RNA–Protein interactions for RNA: ENST00000446636.5

CTTNBP2-208, Transcript of cortactin binding protein 2, human

TSL 5

Gene CTTNBP2, Length 4,250 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTTNBP2-208	ENST00000446636	NSUN4	Q96CB9	384 aa	Known RBP	11.16	□□□□□ -0.62
CTTNBP2-208	ENST00000446636	NRBP1	Q9UHY1	535 aa		11.16	□□□□□ -0.62
CTTNBP2-208	ENST00000446636	RIC1	Q4ADV7	1423 aa		11.16	□□□□□ -0.62
CTTNBP2-208	ENST00000446636	TCRBV5S4A2T	A0A5A2	114 aa		11.15	□□□□□ -0.62
CTTNBP2-208	ENST00000446636	ERMN	Q8TAM6	284 aa		11.15	□□□□□ -0.62
CTTNBP2-208	ENST00000446636	NOC3L	Q8WTT2	800 aa	Known RBP	11.15	□□□□□ -0.62
CTTNBP2-208	ENST00000446636	CACTIN	Q8WUQ7	758 aa	Known RBP	11.15	□□□□□ -0.62
CTTNBP2-208	ENST00000446636	PCDHB6	Q9Y5E3	794 aa		11.15	□□□□□ -0.62
CTTNBP2-208	ENST00000446636	SPATA31A6	Q5VVP1	1343 aa		11.15	□□□□□ -0.62
CTTNBP2-208	ENST00000446636	LAD1	O00515	517 aa		11.15	□□□□□ -0.62
CTTNBP2-208	ENST00000446636	GTPBP6	O43824	516 aa	Predicted RBP	11.15	□□□□□ -0.62
CTTNBP2-208	ENST00000446636	TNNI2	P48788	182 aa		11.15	□□□□□ -0.62
CTTNBP2-208	ENST00000446636	SBK1	Q52WX2	424 aa		11.15	□□□□□ -0.62
CTTNBP2-208	ENST00000446636	TMCO3	Q6UWJ1	677 aa		11.15	□□□□□ -0.62
CTTNBP2-208	ENST00000446636	SH3GLB2	Q9NR46	395 aa		11.15	□□□□□ -0.62
CTTNBP2-208	ENST00000446636	FANCL	Q9NW38	375 aa		11.15	□□□□□ -0.62
CTTNBP2-208	ENST00000446636	PCDHA4	Q9UN74	947 aa		11.15	□□□□□ -0.62
CTTNBP2-208	ENST00000446636	USP17L8	P0C7I0	530 aa		11.15	□□□□□ -0.62
CTTNBP2-208	ENST00000446636	LONRF3	Q496Y0	759 aa		11.15	□□□□□ -0.62
CTTNBP2-208	ENST00000446636	SEPT12	Q8IYM1	358 aa		11.15	□□□□□ -0.62
CTTNBP2-208	ENST00000446636	REXO1	Q8N1G1	1221 aa	Known RBP	11.15	□□□□□ -0.62
CTTNBP2-208	ENST00000446636	ENGASE	Q8NFI3	743 aa		11.15	□□□□□ -0.62
CTTNBP2-208	ENST00000446636	SYMPK	Q92797	1274 aa	Known RBP	11.15	□□□□□ -0.62
CTTNBP2-208	ENST00000446636	SPATA1	Q5VX52	437 aa		11.15	□□□□□ -0.63
CTTNBP2-208	ENST00000446636	IQCE	Q6IPM2	695 aa		11.15	□□□□□ -0.63
CTTNBP2-208	ENST00000446636	IGSF22	Q8N9C0	903 aa		11.15	□□□□□ -0.63
CTTNBP2-208	ENST00000446636	ZNF219	Q9P2Y4	722 aa	Predicted RBP	11.15	□□□□□ -0.63
CTTNBP2-208	ENST00000446636	CTNND2	Q9UQB3	1225 aa		11.15	□□□□□ -0.63
CTTNBP2-208	ENST00000446636	SALL1	Q9NSC2	1324 aa		11.14	□□□□□ -0.63
CTTNBP2-208	ENST00000446636	CLSTN1	O94985	981 aa		11.14	□□□□□ -0.63
CTTNBP2-208	ENST00000446636	ADCY7	P51828	1080 aa		11.14	□□□□□ -0.63
CTTNBP2-208	ENST00000446636	IQCB1	Q15051	598 aa		11.14	□□□□□ -0.63
CTTNBP2-208	ENST00000446636	HSP90B2P	Q58FF3	399 aa		11.14	□□□□□ -0.63
CTTNBP2-208	ENST00000446636	FAM182B	Q5T319	152 aa		11.14	□□□□□ -0.63
CTTNBP2-208	ENST00000446636	ENOX1	Q8TC92	643 aa	Known RBP	11.14	□□□□□ -0.63
CTTNBP2-208	ENST00000446636	TEKT1	Q969V4	418 aa		11.14	□□□□□ -0.63
CTTNBP2-208	ENST00000446636	HDAC9	Q9UKV0	1011 aa		11.14	□□□□□ -0.63
CTTNBP2-208	ENST00000446636	RGPD5	Q99666	1765 aa		11.14	□□□□□ -0.63
CTTNBP2-208	ENST00000446636	PSD	A5PKW4	1024 aa	Predicted RBP	11.14	□□□□□ -0.63
CTTNBP2-208	ENST00000446636	SMCO2	A6NFE2	343 aa		11.14	□□□□□ -0.63
CTTNBP2-208	ENST00000446636	CCNT1	O60563	726 aa	Known RBP	11.14	□□□□□ -0.63
CTTNBP2-208	ENST00000446636	NOM1	Q5C9Z4	860 aa	Known RBP	11.14	□□□□□ -0.63
CTTNBP2-208	ENST00000446636	SV2B	Q7L1I2	683 aa		11.14	□□□□□ -0.63
CTTNBP2-208	ENST00000446636	ZNF771	Q7L3S4	317 aa	Predicted RBP	11.14	□□□□□ -0.63
CTTNBP2-208	ENST00000446636	ERO1A	Q96HE7	468 aa		11.14	□□□□□ -0.63
CTTNBP2-208	ENST00000446636	TTF2	Q9UNY4	1162 aa	Known RBP	11.14	□□□□□ -0.63
CTTNBP2-208	ENST00000446636	USO1	O60763	962 aa	Known RBP	11.14	□□□□□ -0.63
CTTNBP2-208	ENST00000446636	PLEKHA8P1	O95397	391 aa		11.14	□□□□□ -0.63
CTTNBP2-208	ENST00000446636	ARL6IP4	Q66PJ3	421 aa	Known RBP	11.14	□□□□□ -0.63
CTTNBP2-208	ENST00000446636	SYT10	Q6XYQ8	523 aa		11.14	□□□□□ -0.63
CTTNBP2-208	ENST00000446636	EHBP1	Q8NDI1	1231 aa		11.14	□□□□□ -0.63
CTTNBP2-208	ENST00000446636	GBP3	Q9H0R5	595 aa		11.14	□□□□□ -0.63
CTTNBP2-208	ENST00000446636	QTRT2	Q9H974	415 aa	Known RBP	11.14	□□□□□ -0.63
CTTNBP2-208	ENST00000446636	SPTLC3	Q9NUV7	552 aa		11.14	□□□□□ -0.63
CTTNBP2-208	ENST00000446636	KCP	Q6ZWJ8	1503 aa		11.14	□□□□□ -0.63
CTTNBP2-208	ENST00000446636	TRIM21	P19474	475 aa	Known RBP	11.13	□□□□□ -0.63
CTTNBP2-208	ENST00000446636	CYLC1	P35663	651 aa	Predicted RBP	11.13	□□□□□ -0.63
CTTNBP2-208	ENST00000446636	CACNA2D4	Q7Z3S7	1137 aa		11.13	□□□□□ -0.63
CTTNBP2-208	ENST00000446636	GJD4	Q96KN9	370 aa	Predicted RBP	11.13	□□□□□ -0.63
CTTNBP2-208	ENST00000446636	NAA15	Q9BXJ9	866 aa	Known RBP	11.13	□□□□□ -0.63
CTTNBP2-208	ENST00000446636	MAGEF1	Q9HAY2	307 aa		11.13	□□□□□ -0.63
CTTNBP2-208	ENST00000446636	GPCPD1	Q9NPB8	672 aa		11.13	□□□□□ -0.63
CTTNBP2-208	ENST00000446636	USP40	Q9NVE5	1235 aa		11.13	□□□□□ -0.63
CTTNBP2-208	ENST00000446636	MAN1B1	Q9UKM7	699 aa		11.13	□□□□□ -0.63
CTTNBP2-208	ENST00000446636	POTEB2	H3BUK9	544 aa		11.13	□□□□□ -0.63
CTTNBP2-208	ENST00000446636	hCG_1984214	I3L0E3	225 aa		11.13	□□□□□ -0.63
CTTNBP2-208	ENST00000446636	PPEF1	O14829	653 aa	Predicted RBP	11.13	□□□□□ -0.63
CTTNBP2-208	ENST00000446636	TUBB4B	P68371	445 aa		11.13	□□□□□ -0.63
CTTNBP2-208	ENST00000446636	UBXN1	Q04323	297 aa		11.13	□□□□□ -0.63
CTTNBP2-208	ENST00000446636	PFKFB3	Q16875	520 aa	Predicted RBP	11.13	□□□□□ -0.63
CTTNBP2-208	ENST00000446636	SLC27A3	Q5K4L6	730 aa		11.13	□□□□□ -0.63
CTTNBP2-208	ENST00000446636	CNNM4	Q6P4Q7	775 aa		11.13	□□□□□ -0.63
CTTNBP2-208	ENST00000446636	ZNF713	Q8N859	430 aa	Predicted RBP	11.13	□□□□□ -0.63
CTTNBP2-208	ENST00000446636	NFIX	Q14938	502 aa		11.13	□□□□□ -0.63
CTTNBP2-208	ENST00000446636	SHC4	Q6S5L8	630 aa		11.13	□□□□□ -0.63
CTTNBP2-208	ENST00000446636	CABP7	Q86V35	215 aa		11.13	□□□□□ -0.63
CTTNBP2-208	ENST00000446636	FCHSD1	Q86WN1	690 aa		11.13	□□□□□ -0.63
CTTNBP2-208	ENST00000446636	TRMT44	Q8IYL2	757 aa	Known RBP	11.13	□□□□□ -0.63
CTTNBP2-208	ENST00000446636	CUEDC2	Q9H467	287 aa		11.13	□□□□□ -0.63
CTTNBP2-208	ENST00000446636	PDS5A	Q29RF7	1337 aa	Known RBP	11.13	□□□□□ -0.63
CTTNBP2-208	ENST00000446636		A0A087WWV3	80 aa		11.12	□□□□□ -0.63
CTTNBP2-208	ENST00000446636		H0YIN7	160 aa		11.12	□□□□□ -0.63
CTTNBP2-208	ENST00000446636	PPP1R12B	O60237	982 aa	Predicted RBP	11.12	□□□□□ -0.63
CTTNBP2-208	ENST00000446636	WDHD1	O75717	1129 aa	Predicted RBP	11.12	□□□□□ -0.63
CTTNBP2-208	ENST00000446636	TNIP1	Q15025	636 aa		11.12	□□□□□ -0.63
CTTNBP2-208	ENST00000446636	DIXDC1	Q155Q3	683 aa		11.12	□□□□□ -0.63
CTTNBP2-208	ENST00000446636	JAKMIP3	Q5VZ66	844 aa		11.12	□□□□□ -0.63
CTTNBP2-208	ENST00000446636	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	11.12	□□□□□ -0.63
CTTNBP2-208	ENST00000446636	CCDC51	Q96ER9	411 aa		11.12	□□□□□ -0.63
CTTNBP2-208	ENST00000446636	CD209	Q9NNX6	404 aa		11.12	□□□□□ -0.63
CTTNBP2-208	ENST00000446636	SWAP70	Q9UH65	585 aa		11.12	□□□□□ -0.63
CTTNBP2-208	ENST00000446636	CCDC40	Q4G0X9	1142 aa		11.12	□□□□□ -0.63
CTTNBP2-208	ENST00000446636	NEK8	Q86SG6	692 aa		11.12	□□□□□ -0.63
CTTNBP2-208	ENST00000446636	OGFOD1	Q8N543	542 aa		11.12	□□□□□ -0.63
CTTNBP2-208	ENST00000446636	UBE2Q2	Q8WVN8	375 aa		11.12	□□□□□ -0.63
CTTNBP2-208	ENST00000446636	LUC7L2	Q9Y383	392 aa	Known RBP	11.12	□□□□□ -0.63
CTTNBP2-208	ENST00000446636	OR52Z1	P0C646	297 aa		11.12	□□□□□ -0.63
CTTNBP2-208	ENST00000446636	INF2	Q27J81	1249 aa		11.12	□□□□□ -0.63
CTTNBP2-208	ENST00000446636	ASPRV1	Q53RT3	343 aa		11.12	□□□□□ -0.63
CTTNBP2-208	ENST00000446636	CCDC17	Q96LX7	622 aa		11.12	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms