RNA–Protein interactions for RNA: ENST00000445609.6

NPHP1-207, Transcript of nephrocystin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP1, Length 2,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-207ENST00000445609 GJB2P29033 226 aa11.09□□□□□ -0.63
NPHP1-207ENST00000445609 HMGN5P82970 282 aaKnown RBP11.09□□□□□ -0.63
NPHP1-207ENST00000445609 SCYL3Q8IZE3 742 aa11.09□□□□□ -0.63
NPHP1-207ENST00000445609 SMARCC2Q8TAQ2 1214 aa11.09□□□□□ -0.63
NPHP1-207ENST00000445609 FZD1Q9UP38 647 aa11.09□□□□□ -0.63
NPHP1-207ENST00000445609 MTMR7Q9Y216 660 aa11.09□□□□□ -0.63
NPHP1-207ENST00000445609 PTPDC1A2A3K4 754 aa11.09□□□□□ -0.63
NPHP1-207ENST00000445609 JAK2O60674 1132 aa11.09□□□□□ -0.63
NPHP1-207ENST00000445609 DTNBO60941 627 aa11.09□□□□□ -0.63
NPHP1-207ENST00000445609 DDIT3P35638 169 aa11.09□□□□□ -0.63
NPHP1-207ENST00000445609 GRM4Q14833 912 aa11.09□□□□□ -0.63
NPHP1-207ENST00000445609 NTRK3Q16288 839 aa11.09□□□□□ -0.63
NPHP1-207ENST00000445609 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.09□□□□□ -0.63
NPHP1-207ENST00000445609 ZKSCAN4Q969J2 545 aaPredicted RBP11.09□□□□□ -0.63
NPHP1-207ENST00000445609 PICK1Q9NRD5 415 aa11.09□□□□□ -0.63
NPHP1-207ENST00000445609 A0A1W2PRG0 241 aa11.08□□□□□ -0.64
NPHP1-207ENST00000445609 USP17L5A8MUK1 530 aa11.08□□□□□ -0.64
NPHP1-207ENST00000445609 IFNAR1P17181 557 aa11.08□□□□□ -0.64
NPHP1-207ENST00000445609 IREB2P48200 963 aaKnown RBP11.08□□□□□ -0.64
NPHP1-207ENST00000445609 GNAQP50148 359 aa11.08□□□□□ -0.64
NPHP1-207ENST00000445609 MAP3K9P80192 1104 aa11.08□□□□□ -0.64
NPHP1-207ENST00000445609 DDX11Q96FC9 970 aa11.08□□□□□ -0.64
NPHP1-207ENST00000445609 SH2D4AQ9H788 454 aa11.08□□□□□ -0.64
NPHP1-207ENST00000445609 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.08□□□□□ -0.64
NPHP1-207ENST00000445609 TMX2Q9Y320 296 aa11.08□□□□□ -0.64
NPHP1-207ENST00000445609 PALM3A6NDB9 673 aaPredicted RBP11.08□□□□□ -0.64
NPHP1-207ENST00000445609 PARP1P09874 1014 aaKnown RBP11.08□□□□□ -0.64
NPHP1-207ENST00000445609 SNHG28P0DPA3 235 aa11.08□□□□□ -0.64
NPHP1-207ENST00000445609 PDHBP11177 359 aa11.08□□□□□ -0.64
NPHP1-207ENST00000445609 NOL9Q5SY16 702 aaKnown RBP11.08□□□□□ -0.64
NPHP1-207ENST00000445609 USP17L2Q6R6M4 530 aa11.08□□□□□ -0.64
NPHP1-207ENST00000445609 TMTC3Q6ZXV5 915 aa11.08□□□□□ -0.64
NPHP1-207ENST00000445609 GMCL1P1Q8NEA9 526 aa11.08□□□□□ -0.64
NPHP1-207ENST00000445609 ACER1Q8TDN7 264 aa11.08□□□□□ -0.64
NPHP1-207ENST00000445609 MAD2L2Q9UI95 211 aa11.08□□□□□ -0.64
NPHP1-207ENST00000445609 CIZ1Q9ULV3 898 aaPredicted RBP11.08□□□□□ -0.64
NPHP1-207ENST00000445609 KIF3AQ9Y496 699 aa11.08□□□□□ -0.64
NPHP1-207ENST00000445609 F5H6K3 240 aa11.07□□□□□ -0.64
NPHP1-207ENST00000445609 PPFIA3O75145 1194 aa11.07□□□□□ -0.64
NPHP1-207ENST00000445609 ECE1P42892 770 aa11.07□□□□□ -0.64
NPHP1-207ENST00000445609 KLRC3Q07444 240 aa11.07□□□□□ -0.64
NPHP1-207ENST00000445609 SSRP1Q08945 709 aaKnown RBP11.07□□□□□ -0.64
NPHP1-207ENST00000445609 SLFN13Q68D06 897 aa11.07□□□□□ -0.64
NPHP1-207ENST00000445609 CMTR1Q8N1G2 835 aaKnown RBP11.07□□□□□ -0.64
NPHP1-207ENST00000445609 STAG2Q8N3U4 1231 aa11.07□□□□□ -0.64
NPHP1-207ENST00000445609 CCDC82Q8N4S0 544 aa11.07□□□□□ -0.64
NPHP1-207ENST00000445609 FAM184AQ8NB25 1140 aa11.07□□□□□ -0.64
NPHP1-207ENST00000445609 LZTS2Q9BRK4 669 aa11.07□□□□□ -0.64
NPHP1-207ENST00000445609 GREB1LQ9C091 1923 aaPredicted RBP11.07□□□□□ -0.64
NPHP1-207ENST00000445609 ORC3Q9UBD5 711 aaPredicted RBP11.07□□□□□ -0.64
NPHP1-207ENST00000445609 MYH8P13535 1937 aa11.07□□□□□ -0.64
NPHP1-207ENST00000445609 TRAF5O00463 557 aa11.07□□□□□ -0.64
NPHP1-207ENST00000445609 RAD21O60216 631 aa11.07□□□□□ -0.64
NPHP1-207ENST00000445609 PLEKHA8P1O95397 391 aa11.07□□□□□ -0.64
NPHP1-207ENST00000445609 PTPRAP18433 802 aa11.07□□□□□ -0.64
NPHP1-207ENST00000445609 TTLL12Q14166 644 aaPredicted RBP11.07□□□□□ -0.64
NPHP1-207ENST00000445609 MAP3K11Q16584 847 aa11.07□□□□□ -0.64
NPHP1-207ENST00000445609 ASPRV1Q53RT3 343 aa11.07□□□□□ -0.64
NPHP1-207ENST00000445609 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.07□□□□□ -0.64
NPHP1-207ENST00000445609 CCDC84Q86UT8 332 aaPredicted RBP11.07□□□□□ -0.64
NPHP1-207ENST00000445609 TRIM22Q8IYM9 498 aa11.07□□□□□ -0.64
NPHP1-207ENST00000445609 PHKBQ93100 1093 aa11.07□□□□□ -0.64
NPHP1-207ENST00000445609 CHMP5Q9NZZ3 219 aa11.07□□□□□ -0.64
NPHP1-207ENST00000445609 CSADQ9Y600 493 aa11.07□□□□□ -0.64
NPHP1-207ENST00000445609 KLRF2D3W0D1 207 aa11.06□□□□□ -0.64
NPHP1-207ENST00000445609 FMNL1O95466 1100 aaPredicted RBP11.06□□□□□ -0.64
NPHP1-207ENST00000445609 GOLGA8HP0CJ92 632 aa11.06□□□□□ -0.64
NPHP1-207ENST00000445609 FDPSP14324 419 aaKnown RBP11.06□□□□□ -0.64
NPHP1-207ENST00000445609 PDCP20941 246 aa11.06□□□□□ -0.64
NPHP1-207ENST00000445609 SLC1A4P43007 532 aa11.06□□□□□ -0.64
NPHP1-207ENST00000445609 FUT2Q10981 343 aa11.06□□□□□ -0.64
NPHP1-207ENST00000445609 GPATCH4Q5T3I0 446 aaKnown RBP11.06□□□□□ -0.64
NPHP1-207ENST00000445609 ARMC9Q7Z3E5 817 aa11.06□□□□□ -0.64
NPHP1-207ENST00000445609 NBPF11Q86T75 865 aa11.06□□□□□ -0.64
NPHP1-207ENST00000445609 SRBD1Q8N5C6 995 aaKnown RBP11.06□□□□□ -0.64
NPHP1-207ENST00000445609 DCAF4Q8WV16 495 aa11.06□□□□□ -0.64
NPHP1-207ENST00000445609 GMCL1Q96IK5 515 aa11.06□□□□□ -0.64
NPHP1-207ENST00000445609 WDR18Q9BV38 432 aa11.06□□□□□ -0.64
NPHP1-207ENST00000445609 SLC26A6Q9BXS9 759 aa11.06□□□□□ -0.64
NPHP1-207ENST00000445609 AS3MTQ9HBK9 375 aa11.06□□□□□ -0.64
NPHP1-207ENST00000445609 GPBP1L1Q9HC44 474 aaPredicted RBP11.06□□□□□ -0.64
NPHP1-207ENST00000445609 GOPCQ9HD26 462 aa11.06□□□□□ -0.64
NPHP1-207ENST00000445609 NDUFB10O96000 172 aa11.06□□□□□ -0.64
NPHP1-207ENST00000445609 PDIA4P13667 645 aaKnown RBP11.06□□□□□ -0.64
NPHP1-207ENST00000445609 ZNF543Q08ER8 600 aa11.06□□□□□ -0.64
NPHP1-207ENST00000445609 VGLL4Q14135 290 aa11.06□□□□□ -0.64
NPHP1-207ENST00000445609 LARP1BQ659C4 914 aaKnown RBP11.06□□□□□ -0.64
NPHP1-207ENST00000445609 CHADLQ6NUI6 762 aa11.06□□□□□ -0.64
NPHP1-207ENST00000445609 RASGRP2Q7LDG7 609 aa11.06□□□□□ -0.64
NPHP1-207ENST00000445609 ANKRD13AQ8IZ07 590 aa11.06□□□□□ -0.64
NPHP1-207ENST00000445609 FEZ1Q99689 392 aa11.06□□□□□ -0.64
NPHP1-207ENST00000445609 RNF26Q9BY78 433 aaPredicted RBP11.06□□□□□ -0.64
NPHP1-207ENST00000445609 ZHX2Q9Y6X8 837 aa11.06□□□□□ -0.64
NPHP1-207ENST00000445609 POLR2AP24928 1970 aaKnown RBP11.06□□□□□ -0.64
NPHP1-207ENST00000445609 FRMPD2Q68DX3 1309 aaPredicted RBP11.05□□□□□ -0.64
NPHP1-207ENST00000445609 STK36Q9NRP7 1315 aa11.05□□□□□ -0.64
NPHP1-207ENST00000445609 PRPF3O43395 683 aaKnown RBP11.05□□□□□ -0.64
NPHP1-207ENST00000445609 SYT1P21579 422 aa11.05□□□□□ -0.64
NPHP1-207ENST00000445609 SMARCA1P28370 1054 aa11.05□□□□□ -0.64
NPHP1-207ENST00000445609 NUCB2P80303 420 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms