RNA–Protein interactions for RNA: ENST00000444878.5

RBM39-216, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-216ENST00000444878 TPM3P06753 285 aa15.69■□□□□ 0.1
RBM39-216ENST00000444878 GNAQP50148 359 aa15.69■□□□□ 0.1
RBM39-216ENST00000444878 NLRP5P59047 1200 aa15.69■□□□□ 0.1
RBM39-216ENST00000444878 DOK7Q18PE1 504 aa15.69■□□□□ 0.1
RBM39-216ENST00000444878 SPECC1Q5M775 1068 aa15.69■□□□□ 0.1
RBM39-216ENST00000444878 TTC12Q9H892 705 aaPredicted RBP15.69■□□□□ 0.1
RBM39-216ENST00000444878 FAM205CA6NFA0 338 aa15.68■□□□□ 0.1
RBM39-216ENST00000444878 BIN1O00499 593 aa15.68■□□□□ 0.1
RBM39-216ENST00000444878 ZNF75DP51815 510 aa15.68■□□□□ 0.1
RBM39-216ENST00000444878 NLRP12P59046 1061 aa15.68■□□□□ 0.1
RBM39-216ENST00000444878 GRM4Q14833 912 aa15.68■□□□□ 0.1
RBM39-216ENST00000444878 DPCR1Q3MIW9 517 aa15.68■□□□□ 0.1
RBM39-216ENST00000444878 EARS2Q5JPH6 523 aaKnown RBP15.68■□□□□ 0.1
RBM39-216ENST00000444878 PLA2G4DQ86XP0 818 aa15.68■□□□□ 0.1
RBM39-216ENST00000444878 DHX40Q8IX18 779 aaKnown RBP15.68■□□□□ 0.1
RBM39-216ENST00000444878 DRC7Q8IY82 874 aa15.68■□□□□ 0.1
RBM39-216ENST00000444878 CNNM3Q8NE01 707 aa15.68■□□□□ 0.1
RBM39-216ENST00000444878 TTF2Q9UNY4 1162 aaKnown RBP15.68■□□□□ 0.1
RBM39-216ENST00000444878 SRPRBQ9Y5M8 271 aaKnown RBP15.68■□□□□ 0.1
RBM39-216ENST00000444878 NPY5RQ15761 445 aa15.68■□□□□ 0.1
RBM39-216ENST00000444878 STAG2Q8N3U4 1231 aa15.68■□□□□ 0.1
RBM39-216ENST00000444878 ZNF579Q8NAF0 562 aaKnown RBP15.68■□□□□ 0.1
RBM39-216ENST00000444878 TMEM47Q9BQJ4 181 aa15.68■□□□□ 0.1
RBM39-216ENST00000444878 MTMR7Q9Y216 660 aa15.68■□□□□ 0.1
RBM39-216ENST00000444878 QSER1Q2KHR3 1735 aa15.68■□□□□ 0.1
RBM39-216ENST00000444878 GRIN1Q05586 938 aa15.67■□□□□ 0.1
RBM39-216ENST00000444878 LONRF3Q496Y0 759 aa15.67■□□□□ 0.1
RBM39-216ENST00000444878 SARM1Q6SZW1 724 aa15.67■□□□□ 0.1
RBM39-216ENST00000444878 KRBA2Q6ZNG9 492 aa15.67■□□□□ 0.1
RBM39-216ENST00000444878 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.67■□□□□ 0.1
RBM39-216ENST00000444878 CERS5Q8N5B7 392 aa15.67■□□□□ 0.1
RBM39-216ENST00000444878 AOPEPQ8N6M6 819 aa15.67■□□□□ 0.1
RBM39-216ENST00000444878 NEDD1Q8NHV4 660 aa15.67■□□□□ 0.1
RBM39-216ENST00000444878 MAD2L2Q9UI95 211 aa15.67■□□□□ 0.1
RBM39-216ENST00000444878 RGPD3A6NKT7 1758 aaPredicted RBP15.67■□□□□ 0.1
RBM39-216ENST00000444878 RGPD4Q7Z3J3 1758 aa15.67■□□□□ 0.1
RBM39-216ENST00000444878 SNED1Q8TER0 1413 aa15.67■□□□□ 0.1
RBM39-216ENST00000444878 BMP15O95972 392 aa15.67■□□□□ 0.1
RBM39-216ENST00000444878 PICALMQ13492 652 aa15.67■□□□□ 0.1
RBM39-216ENST00000444878 C2CD5Q86YS7 1000 aa15.67■□□□□ 0.1
RBM39-216ENST00000444878 TNFRSF25Q93038 417 aa15.67■□□□□ 0.1
RBM39-216ENST00000444878 VEGFAP15692 232 aaPredicted RBP15.66■□□□□ 0.1
RBM39-216ENST00000444878 CALML3P27482 149 aa15.66■□□□□ 0.1
RBM39-216ENST00000444878 PNOCQ13519 176 aa15.66■□□□□ 0.1
RBM39-216ENST00000444878 BPIFA3Q9BQP9 254 aa15.66■□□□□ 0.1
RBM39-216ENST00000444878 HOOK1Q9UJC3 728 aaKnown RBP15.66■□□□□ 0.1
RBM39-216ENST00000444878 TUBE1Q9UJT0 475 aa15.66■□□□□ 0.1
RBM39-216ENST00000444878 MORC2Q9Y6X9 1032 aaPredicted RBP15.66■□□□□ 0.1
RBM39-216ENST00000444878 H0YIN7 160 aa15.65■□□□□ 0.1
RBM39-216ENST00000444878 MXD3Q9BW11 206 aa15.65■□□□□ 0.1
RBM39-216ENST00000444878 SH3GLB2Q9NR46 395 aa15.65■□□□□ 0.1
RBM39-216ENST00000444878 SLX4Q8IY92 1834 aa15.65■□□□□ 0.1
RBM39-216ENST00000444878 POLR2DO15514 142 aaKnown RBP15.65■□□□□ 0.1
RBM39-216ENST00000444878 TTC38Q5R3I4 469 aa15.65■□□□□ 0.1
RBM39-216ENST00000444878 ISM2Q6H9L7 571 aa15.65■□□□□ 0.1
RBM39-216ENST00000444878 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.65■□□□□ 0.1
RBM39-216ENST00000444878 PIK3AP1Q6ZUJ8 805 aa15.65■□□□□ 0.1
RBM39-216ENST00000444878 METTL16Q86W50 562 aaKnown RBP15.65■□□□□ 0.1
RBM39-216ENST00000444878 LZTS2Q9BRK4 669 aa15.65■□□□□ 0.1
RBM39-216ENST00000444878 CSRNP2Q9H175 543 aa15.65■□□□□ 0.1
RBM39-216ENST00000444878 PALM3A6NDB9 673 aaPredicted RBP15.64■□□□□ 0.09
RBM39-216ENST00000444878 OFD1O75665 1012 aa15.64■□□□□ 0.09
RBM39-216ENST00000444878 SCNN1DP51172 638 aa15.64■□□□□ 0.09
RBM39-216ENST00000444878 ZNF174Q15697 407 aa15.64■□□□□ 0.09
RBM39-216ENST00000444878 NOM1Q5C9Z4 860 aaKnown RBP15.64■□□□□ 0.09
RBM39-216ENST00000444878 PODNQ7Z5L7 613 aa15.64■□□□□ 0.09
RBM39-216ENST00000444878 ELOA2Q8IYF1 753 aaPredicted RBP15.64■□□□□ 0.09
RBM39-216ENST00000444878 GPKOWQ92917 476 aaPredicted RBP eCLIP15.64■□□□□ 0.096e-7■■□□□ 12.1
RBM39-216ENST00000444878 CEP95Q96GE4 821 aa15.64■□□□□ 0.09
RBM39-216ENST00000444878 DBNDD1Q9H9R9 158 aa15.64■□□□□ 0.09
RBM39-216ENST00000444878 USP40Q9NVE5 1235 aa15.64■□□□□ 0.09
RBM39-216ENST00000444878 CLIP2Q9UDT6 1046 aa15.64■□□□□ 0.09
RBM39-216ENST00000444878 ADAMTSL1Q8N6G6 1762 aa15.64■□□□□ 0.09
RBM39-216ENST00000444878 CDC25BP30305 580 aa15.64■□□□□ 0.09
RBM39-216ENST00000444878 TRAPPC10P48553 1259 aa15.64■□□□□ 0.09
RBM39-216ENST00000444878 TEKT1Q969V4 418 aa15.64■□□□□ 0.09
RBM39-216ENST00000444878 FERMT2Q96AC1 680 aa15.64■□□□□ 0.09
RBM39-216ENST00000444878 NAP1L5Q96NT1 182 aaPredicted RBP15.64■□□□□ 0.09
RBM39-216ENST00000444878 WNT7AO00755 349 aa15.63■□□□□ 0.09
RBM39-216ENST00000444878 CYTH3O43739 400 aa15.63■□□□□ 0.09
RBM39-216ENST00000444878 GOLGA8HP0CJ92 632 aa15.63■□□□□ 0.09
RBM39-216ENST00000444878 TOP1P11387 765 aaKnown RBP15.63■□□□□ 0.09
RBM39-216ENST00000444878 PTGS1P23219 599 aa15.63■□□□□ 0.09
RBM39-216ENST00000444878 TPM4P67936 248 aa15.63■□□□□ 0.09
RBM39-216ENST00000444878 STYK1Q6J9G0 422 aa15.63■□□□□ 0.09
RBM39-216ENST00000444878 HHIPL2Q6UWX4 724 aa15.63■□□□□ 0.09
RBM39-216ENST00000444878 CCDC186Q7Z3E2 898 aa15.63■□□□□ 0.09
RBM39-216ENST00000444878 BLIDQ8IZY5 108 aa15.63■□□□□ 0.09
RBM39-216ENST00000444878 PDILTQ8N807 584 aa15.63■□□□□ 0.09
RBM39-216ENST00000444878 MRFAP1L1Q96HT8 127 aa15.63■□□□□ 0.09
RBM39-216ENST00000444878 PCDHA4Q9UN74 947 aa15.63■□□□□ 0.09
RBM39-216ENST00000444878 SMTNL1A8MU46 457 aa15.62■□□□□ 0.09
RBM39-216ENST00000444878 KLRF2D3W0D1 207 aa15.62■□□□□ 0.09
RBM39-216ENST00000444878 PARP1P09874 1014 aaKnown RBP15.62■□□□□ 0.09
RBM39-216ENST00000444878 USP49Q70CQ1 688 aa15.62■□□□□ 0.09
RBM39-216ENST00000444878 CCDC148Q8NFR7 591 aa15.62■□□□□ 0.09
RBM39-216ENST00000444878 KCNF1Q9H3M0 494 aa15.62■□□□□ 0.09
RBM39-216ENST00000444878 DDX4Q9NQI0 724 aaKnown RBP15.62■□□□□ 0.09
RBM39-216ENST00000444878 SERTAD1Q9UHV2 236 aa15.62■□□□□ 0.09
RBM39-216ENST00000444878 PCDHA5Q9Y5H7 936 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 283.9 ms