RNA–Protein interactions for RNA: ENST00000446836.5

CCDC12-203, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-203ENST00000446836 MYH4Q9Y623 1939 aa12.82□□□□□ -0.36
CCDC12-203ENST00000446836 ERICH2A1L162 156 aa12.81□□□□□ -0.36
CCDC12-203ENST00000446836 TOP1P11387 765 aaKnown RBP12.81□□□□□ -0.36
CCDC12-203ENST00000446836 OSBPP22059 807 aa12.81□□□□□ -0.36
CCDC12-203ENST00000446836 HOXA7P31268 230 aaPredicted RBP12.81□□□□□ -0.36
CCDC12-203ENST00000446836 MCM5P33992 734 aa12.81□□□□□ -0.36
CCDC12-203ENST00000446836 GPAT2Q6NUI2 795 aa12.81□□□□□ -0.36
CCDC12-203ENST00000446836 GMCL1P1Q8NEA9 526 aa12.81□□□□□ -0.36
CCDC12-203ENST00000446836 ANKS1AQ92625 1134 aa12.81□□□□□ -0.36
CCDC12-203ENST00000446836 ZSCAN10Q96SZ4 725 aaPredicted RBP12.81□□□□□ -0.36
CCDC12-203ENST00000446836 PARK7Q99497 189 aaKnown RBP12.81□□□□□ -0.36
CCDC12-203ENST00000446836 RNF186Q9NXI6 227 aa12.81□□□□□ -0.36
CCDC12-203ENST00000446836 WDR19Q8NEZ3 1342 aa12.81□□□□□ -0.36
CCDC12-203ENST00000446836 USP17L15C9J2P7 530 aa12.8□□□□□ -0.36
CCDC12-203ENST00000446836 USP17L13C9JLJ4 530 aa12.8□□□□□ -0.36
CCDC12-203ENST00000446836 USP17L11C9JVI0 530 aa12.8□□□□□ -0.36
CCDC12-203ENST00000446836 USP17L18D6R9N7 530 aa12.8□□□□□ -0.36
CCDC12-203ENST00000446836 USP17L22D6RA61 530 aa12.8□□□□□ -0.36
CCDC12-203ENST00000446836 USP17L17D6RBQ6 530 aa12.8□□□□□ -0.36
CCDC12-203ENST00000446836 USP17L19D6RCP7 530 aa12.8□□□□□ -0.36
CCDC12-203ENST00000446836 USP17L20D6RJB6 530 aa12.8□□□□□ -0.36
CCDC12-203ENST00000446836 F5H6K3 240 aa12.8□□□□□ -0.36
CCDC12-203ENST00000446836 PDHXO00330 501 aa12.8□□□□□ -0.36
CCDC12-203ENST00000446836 WDR46O15213 610 aaKnown RBP12.8□□□□□ -0.36
CCDC12-203ENST00000446836 PSMA5P28066 241 aa12.8□□□□□ -0.36
CCDC12-203ENST00000446836 KLRC3Q07444 240 aa12.8□□□□□ -0.36
CCDC12-203ENST00000446836 USP17L24Q0WX57 530 aa12.8□□□□□ -0.36
CCDC12-203ENST00000446836 C8orf34Q49A92 452 aa12.8□□□□□ -0.36
CCDC12-203ENST00000446836 NOM1Q5C9Z4 860 aaKnown RBP12.8□□□□□ -0.36
CCDC12-203ENST00000446836 STOX1Q6ZVD7 989 aa12.8□□□□□ -0.36
CCDC12-203ENST00000446836 CLEC10AQ8IUN9 316 aa12.8□□□□□ -0.36
CCDC12-203ENST00000446836 MB21D2Q8IYB1 491 aaPredicted RBP12.8□□□□□ -0.36
CCDC12-203ENST00000446836 FAM43AQ8N2R8 423 aa12.8□□□□□ -0.36
CCDC12-203ENST00000446836 NEK1Q96PY6 1258 aa12.8□□□□□ -0.36
CCDC12-203ENST00000446836 ZFYVE28Q9HCC9 887 aa12.8□□□□□ -0.36
CCDC12-203ENST00000446836 NMT2O60551 498 aa12.79□□□□□ -0.36
CCDC12-203ENST00000446836 VCAM1P19320 739 aa12.79□□□□□ -0.36
CCDC12-203ENST00000446836 ANAPC15P60006 121 aa12.79□□□□□ -0.36
CCDC12-203ENST00000446836 TAF1CQ15572 869 aaPredicted RBP12.79□□□□□ -0.36
CCDC12-203ENST00000446836 ZYXQ15942 572 aaKnown RBP12.79□□□□□ -0.36
CCDC12-203ENST00000446836 TREML2Q5T2D2 321 aa12.79□□□□□ -0.36
CCDC12-203ENST00000446836 GTF3C2Q8WUA4 911 aaPredicted RBP12.79□□□□□ -0.36
CCDC12-203ENST00000446836 GMCL1Q96IK5 515 aa12.79□□□□□ -0.36
CCDC12-203ENST00000446836 TMEM87BQ96K49 555 aa12.79□□□□□ -0.36
CCDC12-203ENST00000446836 TAF6LQ9Y6J9 622 aa12.79□□□□□ -0.36
CCDC12-203ENST00000446836 TNKSO95271 1327 aa12.79□□□□□ -0.36
CCDC12-203ENST00000446836 IFIT3O14879 490 aaKnown RBP12.78□□□□□ -0.36
CCDC12-203ENST00000446836 TRPA1O75762 1119 aa12.78□□□□□ -0.36
CCDC12-203ENST00000446836 NDUFB10O96000 172 aa12.78□□□□□ -0.36
CCDC12-203ENST00000446836 GCLCP48506 637 aaPredicted RBP12.78□□□□□ -0.36
CCDC12-203ENST00000446836 IRX3P78415 501 aaPredicted RBP12.78□□□□□ -0.36
CCDC12-203ENST00000446836 IFIT1BQ5T764 474 aaKnown RBP12.78□□□□□ -0.36
CCDC12-203ENST00000446836 RCSD1Q6JBY9 416 aa12.78□□□□□ -0.36
CCDC12-203ENST00000446836 CYB5R4Q7L1T6 521 aa12.78□□□□□ -0.36
CCDC12-203ENST00000446836 DHX32Q7L7V1 743 aaKnown RBP12.78□□□□□ -0.36
CCDC12-203ENST00000446836 RASEFQ8IZ41 740 aa12.78□□□□□ -0.36
CCDC12-203ENST00000446836 LRRC47Q8N1G4 583 aaKnown RBP12.78□□□□□ -0.36
CCDC12-203ENST00000446836 TMTC2Q8N394 836 aa12.78□□□□□ -0.36
CCDC12-203ENST00000446836 ENAHQ8N8S7 591 aaPredicted RBP12.78□□□□□ -0.36
CCDC12-203ENST00000446836 TMEM47Q9BQJ4 181 aa12.78□□□□□ -0.36
CCDC12-203ENST00000446836 RPAP3Q9H6T3 665 aaPredicted RBP12.78□□□□□ -0.36
CCDC12-203ENST00000446836 KAT14Q9H8E8 782 aa12.78□□□□□ -0.36
CCDC12-203ENST00000446836 UPF2Q9HAU5 1272 aaKnown RBP12.78□□□□□ -0.36
CCDC12-203ENST00000446836 SNX14Q9Y5W7 946 aa12.78□□□□□ -0.36
CCDC12-203ENST00000446836 MYPNQ86TC9 1320 aa12.78□□□□□ -0.36
CCDC12-203ENST00000446836 PRC1O43663 620 aa12.77□□□□□ -0.37
CCDC12-203ENST00000446836 TLR2O60603 784 aa12.77□□□□□ -0.37
CCDC12-203ENST00000446836 HSPA1AP0DMV8 641 aaKnown RBP12.77□□□□□ -0.37
CCDC12-203ENST00000446836 HSPA1BP0DMV9 641 aaKnown RBP12.77□□□□□ -0.37
CCDC12-203ENST00000446836 CRHR2Q13324 411 aa12.77□□□□□ -0.37
CCDC12-203ENST00000446836 WTAPQ15007 396 aa12.77□□□□□ -0.37
CCDC12-203ENST00000446836 SEC23AQ15436 765 aa12.77□□□□□ -0.37
CCDC12-203ENST00000446836 SLFN13Q68D06 897 aa12.77□□□□□ -0.37
CCDC12-203ENST00000446836 CATSPERGQ6ZRH7 1159 aa12.77□□□□□ -0.37
CCDC12-203ENST00000446836 SMCR8Q8TEV9 937 aaPredicted RBP12.77□□□□□ -0.37
CCDC12-203ENST00000446836 DCAF4Q8WV16 495 aa12.77□□□□□ -0.37
CCDC12-203ENST00000446836 ZKSCAN3Q9BRR0 538 aa12.77□□□□□ -0.37
CCDC12-203ENST00000446836 TM6SF1Q9BZW5 370 aa12.77□□□□□ -0.37
CCDC12-203ENST00000446836 ASCC2Q9H1I8 757 aaPredicted RBP12.77□□□□□ -0.37
CCDC12-203ENST00000446836 HOXC10Q9NYD6 342 aa12.77□□□□□ -0.37
CCDC12-203ENST00000446836 RAD21O60216 631 aa12.76□□□□□ -0.37
CCDC12-203ENST00000446836 BMP3P12645 472 aa12.76□□□□□ -0.37
CCDC12-203ENST00000446836 LIFRP42702 1097 aa12.76□□□□□ -0.37
CCDC12-203ENST00000446836 SLC1A4P43007 532 aa12.76□□□□□ -0.37
CCDC12-203ENST00000446836 CTCFP49711 727 aaPredicted RBP12.76□□□□□ -0.37
CCDC12-203ENST00000446836 DGKZQ13574 1117 aa12.76□□□□□ -0.37
CCDC12-203ENST00000446836 COG2Q14746 738 aa12.76□□□□□ -0.37
CCDC12-203ENST00000446836 TMEM67Q5HYA8 995 aa12.76□□□□□ -0.37
CCDC12-203ENST00000446836 BLOC1S2Q6QNY1 142 aa12.76□□□□□ -0.37
CCDC12-203ENST00000446836 LBX2Q6XYB7 198 aa12.76□□□□□ -0.37
CCDC12-203ENST00000446836 SPICE1Q8N0Z3 855 aa12.76□□□□□ -0.37
CCDC12-203ENST00000446836 PNMA1Q8ND90 353 aa12.76□□□□□ -0.37
CCDC12-203ENST00000446836 NKX2-3Q8TAU0 364 aa12.76□□□□□ -0.37
CCDC12-203ENST00000446836 IL17RAQ96F46 866 aa12.76□□□□□ -0.37
CCDC12-203ENST00000446836 JAKMIP1Q96N16 626 aaKnown RBP12.76□□□□□ -0.37
CCDC12-203ENST00000446836 TANGO6Q9C0B7 1094 aa12.76□□□□□ -0.37
CCDC12-203ENST00000446836 PCNTO95613 3336 aa12.75□□□□□ -0.37
CCDC12-203ENST00000446836 PLA2G6O60733 806 aa12.75□□□□□ -0.37
CCDC12-203ENST00000446836 FDX1P10109 184 aa12.75□□□□□ -0.37
CCDC12-203ENST00000446836 ANTXR2P58335 489 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms