIP2Q9UDT6 1046 aa13.62□□□□□ -0.23
LINC00408-201ENST00000447784 TACC3Q9Y6A5 838 aa13.62□□□□□ -0.23
LINC00408-201ENST00000447784 TAF6LQ9Y6J9 622 aa13.62□□□□□ -0.23
LINC00408-201ENST00000447784 C19orf81C9J6K1 198 aa13.61□□□□□ -0.23
LINC00408-201ENST00000447784 USP17L10C9JJH3 530 aa13.61□□□□□ -0.23
LINC00408-201ENST00000447784 IFIT3O14879 490 aaKnown RBP13.61□□□□□ -0.23
LINC00408-201ENST00000447784 PRC1O43663 620 aa13.61□□□□□ -0.23
LINC00408-201ENST00000447784 RAD21O60216 631 aa13.61□□□□□ -0.23
LINC00408-201ENST00000447784 GNRH1P01148 92 aa13.61□□□□□ -0.23
LINC00408-201ENST00000447784 EEF2P13639 858 aaKnown RBP13.61□□□□□ -0.23
LINC00408-201ENST00000447784 CASTP20810 708 aaKnown RBP13.61□□□□□ -0.23
LINC00408-201ENST00000447784 BACE1P56817 501 aa13.61□□□□□ -0.23
LINC00408-201ENST00000447784 LACTBP83111 547 aaPredicted RBP13.61□□□□□ -0.23
LINC00408-201ENST00000447784 PABPC4Q13310 644 aaKnown RBP eCLIP13.61□□□□□ -0.23
LINC00408-201ENST00000447784 KIF22Q14807 665 aa13.61□□□□□ -0.23
LINC00408-201ENST00000447784 SHROOM1Q2M3G4 852 aaPredicted RBP13.61□□□□□ -0.23
LINC00408-201ENST00000447784 DHX32Q7L7V1 743 aaKnown RBP13.61□□□□□ -0.23
LINC00408-201ENST00000447784 CEP95Q96GE4 821 aa13.61□□□□□ -0.23
LINC00408-201ENST00000447784 TTC14Q96N46 770 aa13.61□□□□□ -0.23
LINC00408-201ENST00000447784 ZKSCAN3Q9BRR0 538 aa13.61□□□□□ -0.23
LINC00408-201ENST00000447784 TMOD4Q9NZQ9 345 aa13.61□□□□□ -0.23
LINC00408-201ENST00000447784 NYAP2Q9P242 653 aa13.61□□□□□ -0.23
LINC00408-201ENST00000447784 PTPN22Q9Y2R2 807 aa13.61□□□□□ -0.23
LINC00408-201ENST00000447784 CYP46A1Q9Y6A2 500 aa13.61□□□□□ -0.23
LINC00408-201ENST00000447784 MYO5AQ9Y4I1 1855 aaKnown RBP13.61□□□□□ -0.23
LINC00408-201ENST00000447784 AK9Q5TCS8 1911 aa13.6□□□□□ -0.23
LINC00408-201ENST00000447784 CYP2C8P10632 490 aa13.6□□□□□ -0.23
LINC00408-201ENST00000447784 BCRP11274 1271 aa13.6□□□□□ -0.23
LINC00408-201ENST00000447784 GUCY1A2P33402 732 aa13.6□□□□□ -0.23
LINC00408-201ENST00000447784 USP14P54578 494 aa13.6□□□□□ -0.23
LINC00408-201ENST00000447784 ADCK5Q3MIX3 580 aa13.6□□□□□ -0.23
LINC00408-201ENST00000447784 TMEM67Q5HYA8 995 aa13.6□□□□□ -0.23
LINC00408-201ENST00000447784 CYB5R4Q7L1T6 521 aa13.6□□□□□ -0.23
LINC00408-201ENST00000447784 CHST3Q7LGC8 479 aa13.6□□□□□ -0.23
LINC00408-201ENST00000447784 DGKHQ86XP1 1220 aa13.6□□□□□ -0.23
LINC00408-201ENST00000447784 MB21D2Q8IYB1 491 aaPredicted RBP13.6□□□□□ -0.23
LINC00408-201ENST00000447784 TMEM87BQ96K49 555 aa13.6□□□□□ -0.23
LINC00408-201ENST00000447784 MTA3Q9BTC8 594 aa13.6□□□□□ -0.23
LINC00408-201ENST00000447784 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.6□□□□□ -0.23
LINC00408-201ENST00000447784 TM6SF1Q9BZW5 370 aa13.6□□□□□ -0.23
LINC00408-201ENST00000447784 GOPCQ9HD26 462 aa13.6□□□□□ -0.23
LINC00408-201ENST00000447784 IL17RBQ9NRM6 502 aa13.6□□□□□ -0.23
LINC00408-201ENST00000447784 CPA4Q9UI42 421 aa13.6□□□□□ -0.23
LINC00408-201ENST00000447784 PNMA3Q9UL41 463 aa13.6□□□□□ -0.23
LINC00408-201ENST00000447784 DOCK1Q14185 1865 aa13.59□□□□□ -0.23
LINC00408-201ENST00000447784 IGKV6D-41A0A0C4DH26 115 aa13.59□□□□□ -0.23
LINC00408-201ENST00000447784 NMT2O60551 498 aa13.59□□□□□ -0.23
LINC00408-201ENST00000447784 TOP1P11387 765 aaKnown RBP13.59□□□□□ -0.23
LINC00408-201ENST00000447784 RBM25P49756 843 aaKnown RBP13.59□□□□□ -0.23
LINC00408-201ENST00000447784 RGS19P49795 217 aa13.59□□□□□ -0.23
LINC00408-201ENST00000447784 HMGCS2P54868 508 aa13.59□□□□□ -0.23
LINC00408-201ENST00000447784 PRMT2P55345 433 aa13.59□□□□□ -0.23
LINC00408-201ENST00000447784 CAP1Q01518 475 aa13.59□□□□□ -0.23
LINC00408-201ENST00000447784 MTMR2Q13614 643 aa13.59□□□□□ -0.23
LINC00408-201ENST00000447784 WTAPQ15007 396 aa13.59□□□□□ -0.23
LINC00408-201ENST00000447784 ZYXQ15942 572 aaKnown RBP13.59□□□□□ -0.23
LINC00408-201ENST00000447784 TREML2Q5T2D2 321 aa13.59□□□□□ -0.23
LINC00408-201ENST00000447784 IFIT1BQ5T764 474 aaKnown RBP13.59□□□□□ -0.23
LINC00408-201ENST00000447784 USP17L2Q6R6M4 530 aa13.59□□□□□ -0.23
LINC00408-201ENST00000447784 NFXL1Q6ZNB6 911 aa13.59□□□□□ -0.23
LINC00408-201ENST00000447784 CLEC10AQ8IUN9 316 aa13.59□□□□□ -0.23
LINC00408-201ENST00000447784 TMTC2Q8N394 836 aa13.59□□□□□ -0.23
LINC00408-201ENST00000447784 KIAA1683Q9H0B3 1180 aa13.59□□□□□ -0.23
LINC00408-201ENST00000447784 KAT14Q9H8E8 782 aa13.59□□□□□ -0.23
LINC00408-201ENST00000447784 SYNPO2Q9UMS6 1093 aa13.59□□□□□ -0.23
LINC00408-201ENST00000447784 TMX2Q9Y320 296 aa13.59□□□□□ -0.23
LINC00408-201ENST00000447784 TNKSO95271 1327 aa13.59□□□□□ -0.23
LINC00408-201ENST00000447784 PLIN4Q96Q06 1357 aa13.58□□□□□ -0.23
LINC00408-201ENST00000447784 SIPA1L1O43166 1804 aa13.58□□□□□ -0.24
LINC00408-201ENST00000447784 FOCADQ5VW36 1801 aa13.58□□□□□ -0.24
LINC00408-201ENST00000447784 ABCB7O75027 752 aa13.58□□□□□ -0.24
LINC00408-201ENST00000447784 OSBPP22059 807 aa13.58□□□□□ -0.24
LINC00408-201ENST00000447784 RPS6KB1P23443 525 aa13.58□□□□□ -0.24
LINC00408-201ENST00000447784 HOXA7P31268 230 aaPredicted RBP13.58□□□□□ -0.24
LINC00408-201ENST00000447784 SYNE3Q6ZMZ3 975 aa13.58□□□□□ -0.24
LINC00408-201ENST00000447784 RUFY3Q7L099 469 aa13.58□□□□□ -0.24
LINC00408-201ENST00000447784 ACER1Q8TDN7 264 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms