RNA–Protein interactions for RNA: ENST00000444272.1

SYNCRIP-203, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 3

Gene SYNCRIP, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-203ENST00000444272 LENG1Q96BZ8 264 aaPredicted RBP17.86■□□□□ 0.45
SYNCRIP-203ENST00000444272 PRRX2Q99811 253 aa17.86■□□□□ 0.45
SYNCRIP-203ENST00000444272 ZNF536O15090 1300 aa17.86■□□□□ 0.45
SYNCRIP-203ENST00000444272 PKD1L2Q7Z442 2459 aa17.86■□□□□ 0.45
SYNCRIP-203ENST00000444272 COBLO75128 1261 aa17.85■□□□□ 0.45
SYNCRIP-203ENST00000444272 PLXNA3P51805 1871 aa17.85■□□□□ 0.45
SYNCRIP-203ENST00000444272 CFAP47Q6ZTR5 3102 aa17.85■□□□□ 0.45
SYNCRIP-203ENST00000444272 TSEN34Q9BSV6 310 aaKnown RBP17.85■□□□□ 0.45
SYNCRIP-203ENST00000444272 EMILIN3Q9NT22 766 aa17.85■□□□□ 0.45
SYNCRIP-203ENST00000444272 IFT57Q9NWB7 429 aa17.85■□□□□ 0.45
SYNCRIP-203ENST00000444272 KIF16BQ96L93 1317 aa17.84■□□□□ 0.45
SYNCRIP-203ENST00000444272 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.84■□□□□ 0.45
SYNCRIP-203ENST00000444272 LPXNO60711 386 aa17.84■□□□□ 0.45
SYNCRIP-203ENST00000444272 ADAMTS4O75173 837 aa17.84■□□□□ 0.45
SYNCRIP-203ENST00000444272 ASNSP08243 561 aa17.84■□□□□ 0.45
SYNCRIP-203ENST00000444272 BTDP43251 543 aa17.84■□□□□ 0.45
SYNCRIP-203ENST00000444272 JAG1P78504 1218 aa17.84■□□□□ 0.45
SYNCRIP-203ENST00000444272 VPS13AQ96RL7 3174 aa17.84■□□□□ 0.45
SYNCRIP-203ENST00000444272 GRXCR2A6NFK2 248 aa17.83■□□□□ 0.44
SYNCRIP-203ENST00000444272 ARHGEF15O94989 841 aa17.83■□□□□ 0.44
SYNCRIP-203ENST00000444272 IFIT1P09914 478 aaKnown RBP17.83■□□□□ 0.44
SYNCRIP-203ENST00000444272 CDK7P50613 346 aa17.83■□□□□ 0.44
SYNCRIP-203ENST00000444272 GNAI1P63096 354 aa17.83■□□□□ 0.44
SYNCRIP-203ENST00000444272 TAP1Q03518 808 aa17.83■□□□□ 0.44
SYNCRIP-203ENST00000444272 FKBP5Q13451 457 aaPredicted RBP17.83■□□□□ 0.44
SYNCRIP-203ENST00000444272 KMT2EQ8IZD2 1858 aa17.82■□□□□ 0.44
SYNCRIP-203ENST00000444272 UMODL1Q5DID0 1318 aa17.82■□□□□ 0.44
SYNCRIP-203ENST00000444272 TECTAO75443 2155 aa17.82■□□□□ 0.44
SYNCRIP-203ENST00000444272 MOXD2PA6NHM9 499 aa17.82■□□□□ 0.44
SYNCRIP-203ENST00000444272 USP17L15C9J2P7 530 aa17.82■□□□□ 0.44
SYNCRIP-203ENST00000444272 USP17L13C9JLJ4 530 aa17.82■□□□□ 0.44
SYNCRIP-203ENST00000444272 USP17L11C9JVI0 530 aa17.82■□□□□ 0.44
SYNCRIP-203ENST00000444272 USP17L18D6R9N7 530 aa17.82■□□□□ 0.44
SYNCRIP-203ENST00000444272 USP17L22D6RA61 530 aa17.82■□□□□ 0.44
SYNCRIP-203ENST00000444272 USP17L17D6RBQ6 530 aa17.82■□□□□ 0.44
SYNCRIP-203ENST00000444272 USP17L19D6RCP7 530 aa17.82■□□□□ 0.44
SYNCRIP-203ENST00000444272 USP17L20D6RJB6 530 aa17.82■□□□□ 0.44
SYNCRIP-203ENST00000444272 RGS20O76081 388 aa17.82■□□□□ 0.44
SYNCRIP-203ENST00000444272 USP17L24Q0WX57 530 aa17.82■□□□□ 0.44
SYNCRIP-203ENST00000444272 FLIIQ13045 1269 aa17.82■□□□□ 0.44
SYNCRIP-203ENST00000444272 SHROOM1Q2M3G4 852 aaPredicted RBP17.82■□□□□ 0.44
SYNCRIP-203ENST00000444272 USP17L2Q6R6M4 530 aa17.82■□□□□ 0.44
SYNCRIP-203ENST00000444272 ATOH1Q92858 354 aaPredicted RBP17.82■□□□□ 0.44
SYNCRIP-203ENST00000444272 COL4A6Q14031 1691 aa17.81■□□□□ 0.44
SYNCRIP-203ENST00000444272 MED19A0JLT2 244 aaPredicted RBP17.81■□□□□ 0.44
SYNCRIP-203ENST00000444272 SOWAHBA6NEL2 793 aa17.81■□□□□ 0.44
SYNCRIP-203ENST00000444272 TLR3O15455 904 aaKnown RBP17.81■□□□□ 0.44
SYNCRIP-203ENST00000444272 STRNO43815 780 aa17.81■□□□□ 0.44
SYNCRIP-203ENST00000444272 KCNA10Q16322 511 aa17.81■□□□□ 0.44
SYNCRIP-203ENST00000444272 FAM126BQ8IXS8 530 aa17.81■□□□□ 0.44
SYNCRIP-203ENST00000444272 MAML3Q96JK9 1138 aa17.81■□□□□ 0.44
SYNCRIP-203ENST00000444272 GLT1D1Q96MS3 346 aa17.81■□□□□ 0.44
SYNCRIP-203ENST00000444272 SLC5A4Q9NY91 659 aa17.81■□□□□ 0.44
SYNCRIP-203ENST00000444272 CACNA1HO95180 2353 aa17.81■□□□□ 0.44
SYNCRIP-203ENST00000444272 RIF1Q5UIP0 2472 aaKnown RBP17.8■□□□□ 0.44
SYNCRIP-203ENST00000444272 ELP1O95163 1332 aa17.8■□□□□ 0.44
SYNCRIP-203ENST00000444272 SALL1Q9NSC2 1324 aa17.8■□□□□ 0.44
SYNCRIP-203ENST00000444272 SYNRGQ9UMZ2 1314 aa17.8■□□□□ 0.44
SYNCRIP-203ENST00000444272 SIPA1L1O43166 1804 aa17.8■□□□□ 0.44
SYNCRIP-203ENST00000444272 FGFR2P21802 821 aa17.8■□□□□ 0.44
SYNCRIP-203ENST00000444272 CCL23P55773 120 aa17.8■□□□□ 0.44
SYNCRIP-203ENST00000444272 ZP2Q05996 745 aa17.8■□□□□ 0.44
SYNCRIP-203ENST00000444272 PUM3Q15397 648 aaKnown RBP17.8■□□□□ 0.44
SYNCRIP-203ENST00000444272 ZYXQ15942 572 aaKnown RBP17.8■□□□□ 0.44
SYNCRIP-203ENST00000444272 ASCL5Q7RTU5 278 aa17.8■□□□□ 0.44
SYNCRIP-203ENST00000444272 SPRED2Q7Z698 418 aa17.8■□□□□ 0.44
SYNCRIP-203ENST00000444272 VTI1AQ96AJ9 217 aa17.8■□□□□ 0.44
SYNCRIP-203ENST00000444272 HERC5Q9UII4 1024 aaKnown RBP17.8■□□□□ 0.44
SYNCRIP-203ENST00000444272 ROBO3Q96MS0 1386 aa17.79■□□□□ 0.44
SYNCRIP-203ENST00000444272 ARVCFO00192 962 aa17.79■□□□□ 0.44
SYNCRIP-203ENST00000444272 GRM8O00222 908 aa17.79■□□□□ 0.44
SYNCRIP-203ENST00000444272 TAL1P17542 331 aaPredicted RBP17.79■□□□□ 0.44
SYNCRIP-203ENST00000444272 LBX2Q6XYB7 198 aa17.79■□□□□ 0.44
SYNCRIP-203ENST00000444272 CATSPERGQ6ZRH7 1159 aa17.79■□□□□ 0.44
SYNCRIP-203ENST00000444272 DZIP1Q86YF9 867 aaKnown RBP17.79■□□□□ 0.44
SYNCRIP-203ENST00000444272 RUNDC1Q96C34 613 aa17.79■□□□□ 0.44
SYNCRIP-203ENST00000444272 MOV10L1Q9BXT6 1211 aaKnown RBP17.79■□□□□ 0.44
SYNCRIP-203ENST00000444272 HIPK3Q9H422 1215 aa17.79■□□□□ 0.44
SYNCRIP-203ENST00000444272 NRBP1Q9UHY1 535 aa17.79■□□□□ 0.44
SYNCRIP-203ENST00000444272 FAM186AA6NE01 2351 aa17.79■□□□□ 0.44
SYNCRIP-203ENST00000444272 DMXL1Q9Y485 3027 aa17.78■□□□□ 0.44
SYNCRIP-203ENST00000444272 CHD8Q9HCK8 2581 aa17.78■□□□□ 0.44
SYNCRIP-203ENST00000444272 SPDYE16A6NNV3 312 aaPredicted RBP17.78■□□□□ 0.44
SYNCRIP-203ENST00000444272 GDF11O95390 407 aa17.78■□□□□ 0.44
SYNCRIP-203ENST00000444272 AKR1A1P14550 325 aa17.78■□□□□ 0.44
SYNCRIP-203ENST00000444272 RHBDL3P58872 404 aa17.78■□□□□ 0.44
SYNCRIP-203ENST00000444272 KLHDC9Q8NEP7 349 aa17.78■□□□□ 0.44
SYNCRIP-203ENST00000444272 GDPD5Q8WTR4 605 aa17.78■□□□□ 0.44
SYNCRIP-203ENST00000444272 MUTYHQ9UIF7 546 aa17.78■□□□□ 0.44
SYNCRIP-203ENST00000444272 A0A0U1RQG5 324 aaPredicted RBP17.77■□□□□ 0.44
SYNCRIP-203ENST00000444272 MYADML2A6NDP7 307 aa17.77■□□□□ 0.44
SYNCRIP-203ENST00000444272 NPM3O75607 178 aaKnown RBP17.77■□□□□ 0.44
SYNCRIP-203ENST00000444272 IRS1P35568 1242 aa17.77■□□□□ 0.44
SYNCRIP-203ENST00000444272 PUS10Q3MIT2 529 aaKnown RBP17.77■□□□□ 0.44
SYNCRIP-203ENST00000444272 CCSAPQ6IQ19 270 aaPredicted RBP17.77■□□□□ 0.44
SYNCRIP-203ENST00000444272 BMP8AQ7Z5Y6 402 aa17.77■□□□□ 0.44
SYNCRIP-203ENST00000444272 SUGP1Q8IWZ8 645 aaKnown RBP17.77■□□□□ 0.44
SYNCRIP-203ENST00000444272 PBXIP1Q96AQ6 731 aa17.77■□□□□ 0.44
SYNCRIP-203ENST00000444272 CNTNAP3BQ96NU0 1288 aa17.77■□□□□ 0.44
SYNCRIP-203ENST00000444272 CNTNAP3Q9BZ76 1288 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms