RNA–Protein interactions for RNA: ENST00000447024.5

SMARCE1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-206ENST00000447024 LRRC37A3O60309 1634 aa10.56□□□□□ -0.72
SMARCE1-206ENST00000447024 PRNPP04156 253 aa10.56□□□□□ -0.72
SMARCE1-206ENST00000447024 PEAR1Q5VY43 1037 aaPredicted RBP10.56□□□□□ -0.72
SMARCE1-206ENST00000447024 NFXL1Q6ZNB6 911 aa10.56□□□□□ -0.72
SMARCE1-206ENST00000447024 METTL22Q9BUU2 404 aaPredicted RBP10.56□□□□□ -0.72
SMARCE1-206ENST00000447024 PANK3Q9H999 370 aa10.56□□□□□ -0.72
SMARCE1-206ENST00000447024 KNSTRNQ9Y448 316 aa10.56□□□□□ -0.72
SMARCE1-206ENST00000447024 PLEKHG2Q9H7P9 1386 aa10.55□□□□□ -0.72
SMARCE1-206ENST00000447024 GSTM4Q03013 218 aa10.55□□□□□ -0.72
SMARCE1-206ENST00000447024 RRS1Q15050 365 aaKnown RBP10.55□□□□□ -0.72
SMARCE1-206ENST00000447024 POLR3GLQ9BT43 218 aa10.55□□□□□ -0.72
SMARCE1-206ENST00000447024 PEAK1Q9H792 1746 aa10.55□□□□□ -0.72
SMARCE1-206ENST00000447024 ANKRD26Q9UPS8 1709 aa10.55□□□□□ -0.72
SMARCE1-206ENST00000447024 WASHC2AQ641Q2 1341 aa10.55□□□□□ -0.72
SMARCE1-206ENST00000447024 PLSCR1O15162 318 aa10.54□□□□□ -0.72
SMARCE1-206ENST00000447024 TRIM37O94972 964 aa10.54□□□□□ -0.72
SMARCE1-206ENST00000447024 ADMP35318 185 aa10.54□□□□□ -0.72
SMARCE1-206ENST00000447024 DEFB132Q7Z7B7 95 aa10.54□□□□□ -0.72
SMARCE1-206ENST00000447024 VSIG10LQ86VR7 867 aa10.54□□□□□ -0.72
SMARCE1-206ENST00000447024 TBC1D32Q96NH3 1257 aa10.54□□□□□ -0.72
SMARCE1-206ENST00000447024 NRSN2Q9GZP1 204 aa10.54□□□□□ -0.72
SMARCE1-206ENST00000447024 KIF7Q2M1P5 1343 aa10.54□□□□□ -0.72
SMARCE1-206ENST00000447024 TNS1Q9HBL0 1735 aaKnown RBP10.53□□□□□ -0.72
SMARCE1-206ENST00000447024 METTL12A8MUP2 240 aa10.53□□□□□ -0.72
SMARCE1-206ENST00000447024 SOX4Q06945 474 aaPredicted RBP10.53□□□□□ -0.72
SMARCE1-206ENST00000447024 EHHADHQ08426 723 aa10.53□□□□□ -0.72
SMARCE1-206ENST00000447024 ZAR1Q86SH2 424 aa10.53□□□□□ -0.72
SMARCE1-206ENST00000447024 MARCH10Q8NA82 808 aaPredicted RBP10.53□□□□□ -0.72
SMARCE1-206ENST00000447024 EZH1Q92800 747 aaPredicted RBP10.53□□□□□ -0.72
SMARCE1-206ENST00000447024 CAMKK2Q96RR4 588 aa10.53□□□□□ -0.72
SMARCE1-206ENST00000447024 PRKAG2Q9UGJ0 569 aa10.53□□□□□ -0.72
SMARCE1-206ENST00000447024 MAP2P11137 1827 aaKnown RBP10.53□□□□□ -0.72
SMARCE1-206ENST00000447024 NPC1L1Q9UHC9 1359 aa10.52□□□□□ -0.72
SMARCE1-206ENST00000447024 RGPD3A6NKT7 1758 aaPredicted RBP10.52□□□□□ -0.72
SMARCE1-206ENST00000447024 RGPD4Q7Z3J3 1758 aa10.52□□□□□ -0.72
SMARCE1-206ENST00000447024 SBF2Q86WG5 1849 aa10.52□□□□□ -0.73
SMARCE1-206ENST00000447024 NPR3P17342 541 aa10.52□□□□□ -0.73
SMARCE1-206ENST00000447024 AAMPQ13685 434 aa10.52□□□□□ -0.73
SMARCE1-206ENST00000447024 CBLL1Q75N03 491 aa10.52□□□□□ -0.73
SMARCE1-206ENST00000447024 FBXL18Q96ME1 805 aa10.52□□□□□ -0.73
SMARCE1-206ENST00000447024 YIPF2Q9BWQ6 316 aa10.52□□□□□ -0.73
SMARCE1-206ENST00000447024 POLKQ9UBT6 870 aa10.52□□□□□ -0.73
SMARCE1-206ENST00000447024 SERPINA10Q9UK55 444 aa10.52□□□□□ -0.73
SMARCE1-206ENST00000447024 NCAPD2Q15021 1401 aa10.51□□□□□ -0.73
SMARCE1-206ENST00000447024 CYP26A1O43174 497 aa10.51□□□□□ -0.73
SMARCE1-206ENST00000447024 ADH5P11766 374 aa10.51□□□□□ -0.73
SMARCE1-206ENST00000447024 FBLN1P23142 703 aa10.51□□□□□ -0.73
SMARCE1-206ENST00000447024 HSP90AB2PQ58FF8 381 aa10.51□□□□□ -0.73
SMARCE1-206ENST00000447024 RAPGEF4Q8WZA2 1011 aa10.51□□□□□ -0.73
SMARCE1-206ENST00000447024 LTV1Q96GA3 475 aaPredicted RBP10.51□□□□□ -0.73
SMARCE1-206ENST00000447024 HMGB2P26583 209 aaKnown RBP10.5□□□□□ -0.73
SMARCE1-206ENST00000447024 SSFA2P28290 1259 aa10.5□□□□□ -0.73
SMARCE1-206ENST00000447024 USP5P45974 858 aa10.5□□□□□ -0.73
SMARCE1-206ENST00000447024 NBPF6Q5VWK0 638 aa10.5□□□□□ -0.73
SMARCE1-206ENST00000447024 MORC1Q86VD1 984 aa10.5□□□□□ -0.73
SMARCE1-206ENST00000447024 TP53INP2Q8IXH6 220 aa10.5□□□□□ -0.73
SMARCE1-206ENST00000447024 ZCRB1Q8TBF4 217 aaKnown RBP10.5□□□□□ -0.73
SMARCE1-206ENST00000447024 GATA6Q92908 595 aa10.5□□□□□ -0.73
SMARCE1-206ENST00000447024 NBPF4Q96M43 638 aa10.5□□□□□ -0.73
SMARCE1-206ENST00000447024 KAT6BQ8WYB5 2073 aa10.49□□□□□ -0.73
SMARCE1-206ENST00000447024 FAM170BA6NMN3 283 aa10.49□□□□□ -0.73
SMARCE1-206ENST00000447024 FZD6O60353 706 aa10.49□□□□□ -0.73
SMARCE1-206ENST00000447024 FZD5Q13467 585 aa10.49□□□□□ -0.73
SMARCE1-206ENST00000447024 BSDC1Q9NW68 430 aaPredicted RBP10.49□□□□□ -0.73
SMARCE1-206ENST00000447024 ACTL7BQ9Y614 415 aa10.49□□□□□ -0.73
SMARCE1-206ENST00000447024 TMEM88BA6NKF7 163 aa10.48□□□□□ -0.73
SMARCE1-206ENST00000447024 PPM1GO15355 546 aaPredicted RBP10.48□□□□□ -0.73
SMARCE1-206ENST00000447024 FAM13AO94988 1023 aa10.48□□□□□ -0.73
SMARCE1-206ENST00000447024 CTSBP07858 339 aa10.48□□□□□ -0.73
SMARCE1-206ENST00000447024 COL19A1Q14993 1142 aa10.48□□□□□ -0.73
SMARCE1-206ENST00000447024 EZH2Q15910 746 aaKnown RBP10.48□□□□□ -0.73
SMARCE1-206ENST00000447024 OGFOD2Q6N063 350 aa10.48□□□□□ -0.73
SMARCE1-206ENST00000447024 ZFYVE28Q9HCC9 887 aa10.48□□□□□ -0.73
SMARCE1-206ENST00000447024 EIF4EBP3O60516 100 aaPredicted RBP10.47□□□□□ -0.73
SMARCE1-206ENST00000447024 POLR3DP05423 398 aaPredicted RBP10.47□□□□□ -0.73
SMARCE1-206ENST00000447024 PCDH1Q08174 1060 aa10.47□□□□□ -0.73
SMARCE1-206ENST00000447024 GJD3Q8N144 294 aa10.47□□□□□ -0.73
SMARCE1-206ENST00000447024 PCDH11XQ9BZA7 1347 aa10.47□□□□□ -0.73
SMARCE1-206ENST00000447024 PCDH11YQ9BZA8 1340 aa10.47□□□□□ -0.73
SMARCE1-206ENST00000447024 ARID1BQ8NFD5 2236 aaPredicted RBP10.47□□□□□ -0.73
SMARCE1-206ENST00000447024 NHSQ6T4R5 1651 aa10.47□□□□□ -0.73
SMARCE1-206ENST00000447024 RREB1Q92766 1687 aa10.47□□□□□ -0.73
SMARCE1-206ENST00000447024 A0A096LPE4 126 aa10.46□□□□□ -0.73
SMARCE1-206ENST00000447024 A0A1W2PPZ6 126 aa10.46□□□□□ -0.73
SMARCE1-206ENST00000447024 RAB6AP20340 208 aa10.46□□□□□ -0.73
SMARCE1-206ENST00000447024 MAOBP27338 520 aa10.46□□□□□ -0.73
SMARCE1-206ENST00000447024 DDX54Q8TDD1 881 aaKnown RBP10.46□□□□□ -0.73
SMARCE1-206ENST00000447024 CLEC4MQ9H2X3 399 aaPredicted RBP10.46□□□□□ -0.73
SMARCE1-206ENST00000447024 SPG7Q9UQ90 795 aa10.46□□□□□ -0.73
SMARCE1-206ENST00000447024 MEGF6O75095 1541 aa10.46□□□□□ -0.74
SMARCE1-206ENST00000447024 RGPD2P0DJD1 1756 aa10.46□□□□□ -0.74
SMARCE1-206ENST00000447024 IGSF1Q8N6C5 1336 aa10.45□□□□□ -0.74
SMARCE1-206ENST00000447024 NFICP08651 508 aa10.45□□□□□ -0.74
SMARCE1-206ENST00000447024 EIF4A2Q14240 407 aaKnown RBP10.45□□□□□ -0.74
SMARCE1-206ENST00000447024 MAP7Q14244 749 aa10.45□□□□□ -0.74
SMARCE1-206ENST00000447024 ZNF423Q2M1K9 1284 aa10.45□□□□□ -0.74
SMARCE1-206ENST00000447024 FLCNQ8NFG4 579 aa10.45□□□□□ -0.74
SMARCE1-206ENST00000447024 CCDC87Q9NVE4 849 aa10.45□□□□□ -0.74
SMARCE1-206ENST00000447024 ITGB5P18084 799 aa10.44□□□□□ -0.74
SMARCE1-206ENST00000447024 TNNT2P45379 298 aaPredicted RBP10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms