RNA–Protein interactions for RNA: ENST00000447439.6

KLHL3-202, Transcript of kelch like family member 3, humanhuman

TSL 1 (best)

Gene KLHL3, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL3-202ENST00000447439 STAG2Q8N3U4 1231 aa10.73□□□□□ -0.69
KLHL3-202ENST00000447439 ZNF579Q8NAF0 562 aaKnown RBP10.73□□□□□ -0.69
KLHL3-202ENST00000447439 EEF2KMTQ96G04 330 aa10.73□□□□□ -0.69
KLHL3-202ENST00000447439 MTRQ99707 1265 aa10.73□□□□□ -0.69
KLHL3-202ENST00000447439 ZNF652Q9Y2D9 606 aa10.73□□□□□ -0.69
KLHL3-202ENST00000447439 BCORQ6W2J9 1755 aa10.73□□□□□ -0.69
KLHL3-202ENST00000447439 XDHP47989 1333 aa10.73□□□□□ -0.69
KLHL3-202ENST00000447439 TSPY2A6NKD2 308 aa10.73□□□□□ -0.69
KLHL3-202ENST00000447439 ABL1P00519 1130 aa10.73□□□□□ -0.69
KLHL3-202ENST00000447439 XBP1P17861 261 aa10.73□□□□□ -0.69
KLHL3-202ENST00000447439 APTXQ7Z2E3 356 aaKnown RBP10.73□□□□□ -0.69
KLHL3-202ENST00000447439 SLC44A5Q8NCS7 719 aa10.73□□□□□ -0.69
KLHL3-202ENST00000447439 MNS1Q8NEH6 495 aa10.73□□□□□ -0.69
KLHL3-202ENST00000447439 TNFRSF25Q93038 417 aa10.73□□□□□ -0.69
KLHL3-202ENST00000447439 MCM9Q9NXL9 1143 aa10.73□□□□□ -0.69
KLHL3-202ENST00000447439 FAM205AQ6ZU69 1335 aa10.73□□□□□ -0.69
KLHL3-202ENST00000447439 ARHGAP6O43182 974 aa10.72□□□□□ -0.69
KLHL3-202ENST00000447439 SLFN14P0C7P3 912 aa10.72□□□□□ -0.69
KLHL3-202ENST00000447439 UBE4AQ14139 1066 aa10.72□□□□□ -0.69
KLHL3-202ENST00000447439 NR1I3Q14994 352 aa10.72□□□□□ -0.69
KLHL3-202ENST00000447439 DIXDC1Q155Q3 683 aa10.72□□□□□ -0.69
KLHL3-202ENST00000447439 RAD9BQ6WBX8 426 aa10.72□□□□□ -0.69
KLHL3-202ENST00000447439 CTCFLQ8NI51 663 aaPredicted RBP10.72□□□□□ -0.69
KLHL3-202ENST00000447439 BRIP1Q9BX63 1249 aa10.72□□□□□ -0.69
KLHL3-202ENST00000447439 MORC2Q9Y6X9 1032 aaPredicted RBP10.72□□□□□ -0.69
KLHL3-202ENST00000447439 MYH2Q9UKX2 1941 aa10.72□□□□□ -0.69
KLHL3-202ENST00000447439 COL14A1Q05707 1796 aaKnown RBP10.72□□□□□ -0.69
KLHL3-202ENST00000447439 DUOX1Q9NRD9 1551 aa10.72□□□□□ -0.69
KLHL3-202ENST00000447439 WNK3Q9BYP7 1800 aa10.72□□□□□ -0.69
KLHL3-202ENST00000447439 PHLPP1O60346 1717 aa10.72□□□□□ -0.69
KLHL3-202ENST00000447439 USP17L3A6NCW0 530 aa10.72□□□□□ -0.69
KLHL3-202ENST00000447439 USP17L4A6NCW7 530 aa10.72□□□□□ -0.69
KLHL3-202ENST00000447439 PPP1R3GB7ZBB8 358 aa10.72□□□□□ -0.69
KLHL3-202ENST00000447439 RNF225M0QZC1 329 aaPredicted RBP10.72□□□□□ -0.69
KLHL3-202ENST00000447439 GOLGA8HP0CJ92 632 aa10.72□□□□□ -0.69
KLHL3-202ENST00000447439 USP17L1Q7RTZ2 530 aa10.72□□□□□ -0.69
KLHL3-202ENST00000447439 IGSF22Q8N9C0 903 aa10.72□□□□□ -0.69
KLHL3-202ENST00000447439 SPATA20Q8TB22 786 aa10.72□□□□□ -0.69
KLHL3-202ENST00000447439 VPS16Q9H269 839 aa10.72□□□□□ -0.69
KLHL3-202ENST00000447439 SAP30BPQ9UHR5 308 aaKnown RBP10.72□□□□□ -0.69
KLHL3-202ENST00000447439 GDAQ9Y2T3 454 aa10.72□□□□□ -0.69
KLHL3-202ENST00000447439 CACNA1SQ13698 1873 aa10.72□□□□□ -0.69
KLHL3-202ENST00000447439 CASQ1P31415 396 aa10.71□□□□□ -0.69
KLHL3-202ENST00000447439 HIBADHP31937 336 aaKnown RBP10.71□□□□□ -0.69
KLHL3-202ENST00000447439 RPS8P62241 208 aaKnown RBP10.71□□□□□ -0.69
KLHL3-202ENST00000447439 PIP4K2BP78356 416 aa10.71□□□□□ -0.69
KLHL3-202ENST00000447439 SF3B3Q15393 1217 aaKnown RBP10.71□□□□□ -0.69
KLHL3-202ENST00000447439 RRAGBQ5VZM2 374 aa10.71□□□□□ -0.69
KLHL3-202ENST00000447439 TYW1BQ6NUM6 668 aa10.71□□□□□ -0.69
KLHL3-202ENST00000447439 ZNF771Q7L3S4 317 aaPredicted RBP10.71□□□□□ -0.69
KLHL3-202ENST00000447439 NBPF5PQ86XG9 351 aaPredicted RBP10.71□□□□□ -0.69
KLHL3-202ENST00000447439 UBXN4Q92575 508 aa10.71□□□□□ -0.69
KLHL3-202ENST00000447439 DACH1Q9UI36 760 aa10.71□□□□□ -0.69
KLHL3-202ENST00000447439 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.71□□□□□ -0.69
KLHL3-202ENST00000447439 PHLPP2Q6ZVD8 1323 aa10.71□□□□□ -0.69
KLHL3-202ENST00000447439 GOLGB1Q14789 3259 aaKnown RBP10.71□□□□□ -0.69
KLHL3-202ENST00000447439 A0A1B0GTH6 734 aa10.71□□□□□ -0.69
KLHL3-202ENST00000447439 ZSCAN12O43309 604 aa10.71□□□□□ -0.69
KLHL3-202ENST00000447439 SCG2P13521 617 aa10.71□□□□□ -0.69
KLHL3-202ENST00000447439 CASP14P31944 242 aa10.71□□□□□ -0.69
KLHL3-202ENST00000447439 KCNJ6P48051 423 aa10.71□□□□□ -0.69
KLHL3-202ENST00000447439 TFAP4Q01664 338 aa10.71□□□□□ -0.69
KLHL3-202ENST00000447439 TEX35Q5T0J7 233 aa10.71□□□□□ -0.69
KLHL3-202ENST00000447439 RCSD1Q6JBY9 416 aa10.71□□□□□ -0.69
KLHL3-202ENST00000447439 FBXO33Q7Z6M2 555 aa10.71□□□□□ -0.69
KLHL3-202ENST00000447439 TAB2Q9NYJ8 693 aa10.71□□□□□ -0.69
KLHL3-202ENST00000447439 TRIM49BA6NDI0 452 aa10.71□□□□□ -0.7
KLHL3-202ENST00000447439 AKR1B15C9JRZ8 316 aaPredicted RBP10.71□□□□□ -0.7
KLHL3-202ENST00000447439 H2AFXP16104 143 aaPredicted RBP10.71□□□□□ -0.7
KLHL3-202ENST00000447439 FXR1P51114 621 aaKnown RBP eCLIP10.71□□□□□ -0.7
KLHL3-202ENST00000447439 DHX8Q14562 1220 aaKnown RBP10.71□□□□□ -0.7
KLHL3-202ENST00000447439 SPATA1Q5VX52 437 aa10.71□□□□□ -0.7
KLHL3-202ENST00000447439 SH3RF1Q7Z6J0 888 aa10.71□□□□□ -0.7
KLHL3-202ENST00000447439 ACRBPQ8NEB7 543 aa10.71□□□□□ -0.7
KLHL3-202ENST00000447439 SH3RF3Q8TEJ3 882 aaPredicted RBP10.71□□□□□ -0.7
KLHL3-202ENST00000447439 CRNKL1Q9BZJ0 848 aaKnown RBP10.71□□□□□ -0.7
KLHL3-202ENST00000447439 BRMS1Q9HCU9 246 aa10.71□□□□□ -0.7
KLHL3-202ENST00000447439 IL17RBQ9NRM6 502 aa10.71□□□□□ -0.7
KLHL3-202ENST00000447439 LAMB2P55268 1798 aa10.7□□□□□ -0.7
KLHL3-202ENST00000447439 GNPATO15228 680 aa10.7□□□□□ -0.7
KLHL3-202ENST00000447439 TADA3O75528 432 aa10.7□□□□□ -0.7
KLHL3-202ENST00000447439 ATP2C1P98194 919 aaPredicted RBP10.7□□□□□ -0.7
KLHL3-202ENST00000447439 SLC35G1Q2M3R5 365 aa10.7□□□□□ -0.7
KLHL3-202ENST00000447439 KANK3Q6NY19 840 aa10.7□□□□□ -0.7
KLHL3-202ENST00000447439 DZIP1Q86YF9 867 aaKnown RBP10.7□□□□□ -0.7
KLHL3-202ENST00000447439 KRT222Q8N1A0 295 aa10.7□□□□□ -0.7
KLHL3-202ENST00000447439 CCDC12Q8WUD4 166 aaPredicted RBP10.7□□□□□ -0.7
KLHL3-202ENST00000447439 RBM28Q9NW13 759 aaKnown RBP10.7□□□□□ -0.7
KLHL3-202ENST00000447439 STX10O60499 249 aa10.7□□□□□ -0.7
KLHL3-202ENST00000447439 SPATA31A5Q5VU36 1347 aa10.7□□□□□ -0.7
KLHL3-202ENST00000447439 SPATA31A7Q8IWB4 1347 aa10.7□□□□□ -0.7
KLHL3-202ENST00000447439 TRIML1Q8N9V2 468 aa10.7□□□□□ -0.7
KLHL3-202ENST00000447439 KIFC2Q96AC6 838 aa10.7□□□□□ -0.7
KLHL3-202ENST00000447439 ADD3Q9UEY8 706 aaKnown RBP10.7□□□□□ -0.7
KLHL3-202ENST00000447439 TFR2Q9UP52 801 aa10.7□□□□□ -0.7
KLHL3-202ENST00000447439 FHOD1Q9Y613 1164 aa10.7□□□□□ -0.7
KLHL3-202ENST00000447439 ROBO1Q9Y6N7 1651 aa10.7□□□□□ -0.7
KLHL3-202ENST00000447439 DDAH1O94760 285 aa10.69□□□□□ -0.7
KLHL3-202ENST00000447439 ERCC5P28715 1186 aaPredicted RBP10.69□□□□□ -0.7
KLHL3-202ENST00000447439 USP5P45974 858 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms