RNA–Protein interactions for RNA: ENST00000446054.1

HMGN2P11-201, Transcript of high mobility group nucleosomal binding domain 2 pseudogene 11, humanhuman

BASIC

Gene HMGN2P11, Length 403 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P11-201ENST00000446054 ATP2B2Q01814 1243 aa13.15□□□□□ -0.3
HMGN2P11-201ENST00000446054 COG2Q14746 738 aa13.15□□□□□ -0.3
HMGN2P11-201ENST00000446054 MORN1Q5T089 497 aa13.15□□□□□ -0.3
HMGN2P11-201ENST00000446054 LBX2Q6XYB7 198 aa13.15□□□□□ -0.3
HMGN2P11-201ENST00000446054 UBE2Q1Q7Z7E8 422 aa13.15□□□□□ -0.3
HMGN2P11-201ENST00000446054 FSD1Q9BTV5 496 aa13.15□□□□□ -0.3
HMGN2P11-201ENST00000446054 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.15□□□□□ -0.3
HMGN2P11-201ENST00000446054 TANGO6Q9C0B7 1094 aa13.15□□□□□ -0.3
HMGN2P11-201ENST00000446054 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.15□□□□□ -0.3
HMGN2P11-201ENST00000446054 TMX2Q9Y320 296 aa13.15□□□□□ -0.3
HMGN2P11-201ENST00000446054 PATL2C9JE40 543 aaKnown RBP13.14□□□□□ -0.31
HMGN2P11-201ENST00000446054 APPP05067 770 aa13.14□□□□□ -0.31
HMGN2P11-201ENST00000446054 HDAC1Q13547 482 aaPredicted RBP13.14□□□□□ -0.31
HMGN2P11-201ENST00000446054 CCL14Q16627 93 aa13.14□□□□□ -0.31
HMGN2P11-201ENST00000446054 WDR78Q5VTH9 848 aa13.14□□□□□ -0.31
HMGN2P11-201ENST00000446054 GIMAP6Q6P9H5 292 aa13.14□□□□□ -0.31
HMGN2P11-201ENST00000446054 SOCS4Q8WXH5 440 aa13.14□□□□□ -0.31
HMGN2P11-201ENST00000446054 GCC1Q96CN9 775 aa13.14□□□□□ -0.31
HMGN2P11-201ENST00000446054 VCPKMTQ9H867 229 aa13.14□□□□□ -0.31
HMGN2P11-201ENST00000446054 CWC22Q9HCG8 908 aaKnown RBP13.14□□□□□ -0.31
HMGN2P11-201ENST00000446054 ZBTB47Q9UFB7 747 aaPredicted RBP13.14□□□□□ -0.31
HMGN2P11-201ENST00000446054 RPTORQ8N122 1335 aa13.13□□□□□ -0.31
HMGN2P11-201ENST00000446054 FARP2O94887 1054 aaPredicted RBP13.13□□□□□ -0.31
HMGN2P11-201ENST00000446054 XRCC5P13010 732 aaKnown RBP13.13□□□□□ -0.31
HMGN2P11-201ENST00000446054 GNAT2P19087 354 aa13.13□□□□□ -0.31
HMGN2P11-201ENST00000446054 RASA1P20936 1047 aa13.13□□□□□ -0.31
HMGN2P11-201ENST00000446054 TDO2P48775 406 aa13.13□□□□□ -0.31
HMGN2P11-201ENST00000446054 CCNA1P78396 465 aa13.13□□□□□ -0.31
HMGN2P11-201ENST00000446054 ZMYM1Q5SVZ6 1142 aa13.13□□□□□ -0.31
HMGN2P11-201ENST00000446054 SAMD1Q6SPF0 538 aaPredicted RBP13.13□□□□□ -0.31
HMGN2P11-201ENST00000446054 IFNL3Q8IZI9 196 aa13.13□□□□□ -0.31
HMGN2P11-201ENST00000446054 LPAR1Q92633 364 aa13.13□□□□□ -0.31
HMGN2P11-201ENST00000446054 DPF3Q92784 378 aa13.13□□□□□ -0.31
HMGN2P11-201ENST00000446054 CRISPLD2Q9H0B8 497 aa13.13□□□□□ -0.31
HMGN2P11-201ENST00000446054 KANSL2Q9H9L4 492 aa13.13□□□□□ -0.31
HMGN2P11-201ENST00000446054 MKNK2Q9HBH9 465 aa13.13□□□□□ -0.31
HMGN2P11-201ENST00000446054 HMX1Q9NP08 348 aaPredicted RBP13.13□□□□□ -0.31
HMGN2P11-201ENST00000446054 HOXC10Q9NYD6 342 aa13.13□□□□□ -0.31
HMGN2P11-201ENST00000446054 GREB1LQ9C091 1923 aaPredicted RBP13.12□□□□□ -0.31
HMGN2P11-201ENST00000446054 PARP14Q460N5 1801 aa13.12□□□□□ -0.31
HMGN2P11-201ENST00000446054 H0YGN5 161 aa13.12□□□□□ -0.31
HMGN2P11-201ENST00000446054 PRDM1O75626 825 aa13.12□□□□□ -0.31
HMGN2P11-201ENST00000446054 FLOT1O75955 427 aa13.12□□□□□ -0.31
HMGN2P11-201ENST00000446054 PRKAR2AP13861 404 aaKnown RBP13.12□□□□□ -0.31
HMGN2P11-201ENST00000446054 PTPREP23469 700 aa13.12□□□□□ -0.31
HMGN2P11-201ENST00000446054 DSG3P32926 999 aa13.12□□□□□ -0.31
HMGN2P11-201ENST00000446054 RGS2P41220 211 aa13.12□□□□□ -0.31
HMGN2P11-201ENST00000446054 MAP2K5Q13163 448 aa13.12□□□□□ -0.31
HMGN2P11-201ENST00000446054 LRRFIP1Q32MZ4 808 aaKnown RBP13.12□□□□□ -0.31
HMGN2P11-201ENST00000446054 MAP3K21Q5TCX8 1036 aa13.12□□□□□ -0.31
HMGN2P11-201ENST00000446054 CCDC129Q6ZRS4 1044 aa13.12□□□□□ -0.31
HMGN2P11-201ENST00000446054 ATG4CQ96DT6 458 aa13.12□□□□□ -0.31
HMGN2P11-201ENST00000446054 MOV10L1Q9BXT6 1211 aaKnown RBP13.12□□□□□ -0.31
HMGN2P11-201ENST00000446054 SH2D4AQ9H788 454 aa13.12□□□□□ -0.31
HMGN2P11-201ENST00000446054 STAP2Q9UGK3 403 aa13.12□□□□□ -0.31
HMGN2P11-201ENST00000446054 ROBO3Q96MS0 1386 aa13.11□□□□□ -0.31
HMGN2P11-201ENST00000446054 SLC15A5A6NIM6 579 aa13.11□□□□□ -0.31
HMGN2P11-201ENST00000446054 RAD21O60216 631 aa13.11□□□□□ -0.31
HMGN2P11-201ENST00000446054 SLC34A2O95436 690 aa13.11□□□□□ -0.31
HMGN2P11-201ENST00000446054 ZKSCAN1P17029 563 aaPredicted RBP13.11□□□□□ -0.31
HMGN2P11-201ENST00000446054 PDE1AP54750 535 aa13.11□□□□□ -0.31
HMGN2P11-201ENST00000446054 CACNB2Q08289 660 aaPredicted RBP13.11□□□□□ -0.31
HMGN2P11-201ENST00000446054 PLS1Q14651 629 aa13.11□□□□□ -0.31
HMGN2P11-201ENST00000446054 B4GALNT3Q6L9W6 998 aa13.11□□□□□ -0.31
HMGN2P11-201ENST00000446054 EXOC6Q8TAG9 804 aa13.11□□□□□ -0.31
HMGN2P11-201ENST00000446054 NPLOC4Q8TAT6 608 aa13.11□□□□□ -0.31
HMGN2P11-201ENST00000446054 DIS3LQ8TF46 1054 aaKnown RBP13.11□□□□□ -0.31
HMGN2P11-201ENST00000446054 PAWRQ96IZ0 340 aaKnown RBP13.11□□□□□ -0.31
HMGN2P11-201ENST00000446054 APBA2Q99767 749 aa13.11□□□□□ -0.31
HMGN2P11-201ENST00000446054 LNPKQ9C0E8 428 aa13.11□□□□□ -0.31
HMGN2P11-201ENST00000446054 SPATC1LQ9H0A9 340 aa13.11□□□□□ -0.31
HMGN2P11-201ENST00000446054 FBXO28Q9NVF7 368 aa13.11□□□□□ -0.31
HMGN2P11-201ENST00000446054 FLRT1Q9NZU1 646 aa13.11□□□□□ -0.31
HMGN2P11-201ENST00000446054 COL11A1P12107 1806 aaPredicted RBP13.11□□□□□ -0.31
HMGN2P11-201ENST00000446054 A0A0G2JMZ2 1700 aa13.1□□□□□ -0.31
HMGN2P11-201ENST00000446054 WDR46O15213 610 aaKnown RBP13.1□□□□□ -0.31
HMGN2P11-201ENST00000446054 FOXP2O15409 715 aa13.1□□□□□ -0.31
HMGN2P11-201ENST00000446054 IGHDP01880 384 aa13.1□□□□□ -0.31
HMGN2P11-201ENST00000446054 CCND3P30281 292 aaPredicted RBP13.1□□□□□ -0.31
HMGN2P11-201ENST00000446054 GRB14Q14449 540 aa13.1□□□□□ -0.31
HMGN2P11-201ENST00000446054 TRMT44Q8IYL2 757 aaKnown RBP13.1□□□□□ -0.31
HMGN2P11-201ENST00000446054 ZNF444Q8N0Y2 327 aaPredicted RBP13.1□□□□□ -0.31
HMGN2P11-201ENST00000446054 HTATIP2Q9BUP3 242 aa13.1□□□□□ -0.31
HMGN2P11-201ENST00000446054 GOPCQ9HD26 462 aa13.1□□□□□ -0.31
HMGN2P11-201ENST00000446054 IVNS1ABPQ9Y6Y0 642 aa13.1□□□□□ -0.31
HMGN2P11-201ENST00000446054 IGKV6D-41A0A0C4DH26 115 aa13.09□□□□□ -0.31
HMGN2P11-201ENST00000446054 ERCC3P19447 782 aa13.09□□□□□ -0.31
HMGN2P11-201ENST00000446054 MNX1P50219 401 aaPredicted RBP13.09□□□□□ -0.31
HMGN2P11-201ENST00000446054 FAM83BQ5T0W9 1011 aa13.09□□□□□ -0.31
HMGN2P11-201ENST00000446054 SMC5Q8IY18 1101 aa13.09□□□□□ -0.31
HMGN2P11-201ENST00000446054 MB21D1Q8N884 522 aa13.09□□□□□ -0.31
HMGN2P11-201ENST00000446054 EVI5LQ96CN4 794 aa13.09□□□□□ -0.31
HMGN2P11-201ENST00000446054 NUP88Q99567 741 aaPredicted RBP13.09□□□□□ -0.31
HMGN2P11-201ENST00000446054 NACAP1Q9BZK3 213 aa13.09□□□□□ -0.31
HMGN2P11-201ENST00000446054 NAPBQ9H115 298 aa13.09□□□□□ -0.31
HMGN2P11-201ENST00000446054 RWDD1Q9H446 243 aaPredicted RBP13.09□□□□□ -0.31
HMGN2P11-201ENST00000446054 NYAP2Q9P242 653 aa13.09□□□□□ -0.31
HMGN2P11-201ENST00000446054 CLIP2Q9UDT6 1046 aa13.09□□□□□ -0.31
HMGN2P11-201ENST00000446054 MYH4Q9Y623 1939 aa13.09□□□□□ -0.31
HMGN2P11-201ENST00000446054 ZNFX1Q9P2E3 1918 aaKnown RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms