RNA–Protein interactions for RNA: ENST00000447734.5

PMS1-216, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-216ENST00000447734 CAMKK2Q96RR4 588 aa4.92□□□□□ -1.62
PMS1-216ENST00000447734 SLC9A7Q96T83 725 aa4.92□□□□□ -1.62
PMS1-216ENST00000447734 POP1Q99575 1024 aaKnown RBP4.92□□□□□ -1.62
PMS1-216ENST00000447734 RTFDC1Q9BY42 306 aaPredicted RBP4.92□□□□□ -1.62
PMS1-216ENST00000447734 CCDC8Q9H0W5 538 aaPredicted RBP4.92□□□□□ -1.62
PMS1-216ENST00000447734 LRP2BPQ9P2M1 347 aa4.92□□□□□ -1.62
PMS1-216ENST00000447734 GGA1Q9UJY5 639 aa4.92□□□□□ -1.62
PMS1-216ENST00000447734 CORINQ9Y5Q5 1042 aa4.92□□□□□ -1.62
PMS1-216ENST00000447734 SLC22A31A6NKX4 558 aa4.91□□□□□ -1.62
PMS1-216ENST00000447734 DNAJC8O75937 253 aaPredicted RBP4.91□□□□□ -1.62
PMS1-216ENST00000447734 NPTXRO95502 500 aa4.91□□□□□ -1.62
PMS1-216ENST00000447734 PLCG1P19174 1290 aa4.91□□□□□ -1.62
PMS1-216ENST00000447734 ZNF143P52747 638 aaPredicted RBP4.91□□□□□ -1.62
PMS1-216ENST00000447734 SUMO1P63165 101 aaKnown RBP4.91□□□□□ -1.62
PMS1-216ENST00000447734 GPLD1P80108 840 aa4.91□□□□□ -1.62
PMS1-216ENST00000447734 TMPRSS15P98073 1019 aa4.91□□□□□ -1.62
PMS1-216ENST00000447734 AP3B2Q13367 1082 aa4.91□□□□□ -1.62
PMS1-216ENST00000447734 DOC2BQ14184 412 aa4.91□□□□□ -1.62
PMS1-216ENST00000447734 LBRQ14739 615 aaKnown RBP4.91□□□□□ -1.62
PMS1-216ENST00000447734 DHCR24Q15392 516 aa4.91□□□□□ -1.62
PMS1-216ENST00000447734 C10orf62Q5T681 223 aaPredicted RBP4.91□□□□□ -1.62
PMS1-216ENST00000447734 CEP135Q66GS9 1140 aa4.91□□□□□ -1.62
PMS1-216ENST00000447734 MPRIPQ6WCQ1 1025 aa4.91□□□□□ -1.62
PMS1-216ENST00000447734 SLCO4C1Q6ZQN7 724 aa4.91□□□□□ -1.62
PMS1-216ENST00000447734 HFE2Q6ZVN8 426 aa4.91□□□□□ -1.62
PMS1-216ENST00000447734 RAB44Q7Z6P3 723 aaPredicted RBP4.91□□□□□ -1.62
PMS1-216ENST00000447734 PDZD3Q86UT5 571 aa4.91□□□□□ -1.62
PMS1-216ENST00000447734 DGKHQ86XP1 1220 aa4.91□□□□□ -1.62
PMS1-216ENST00000447734 MAGEB6Q8N7X4 407 aa4.91□□□□□ -1.62
PMS1-216ENST00000447734 GOLGA6L1Q8N7Z2 621 aa4.91□□□□□ -1.62
PMS1-216ENST00000447734 NAP1L4Q99733 375 aaKnown RBP4.91□□□□□ -1.62
PMS1-216ENST00000447734 PUS7LQ9H0K6 701 aaKnown RBP4.91□□□□□ -1.62
PMS1-216ENST00000447734 SEMA6BQ9H3T3 888 aa4.91□□□□□ -1.62
PMS1-216ENST00000447734 CNNM2Q9H8M5 875 aa4.91□□□□□ -1.62
PMS1-216ENST00000447734 AVENQ9NQS1 362 aaPredicted RBP4.91□□□□□ -1.62
PMS1-216ENST00000447734 STRN4Q9NRL3 753 aa4.91□□□□□ -1.62
PMS1-216ENST00000447734 MARK1Q9P0L2 795 aa4.91□□□□□ -1.62
PMS1-216ENST00000447734 TRHDEQ9UKU6 1024 aa4.91□□□□□ -1.62
PMS1-216ENST00000447734 ZNF214Q9UL59 606 aaPredicted RBP4.91□□□□□ -1.62
PMS1-216ENST00000447734 PCDHA4Q9UN74 947 aa4.91□□□□□ -1.62
PMS1-216ENST00000447734 PCDHGC4Q9Y5F7 938 aa4.91□□□□□ -1.62
PMS1-216ENST00000447734 FAM177BA6PVY3 158 aa4.9□□□□□ -1.63
PMS1-216ENST00000447734 GFRA2O00451 464 aa4.9□□□□□ -1.63
PMS1-216ENST00000447734 GNB5O14775 395 aa4.9□□□□□ -1.63
PMS1-216ENST00000447734 NRDCO43847 1150 aa4.9□□□□□ -1.63
PMS1-216ENST00000447734 BNIP3LO60238 219 aa4.9□□□□□ -1.63
PMS1-216ENST00000447734 GSTP1P09211 210 aaKnown RBP4.9□□□□□ -1.63
PMS1-216ENST00000447734 IFIT2P09913 472 aaKnown RBP4.9□□□□□ -1.63
PMS1-216ENST00000447734 MAPTP10636 758 aaKnown RBP4.9□□□□□ -1.63
PMS1-216ENST00000447734 EPXP11678 715 aa4.9□□□□□ -1.63
PMS1-216ENST00000447734 PTPRAP18433 802 aa4.9□□□□□ -1.63
PMS1-216ENST00000447734 EIF2AK2P19525 551 aaKnown RBP4.9□□□□□ -1.63
PMS1-216ENST00000447734 POU3F2P20265 443 aaPredicted RBP4.9□□□□□ -1.63
PMS1-216ENST00000447734 PPP2R2AP63151 447 aa4.9□□□□□ -1.63
PMS1-216ENST00000447734 PDE4BQ07343 736 aa4.9□□□□□ -1.63
PMS1-216ENST00000447734 NEUROD1Q13562 356 aa4.9□□□□□ -1.63
PMS1-216ENST00000447734 PCBP1Q15365 356 aaKnown RBP eCLIP4.9□□□□□ -1.63
PMS1-216ENST00000447734 BBS9Q3SYG4 887 aa4.9□□□□□ -1.63
PMS1-216ENST00000447734 ZMYM1Q5SVZ6 1142 aa4.9□□□□□ -1.63
PMS1-216ENST00000447734 CDCP2Q5VXM1 449 aa4.9□□□□□ -1.63
PMS1-216ENST00000447734 VN1R5Q7Z5H4 357 aa4.9□□□□□ -1.63
PMS1-216ENST00000447734 KRTAP19-1Q8IUB9 90 aa4.9□□□□□ -1.63
PMS1-216ENST00000447734 TEX2Q8IWB9 1127 aa4.9□□□□□ -1.63
PMS1-216ENST00000447734 CNTD1Q8N815 330 aa4.9□□□□□ -1.63
PMS1-216ENST00000447734 PPM1EQ8WY54 764 aa4.9□□□□□ -1.63
PMS1-216ENST00000447734 USP7Q93009 1102 aa4.9□□□□□ -1.63
PMS1-216ENST00000447734 PPP1R14AQ96A00 147 aa4.9□□□□□ -1.63
PMS1-216ENST00000447734 PLPPR2Q96GM1 343 aa4.9□□□□□ -1.63
PMS1-216ENST00000447734 BTBD6Q96KE9 485 aa4.9□□□□□ -1.63
PMS1-216ENST00000447734 TTC1Q99614 292 aa4.9□□□□□ -1.63
PMS1-216ENST00000447734 SLC30A3Q99726 388 aa4.9□□□□□ -1.63
PMS1-216ENST00000447734 KLHL3Q9UH77 587 aa4.9□□□□□ -1.63
PMS1-216ENST00000447734 NDOR1Q9UHB4 597 aa4.9□□□□□ -1.63
PMS1-216ENST00000447734 INTUQ9ULD6 942 aa4.9□□□□□ -1.63
PMS1-216ENST00000447734 SOX13Q9UN79 622 aa4.9□□□□□ -1.63
PMS1-216ENST00000447734 SPEF1Q9Y4P9 236 aa4.9□□□□□ -1.63
PMS1-216ENST00000447734 SNCAIPQ9Y6H5 919 aa4.9□□□□□ -1.63
PMS1-216ENST00000447734 ANKRD34BA5PLL1 514 aa4.89□□□□□ -1.63
PMS1-216ENST00000447734 FAM83GA6ND36 823 aa4.89□□□□□ -1.63
PMS1-216ENST00000447734 PRPF3O43395 683 aaKnown RBP4.89□□□□□ -1.63
PMS1-216ENST00000447734 OPA1O60313 960 aa4.89□□□□□ -1.63
PMS1-216ENST00000447734 KPNA6O60684 536 aa4.89□□□□□ -1.63
PMS1-216ENST00000447734 RFPL1O75677 317 aa4.89□□□□□ -1.63
PMS1-216ENST00000447734 CT47B1P0C2W7 299 aaPredicted RBP4.89□□□□□ -1.63
PMS1-216ENST00000447734 ESRRAP11474 423 aaPredicted RBP4.89□□□□□ -1.63
PMS1-216ENST00000447734 RAG1P15918 1043 aa4.89□□□□□ -1.63
PMS1-216ENST00000447734 SELPP16109 830 aa4.89□□□□□ -1.63
PMS1-216ENST00000447734 ZSCAN20P17040 1043 aaPredicted RBP4.89□□□□□ -1.63
PMS1-216ENST00000447734 AMPD1P23109 780 aa4.89□□□□□ -1.63
PMS1-216ENST00000447734 FLT3P36888 993 aa4.89□□□□□ -1.63
PMS1-216ENST00000447734 PURAQ00577 322 aaKnown RBP4.89□□□□□ -1.63
PMS1-216ENST00000447734 TNP2Q05952 138 aa4.89□□□□□ -1.63
PMS1-216ENST00000447734 SETDB1Q15047 1291 aa4.89□□□□□ -1.63
PMS1-216ENST00000447734 TRIM61Q5EBN2 209 aa4.89□□□□□ -1.63
PMS1-216ENST00000447734 SYDE2Q5VT97 1194 aa4.89□□□□□ -1.63
PMS1-216ENST00000447734 HDXQ7Z353 690 aa4.89□□□□□ -1.63
PMS1-216ENST00000447734 BRAPQ7Z569 592 aa4.89□□□□□ -1.63
PMS1-216ENST00000447734 MICALL1Q8N3F8 863 aa4.89□□□□□ -1.63
PMS1-216ENST00000447734 GPBAR1Q8TDU6 330 aa4.89□□□□□ -1.63
PMS1-216ENST00000447734 FBXO41Q8TF61 875 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms