RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 GJA8P48165 433 aa13.04□□□□□ -0.32
SF3A1-203ENST00000444440 PDE1AP54750 535 aa13.04□□□□□ -0.32
SF3A1-203ENST00000444440 UBXN2AP68543 259 aa13.04□□□□□ -0.32
SF3A1-203ENST00000444440 CCL14Q16627 93 aa13.04□□□□□ -0.32
SF3A1-203ENST00000444440 MORN1Q5T089 497 aa13.04□□□□□ -0.32
SF3A1-203ENST00000444440 PRPF38BQ5VTL8 546 aaKnown RBP13.04□□□□□ -0.32
SF3A1-203ENST00000444440 LBX2Q6XYB7 198 aa13.04□□□□□ -0.32
SF3A1-203ENST00000444440 GPR142Q7Z601 462 aa13.04□□□□□ -0.32
SF3A1-203ENST00000444440 SPICE1Q8N0Z3 855 aa13.04□□□□□ -0.32
SF3A1-203ENST00000444440 GCC1Q96CN9 775 aa13.04□□□□□ -0.32
SF3A1-203ENST00000444440 FSD1Q9BTV5 496 aa13.04□□□□□ -0.32
SF3A1-203ENST00000444440 LNPKQ9C0E8 428 aa13.04□□□□□ -0.32
SF3A1-203ENST00000444440 STAP2Q9UGK3 403 aa13.04□□□□□ -0.32
SF3A1-203ENST00000444440 TMX2Q9Y320 296 aa13.04□□□□□ -0.32
SF3A1-203ENST00000444440 RABGAP1Q9Y3P9 1069 aa13.04□□□□□ -0.32
SF3A1-203ENST00000444440 LCTP09848 1927 aa13.03□□□□□ -0.32
SF3A1-203ENST00000444440 ZFYP08048 801 aaPredicted RBP13.03□□□□□ -0.32
SF3A1-203ENST00000444440 EEF2P13639 858 aaKnown RBP13.03□□□□□ -0.32
SF3A1-203ENST00000444440 GIMAP6Q6P9H5 292 aa13.03□□□□□ -0.32
SF3A1-203ENST00000444440 SMC5Q8IY18 1101 aa13.03□□□□□ -0.32
SF3A1-203ENST00000444440 IFNL3Q8IZI9 196 aa13.03□□□□□ -0.32
SF3A1-203ENST00000444440 U2AF1L4Q8WU68 220 aaKnown RBP13.03□□□□□ -0.32
SF3A1-203ENST00000444440 CCDC17Q96LX7 622 aa13.03□□□□□ -0.32
SF3A1-203ENST00000444440 VCPKMTQ9H867 229 aa13.03□□□□□ -0.32
SF3A1-203ENST00000444440 PAK6Q9NQU5 681 aaPredicted RBP13.03□□□□□ -0.32
SF3A1-203ENST00000444440 TACC3Q9Y6A5 838 aa13.03□□□□□ -0.32
SF3A1-203ENST00000444440 CEP290O15078 2479 aa13.03□□□□□ -0.32
SF3A1-203ENST00000444440 RANBP2P49792 3224 aaKnown RBP13.03□□□□□ -0.32
SF3A1-203ENST00000444440 PRDM1O75626 825 aa13.02□□□□□ -0.33
SF3A1-203ENST00000444440 VPS53Q5VIR6 699 aa13.02□□□□□ -0.33
SF3A1-203ENST00000444440 B4GALNT3Q6L9W6 998 aa13.02□□□□□ -0.33
SF3A1-203ENST00000444440 PLEKHH3Q7Z736 793 aa13.02□□□□□ -0.33
SF3A1-203ENST00000444440 AMOTL1Q8IY63 956 aa13.02□□□□□ -0.33
SF3A1-203ENST00000444440 GTF3C2Q8WUA4 911 aaPredicted RBP13.02□□□□□ -0.33
SF3A1-203ENST00000444440 DDRGK1Q96HY6 314 aa13.02□□□□□ -0.33
SF3A1-203ENST00000444440 DEFB118Q96PH6 123 aa13.02□□□□□ -0.33
SF3A1-203ENST00000444440 TANGO6Q9C0B7 1094 aa13.02□□□□□ -0.33
SF3A1-203ENST00000444440 FBXO28Q9NVF7 368 aa13.02□□□□□ -0.33
SF3A1-203ENST00000444440 FLRT1Q9NZU1 646 aa13.02□□□□□ -0.33
SF3A1-203ENST00000444440 SUPT16HQ9Y5B9 1047 aaKnown RBP13.02□□□□□ -0.33
SF3A1-203ENST00000444440 IGKV6D-41A0A0C4DH26 115 aa13.01□□□□□ -0.33
SF3A1-203ENST00000444440 PATL2C9JE40 543 aaKnown RBP13.01□□□□□ -0.33
SF3A1-203ENST00000444440 SGPL1O95470 568 aa13.01□□□□□ -0.33
SF3A1-203ENST00000444440 HMGCRP04035 888 aa13.01□□□□□ -0.33
SF3A1-203ENST00000444440 MAPK4P31152 587 aa13.01□□□□□ -0.33
SF3A1-203ENST00000444440 TDO2P48775 406 aa13.01□□□□□ -0.33
SF3A1-203ENST00000444440 ATP2B2Q01814 1243 aa13.01□□□□□ -0.33
SF3A1-203ENST00000444440 ATG4CQ96DT6 458 aa13.01□□□□□ -0.33
SF3A1-203ENST00000444440 FAM227BQ96M60 508 aa13.01□□□□□ -0.33
SF3A1-203ENST00000444440 NUDT12Q9BQG2 462 aa13.01□□□□□ -0.33
SF3A1-203ENST00000444440 CRISPLD2Q9H0B8 497 aa13.01□□□□□ -0.33
SF3A1-203ENST00000444440 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.01□□□□□ -0.33
SF3A1-203ENST00000444440 ARHGEF10LQ9HCE6 1279 aa13.01□□□□□ -0.33
SF3A1-203ENST00000444440 INCENPQ9NQS7 918 aa13.01□□□□□ -0.33
SF3A1-203ENST00000444440 SZT2Q5T011 3432 aa13.01□□□□□ -0.33
SF3A1-203ENST00000444440 A0A0D9SFI3 127 aa13□□□□□ -0.33
SF3A1-203ENST00000444440 APPP05067 770 aa13□□□□□ -0.33
SF3A1-203ENST00000444440 GNAT2P19087 354 aa13□□□□□ -0.33
SF3A1-203ENST00000444440 DSG3P32926 999 aa13□□□□□ -0.33
SF3A1-203ENST00000444440 MNX1P50219 401 aaPredicted RBP13□□□□□ -0.33
SF3A1-203ENST00000444440 IRX6P78412 446 aaPredicted RBP13□□□□□ -0.33
SF3A1-203ENST00000444440 AAMPQ13685 434 aa13□□□□□ -0.33
SF3A1-203ENST00000444440 COG2Q14746 738 aa13□□□□□ -0.33
SF3A1-203ENST00000444440 MAP3K21Q5TCX8 1036 aa13□□□□□ -0.33
SF3A1-203ENST00000444440 NPLOC4Q8TAT6 608 aa13□□□□□ -0.33
SF3A1-203ENST00000444440 DIS3LQ8TF46 1054 aaKnown RBP13□□□□□ -0.33
SF3A1-203ENST00000444440 LPAR1Q92633 364 aa13□□□□□ -0.33
SF3A1-203ENST00000444440 NUP88Q99567 741 aaPredicted RBP13□□□□□ -0.33
SF3A1-203ENST00000444440 MOV10L1Q9BXT6 1211 aaKnown RBP13□□□□□ -0.33
SF3A1-203ENST00000444440 MYH6P13533 1939 aa13□□□□□ -0.33
SF3A1-203ENST00000444440 PLIN4Q96Q06 1357 aa12.99□□□□□ -0.33
SF3A1-203ENST00000444440 WDR46O15213 610 aaKnown RBP12.99□□□□□ -0.33
SF3A1-203ENST00000444440 FLOT1O75955 427 aa12.99□□□□□ -0.33
SF3A1-203ENST00000444440 XRCC5P13010 732 aaKnown RBP12.99□□□□□ -0.33
SF3A1-203ENST00000444440 PRKAR2AP13861 404 aaKnown RBP12.99□□□□□ -0.33
SF3A1-203ENST00000444440 PTPREP23469 700 aa12.99□□□□□ -0.33
SF3A1-203ENST00000444440 NUCB1Q02818 461 aa12.99□□□□□ -0.33
SF3A1-203ENST00000444440 CACNB2Q08289 660 aaPredicted RBP12.99□□□□□ -0.33
SF3A1-203ENST00000444440 GRB14Q14449 540 aa12.99□□□□□ -0.33
SF3A1-203ENST00000444440 FAM47AQ5JRC9 791 aa12.99□□□□□ -0.33
SF3A1-203ENST00000444440 FAM83BQ5T0W9 1011 aa12.99□□□□□ -0.33
SF3A1-203ENST00000444440 WDR78Q5VTH9 848 aa12.99□□□□□ -0.33
SF3A1-203ENST00000444440 SAMD1Q6SPF0 538 aaPredicted RBP12.99□□□□□ -0.33
SF3A1-203ENST00000444440 PLEKHM2Q8IWE5 1019 aa12.99□□□□□ -0.33
SF3A1-203ENST00000444440 SOCS4Q8WXH5 440 aa12.99□□□□□ -0.33
SF3A1-203ENST00000444440 EVI5LQ96CN4 794 aa12.99□□□□□ -0.33
SF3A1-203ENST00000444440 KANSL2Q9H9L4 492 aa12.99□□□□□ -0.33
SF3A1-203ENST00000444440 MKNK2Q9HBH9 465 aa12.99□□□□□ -0.33
SF3A1-203ENST00000444440 RPTORQ8N122 1335 aa12.98□□□□□ -0.33
SF3A1-203ENST00000444440 LAMA3Q16787 3333 aa12.98□□□□□ -0.33
SF3A1-203ENST00000444440 FARP2O94887 1054 aaPredicted RBP12.98□□□□□ -0.33
SF3A1-203ENST00000444440 IGHA2P01877 340 aa12.98□□□□□ -0.33
SF3A1-203ENST00000444440 CCND3P30281 292 aaPredicted RBP12.98□□□□□ -0.33
SF3A1-203ENST00000444440 RGS2P41220 211 aa12.98□□□□□ -0.33
SF3A1-203ENST00000444440 CTDSPL2Q05D32 466 aa12.98□□□□□ -0.33
SF3A1-203ENST00000444440 PPARAQ07869 468 aa12.98□□□□□ -0.33
SF3A1-203ENST00000444440 MAP2K5Q13163 448 aa12.98□□□□□ -0.33
SF3A1-203ENST00000444440 TMEM132BQ14DG7 1078 aa12.98□□□□□ -0.33
SF3A1-203ENST00000444440 RASGRP2Q7LDG7 609 aa12.98□□□□□ -0.33
SF3A1-203ENST00000444440 ZNF589Q86UQ0 364 aaPredicted RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms