RNA–Protein interactions for RNA: ENST00000445336.2

BRAFP1-201, Transcript of BRAF pseudogene 1, humanhuman

BASIC

Gene BRAFP1, Length 2,703 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP1-201ENST00000445336 FAM205CA6NFA0 338 aa8.4□□□□□ -1.06
BRAFP1-201ENST00000445336 STRNO43815 780 aa8.4□□□□□ -1.06
BRAFP1-201ENST00000445336 CABYRO75952 493 aa8.4□□□□□ -1.06
BRAFP1-201ENST00000445336 PCSK9Q8NBP7 692 aaKnown RBP8.4□□□□□ -1.06
BRAFP1-201ENST00000445336 SUGCTQ9HAC7 445 aa8.4□□□□□ -1.06
BRAFP1-201ENST00000445336 RAI2Q9Y5P3 530 aa8.4□□□□□ -1.06
BRAFP1-201ENST00000445336 TCP10L2B9ZVM9 353 aa8.4□□□□□ -1.06
BRAFP1-201ENST00000445336 ACRP10323 421 aa8.4□□□□□ -1.06
BRAFP1-201ENST00000445336 MYOGP15173 224 aa8.4□□□□□ -1.06
BRAFP1-201ENST00000445336 CCSAPQ6IQ19 270 aaPredicted RBP8.4□□□□□ -1.06
BRAFP1-201ENST00000445336 HHIPL2Q6UWX4 724 aa8.4□□□□□ -1.06
BRAFP1-201ENST00000445336 MINPP1Q9UNW1 487 aa8.4□□□□□ -1.06
BRAFP1-201ENST00000445336 RABGAP1Q9Y3P9 1069 aa8.4□□□□□ -1.06
BRAFP1-201ENST00000445336 SPEF2Q9C093 1822 aa8.4□□□□□ -1.07
BRAFP1-201ENST00000445336 ATAD5Q96QE3 1844 aa8.39□□□□□ -1.07
BRAFP1-201ENST00000445336 PHF20L1A8MW92 1017 aa8.39□□□□□ -1.07
BRAFP1-201ENST00000445336 PARNO95453 639 aaKnown RBP8.39□□□□□ -1.07
BRAFP1-201ENST00000445336 PLA2G2AP14555 144 aa8.39□□□□□ -1.07
BRAFP1-201ENST00000445336 CNGA1P29973 690 aa8.39□□□□□ -1.07
BRAFP1-201ENST00000445336 ERVK-9P63128 1117 aa8.39□□□□□ -1.07
BRAFP1-201ENST00000445336 ERVK-24P63145 666 aa8.39□□□□□ -1.07
BRAFP1-201ENST00000445336 BANK1Q8NDB2 785 aa8.39□□□□□ -1.07
BRAFP1-201ENST00000445336 TRIM75PA6NK02 468 aa8.39□□□□□ -1.07
BRAFP1-201ENST00000445336 CRKP46108 304 aa8.39□□□□□ -1.07
BRAFP1-201ENST00000445336 ACLYP53396 1101 aa8.39□□□□□ -1.07
BRAFP1-201ENST00000445336 VARS2Q5ST30 1063 aaKnown RBP8.39□□□□□ -1.07
BRAFP1-201ENST00000445336 COPS6Q7L5N1 327 aa8.39□□□□□ -1.07
BRAFP1-201ENST00000445336 CRIPAKQ8N1N5 446 aa8.39□□□□□ -1.07
BRAFP1-201ENST00000445336 MSL3Q8N5Y2 521 aaKnown RBP8.39□□□□□ -1.07
BRAFP1-201ENST00000445336 MSLNLQ96KJ4 702 aa8.39□□□□□ -1.07
BRAFP1-201ENST00000445336 UPF3AQ9H1J1 476 aaKnown RBP8.39□□□□□ -1.07
BRAFP1-201ENST00000445336 XPNPEP3Q9NQH7 507 aa8.39□□□□□ -1.07
BRAFP1-201ENST00000445336 ZHX2Q9Y6X8 837 aa8.39□□□□□ -1.07
BRAFP1-201ENST00000445336 IRS4O14654 1257 aaPredicted RBP8.38□□□□□ -1.07
BRAFP1-201ENST00000445336 PDE8AO60658 829 aa8.38□□□□□ -1.07
BRAFP1-201ENST00000445336 ADAMTS4O75173 837 aa8.38□□□□□ -1.07
BRAFP1-201ENST00000445336 LTBRP36941 435 aa8.38□□□□□ -1.07
BRAFP1-201ENST00000445336 SHCBP1Q8NEM2 672 aa8.38□□□□□ -1.07
BRAFP1-201ENST00000445336 GDPD5Q8WTR4 605 aa8.38□□□□□ -1.07
BRAFP1-201ENST00000445336 OSBPL5Q9H0X9 879 aaPredicted RBP8.38□□□□□ -1.07
BRAFP1-201ENST00000445336 CLSPNQ9HAW4 1339 aa8.38□□□□□ -1.07
BRAFP1-201ENST00000445336 TBC1D12O60347 775 aa8.38□□□□□ -1.07
BRAFP1-201ENST00000445336 KINO60870 393 aaKnown RBP8.38□□□□□ -1.07
BRAFP1-201ENST00000445336 RBM25P49756 843 aaKnown RBP8.38□□□□□ -1.07
BRAFP1-201ENST00000445336 RBM5P52756 815 aaKnown RBP eCLIP8.38□□□□□ -1.07
BRAFP1-201ENST00000445336 CDAN1Q8IWY9 1227 aa8.38□□□□□ -1.07
BRAFP1-201ENST00000445336 HINFPQ9BQA5 517 aa8.38□□□□□ -1.07
BRAFP1-201ENST00000445336 NOC4LQ9BVI4 516 aaKnown RBP8.38□□□□□ -1.07
BRAFP1-201ENST00000445336 SCUBE2Q9NQ36 999 aa8.38□□□□□ -1.07
BRAFP1-201ENST00000445336 FLRT1Q9NZU1 646 aa8.38□□□□□ -1.07
BRAFP1-201ENST00000445336 NCDNQ9UBB6 729 aa8.38□□□□□ -1.07
BRAFP1-201ENST00000445336 SORCS3Q9UPU3 1222 aa8.38□□□□□ -1.07
BRAFP1-201ENST00000445336 BRCA2P51587 3418 aa8.38□□□□□ -1.07
BRAFP1-201ENST00000445336 MTMR3Q13615 1198 aa8.38□□□□□ -1.07
BRAFP1-201ENST00000445336 SP7Q8TDD2 431 aaPredicted RBP8.38□□□□□ -1.07
BRAFP1-201ENST00000445336 ZNF76P36508 570 aa8.37□□□□□ -1.07
BRAFP1-201ENST00000445336 TAF7Q15545 349 aaPredicted RBP8.37□□□□□ -1.07
BRAFP1-201ENST00000445336 FBXO22Q8NEZ5 403 aa8.37□□□□□ -1.07
BRAFP1-201ENST00000445336 TBC1D22AQ8WUA7 517 aa8.37□□□□□ -1.07
BRAFP1-201ENST00000445336 GATA6Q92908 595 aa8.37□□□□□ -1.07
BRAFP1-201ENST00000445336 GLT1D1Q96MS3 346 aa8.37□□□□□ -1.07
BRAFP1-201ENST00000445336 UBL7Q96S82 380 aaPredicted RBP8.37□□□□□ -1.07
BRAFP1-201ENST00000445336 AS3MTQ9HBK9 375 aa8.37□□□□□ -1.07
BRAFP1-201ENST00000445336 MBIPQ9NS73 344 aa8.37□□□□□ -1.07
BRAFP1-201ENST00000445336 DBF4Q9UBU7 674 aaPredicted RBP8.37□□□□□ -1.07
BRAFP1-201ENST00000445336 DIS3Q9Y2L1 958 aaKnown RBP8.37□□□□□ -1.07
BRAFP1-201ENST00000445336 ATG2AQ2TAZ0 1938 aa8.37□□□□□ -1.07
BRAFP1-201ENST00000445336 H3BQ06 376 aaPredicted RBP8.37□□□□□ -1.07
BRAFP1-201ENST00000445336 APBB1O00213 710 aa8.37□□□□□ -1.07
BRAFP1-201ENST00000445336 CCAR1Q8IX12 1150 aaKnown RBP8.37□□□□□ -1.07
BRAFP1-201ENST00000445336 RAD9AQ99638 391 aa8.37□□□□□ -1.07
BRAFP1-201ENST00000445336 WDR18Q9BV38 432 aa8.37□□□□□ -1.07
BRAFP1-201ENST00000445336 HIPK3Q9H422 1215 aa8.37□□□□□ -1.07
BRAFP1-201ENST00000445336 RNF216Q9NWF9 866 aaPredicted RBP8.37□□□□□ -1.07
BRAFP1-201ENST00000445336 N4BP2L1Q5TBK1 243 aaPredicted RBP8.36□□□□□ -1.07
BRAFP1-201ENST00000445336 BABAM1Q9NWV8 329 aa8.36□□□□□ -1.07
BRAFP1-201ENST00000445336 DCDC2BA2VCK2 349 aa8.36□□□□□ -1.07
BRAFP1-201ENST00000445336 C19orf81C9J6K1 198 aa8.36□□□□□ -1.07
BRAFP1-201ENST00000445336 H3BNC9 293 aa8.36□□□□□ -1.07
BRAFP1-201ENST00000445336 IRX3P78415 501 aaPredicted RBP8.36□□□□□ -1.07
BRAFP1-201ENST00000445336 MKRN4PQ13434 485 aaPredicted RBP8.36□□□□□ -1.07
BRAFP1-201ENST00000445336 SIL1Q9H173 461 aa8.36□□□□□ -1.07
BRAFP1-201ENST00000445336 EPC1Q9H2F5 836 aa8.36□□□□□ -1.07
BRAFP1-201ENST00000445336 PCDHGA2Q9Y5H1 932 aa8.36□□□□□ -1.07
BRAFP1-201ENST00000445336 PCDHAC2Q9Y5I4 1007 aa8.36□□□□□ -1.07
BRAFP1-201ENST00000445336 GRIN2DO15399 1336 aa8.36□□□□□ -1.07
BRAFP1-201ENST00000445336 HERVK_113P62684 666 aa8.35□□□□□ -1.07
BRAFP1-201ENST00000445336 TREML2Q5T2D2 321 aa8.35□□□□□ -1.07
BRAFP1-201ENST00000445336 OTOP2Q7RTS6 562 aa8.35□□□□□ -1.07
BRAFP1-201ENST00000445336 FERMT2Q96AC1 680 aa8.35□□□□□ -1.07
BRAFP1-201ENST00000445336 FBXO4Q9UKT5 387 aa8.35□□□□□ -1.07
BRAFP1-201ENST00000445336 J3QKU1 62 aa8.35□□□□□ -1.07
BRAFP1-201ENST00000445336 ZBTB22O15209 634 aa8.35□□□□□ -1.07
BRAFP1-201ENST00000445336 RB1P06400 928 aa8.35□□□□□ -1.07
BRAFP1-201ENST00000445336 TGM1P22735 817 aa8.35□□□□□ -1.07
BRAFP1-201ENST00000445336 ADAM15Q13444 863 aa8.35□□□□□ -1.07
BRAFP1-201ENST00000445336 TCEAL5Q5H9L2 206 aa8.35□□□□□ -1.07
BRAFP1-201ENST00000445336 LARP1BQ659C4 914 aaKnown RBP8.35□□□□□ -1.07
BRAFP1-201ENST00000445336 CWF19L1Q69YN2 538 aaKnown RBP8.35□□□□□ -1.07
BRAFP1-201ENST00000445336 SMRP1Q8NCR6 262 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms