RNA–Protein interactions for RNA: ENST00000444177.1

TREX1-202, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,200 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-202ENST00000444177 M0R2C6 588 aa16.78■□□□□ 0.28
TREX1-202ENST00000444177 NUCB1Q02818 461 aa16.78■□□□□ 0.28
TREX1-202ENST00000444177 C12orf60Q5U649 245 aa16.78■□□□□ 0.28
TREX1-202ENST00000444177 TMEM179Q6ZVK1 233 aa16.78■□□□□ 0.28
TREX1-202ENST00000444177 PLEKHH3Q7Z736 793 aa16.78■□□□□ 0.28
TREX1-202ENST00000444177 SOCS4Q8WXH5 440 aa16.78■□□□□ 0.28
TREX1-202ENST00000444177 USP6NLQ92738 828 aa16.78■□□□□ 0.28
TREX1-202ENST00000444177 STRBPQ96SI9 672 aaKnown RBP16.78■□□□□ 0.28
TREX1-202ENST00000444177 RPAP3Q9H6T3 665 aaPredicted RBP16.78■□□□□ 0.28
TREX1-202ENST00000444177 HMX1Q9NP08 348 aaPredicted RBP16.78■□□□□ 0.28
TREX1-202ENST00000444177 MYH8P13535 1937 aa16.78■□□□□ 0.28
TREX1-202ENST00000444177 SMIM22K7EJ46 135 aa16.77■□□□□ 0.28
TREX1-202ENST00000444177 CCNA1P78396 465 aa16.77■□□□□ 0.28
TREX1-202ENST00000444177 MORN1Q5T089 497 aa16.77■□□□□ 0.28
TREX1-202ENST00000444177 LBX2Q6XYB7 198 aa16.77■□□□□ 0.28
TREX1-202ENST00000444177 SIAH1Q8IUQ4 282 aa16.77■□□□□ 0.28
TREX1-202ENST00000444177 EVI5LQ96CN4 794 aa16.77■□□□□ 0.28
TREX1-202ENST00000444177 ARPP21Q9UBL0 812 aaPredicted RBP16.77■□□□□ 0.28
TREX1-202ENST00000444177 COLQQ9Y215 455 aaPredicted RBP16.77■□□□□ 0.28
TREX1-202ENST00000444177 AKR1B1P15121 316 aa16.76■□□□□ 0.27
TREX1-202ENST00000444177 RGS2P41220 211 aa16.76■□□□□ 0.27
TREX1-202ENST00000444177 CDK8P49336 464 aa16.76■□□□□ 0.27
TREX1-202ENST00000444177 MAP3K21Q5TCX8 1036 aa16.76■□□□□ 0.27
TREX1-202ENST00000444177 TRMT44Q8IYL2 757 aaKnown RBP16.76■□□□□ 0.27
TREX1-202ENST00000444177 CCDC17Q96LX7 622 aa16.76■□□□□ 0.27
TREX1-202ENST00000444177 SEC62Q99442 399 aaKnown RBP16.76■□□□□ 0.27
TREX1-202ENST00000444177 HOXC10Q9NYD6 342 aa16.76■□□□□ 0.27
TREX1-202ENST00000444177 BTBD7Q9P203 1132 aa16.76■□□□□ 0.27
TREX1-202ENST00000444177 PLXNB2O15031 1838 aa16.75■□□□□ 0.27
TREX1-202ENST00000444177 SPDYE16A6NNV3 312 aaPredicted RBP16.75■□□□□ 0.27
TREX1-202ENST00000444177 TRIM6-TRIM34B2RNG4 842 aa16.75■□□□□ 0.27
TREX1-202ENST00000444177 GNAT2P19087 354 aa16.75■□□□□ 0.27
TREX1-202ENST00000444177 TDO2P48775 406 aa16.75■□□□□ 0.27
TREX1-202ENST00000444177 COG2Q14746 738 aa16.75■□□□□ 0.27
TREX1-202ENST00000444177 KIAA1755Q5JYT7 1200 aa16.75■□□□□ 0.27
TREX1-202ENST00000444177 CTR9Q6PD62 1173 aa16.75■□□□□ 0.27
TREX1-202ENST00000444177 C16orf86Q6ZW13 317 aa16.75■□□□□ 0.27
TREX1-202ENST00000444177 PAWRQ96IZ0 340 aaKnown RBP16.75■□□□□ 0.27
TREX1-202ENST00000444177 CWC22Q9HCG8 908 aaKnown RBP16.75■□□□□ 0.27
TREX1-202ENST00000444177 NR2E3Q9Y5X4 410 aa16.75■□□□□ 0.27
TREX1-202ENST00000444177 GSG1L2A8MUP6 293 aa16.74■□□□□ 0.27
TREX1-202ENST00000444177 APPP05067 770 aa16.74■□□□□ 0.27
TREX1-202ENST00000444177 PRKAR2AP13861 404 aaKnown RBP16.74■□□□□ 0.27
TREX1-202ENST00000444177 ZKSCAN1P17029 563 aaPredicted RBP16.74■□□□□ 0.27
TREX1-202ENST00000444177 MAP2K5Q13163 448 aa16.74■□□□□ 0.27
TREX1-202ENST00000444177 CCL14Q16627 93 aa16.74■□□□□ 0.27
TREX1-202ENST00000444177 ZMYM1Q5SVZ6 1142 aa16.74■□□□□ 0.27
TREX1-202ENST00000444177 WDR78Q5VTH9 848 aa16.74■□□□□ 0.27
TREX1-202ENST00000444177 EPB41L4AQ9HCS5 686 aaPredicted RBP16.74■□□□□ 0.27
TREX1-202ENST00000444177 TMX2Q9Y320 296 aa16.74■□□□□ 0.27
TREX1-202ENST00000444177 SLC15A5A6NIM6 579 aa16.73■□□□□ 0.27
TREX1-202ENST00000444177 MINDY4BA8MYZ0 360 aa16.73■□□□□ 0.27
TREX1-202ENST00000444177 PTPREP23469 700 aa16.73■□□□□ 0.27
TREX1-202ENST00000444177 ICA1Q05084 483 aa16.73■□□□□ 0.27
TREX1-202ENST00000444177 CACNB2Q08289 660 aaPredicted RBP16.73■□□□□ 0.27
TREX1-202ENST00000444177 GIMAP6Q6P9H5 292 aa16.73■□□□□ 0.27
TREX1-202ENST00000444177 NECAB2Q7Z6G3 386 aa16.73■□□□□ 0.27
TREX1-202ENST00000444177 CLEC10AQ8IUN9 316 aa16.73■□□□□ 0.27
TREX1-202ENST00000444177 PLEKHM2Q8IWE5 1019 aa16.73■□□□□ 0.27
TREX1-202ENST00000444177 STK11IPQ8N1F8 1099 aa16.73■□□□□ 0.27
TREX1-202ENST00000444177 ANKLE1Q8NAG6 615 aa16.73■□□□□ 0.27
TREX1-202ENST00000444177 DIS3LQ8TF46 1054 aaKnown RBP16.73■□□□□ 0.27
TREX1-202ENST00000444177 RILPL2Q969X0 211 aa16.73■□□□□ 0.27
TREX1-202ENST00000444177 TANGO6Q9C0B7 1094 aa16.73■□□□□ 0.27
TREX1-202ENST00000444177 ARHGEF10LQ9HCE6 1279 aa16.73■□□□□ 0.27
TREX1-202ENST00000444177 CCDC129Q6ZRS4 1044 aa16.72■□□□□ 0.27
TREX1-202ENST00000444177 LPAR1Q92633 364 aa16.72■□□□□ 0.27
TREX1-202ENST00000444177 APBA2Q99767 749 aa16.72■□□□□ 0.27
TREX1-202ENST00000444177 NACAP1Q9BZK3 213 aa16.72■□□□□ 0.27
TREX1-202ENST00000444177 SH2D4AQ9H788 454 aa16.72■□□□□ 0.27
TREX1-202ENST00000444177 VCPKMTQ9H867 229 aa16.72■□□□□ 0.27
TREX1-202ENST00000444177 OGDHLQ9ULD0 1010 aa16.72■□□□□ 0.27
TREX1-202ENST00000444177 ROBO3Q96MS0 1386 aa16.72■□□□□ 0.27
TREX1-202ENST00000444177 RANBP2P49792 3224 aaKnown RBP16.72■□□□□ 0.27
TREX1-202ENST00000444177 EVI5O60447 810 aa16.71■□□□□ 0.27
TREX1-202ENST00000444177 DSG3P32926 999 aa16.71■□□□□ 0.27
TREX1-202ENST00000444177 MNX1P50219 401 aaPredicted RBP16.71■□□□□ 0.27
TREX1-202ENST00000444177 SBK1Q52WX2 424 aa16.71■□□□□ 0.27
TREX1-202ENST00000444177 CHRDL2Q6WN34 429 aa16.71■□□□□ 0.27
TREX1-202ENST00000444177 SPICE1Q8N0Z3 855 aa16.71■□□□□ 0.27
TREX1-202ENST00000444177 MOV10L1Q9BXT6 1211 aaKnown RBP16.71■□□□□ 0.27
TREX1-202ENST00000444177 NBPF3Q9H094 633 aa16.71■□□□□ 0.27
TREX1-202ENST00000444177 KANSL2Q9H9L4 492 aa16.71■□□□□ 0.27
TREX1-202ENST00000444177 IVNS1ABPQ9Y6Y0 642 aa16.71■□□□□ 0.27
TREX1-202ENST00000444177 PATL2C9JE40 543 aaKnown RBP16.7■□□□□ 0.26
TREX1-202ENST00000444177 EEF2P13639 858 aaKnown RBP16.7■□□□□ 0.26
TREX1-202ENST00000444177 CCND3P30281 292 aaPredicted RBP16.7■□□□□ 0.26
TREX1-202ENST00000444177 FXR1P51114 621 aaKnown RBP eCLIP16.7■□□□□ 0.26
TREX1-202ENST00000444177 ATP2B2Q01814 1243 aa16.7■□□□□ 0.26
TREX1-202ENST00000444177 GRB14Q14449 540 aa16.7■□□□□ 0.26
TREX1-202ENST00000444177 IFNL3Q8IZI9 196 aa16.7■□□□□ 0.26
TREX1-202ENST00000444177 SPATC1LQ9H0A9 340 aa16.7■□□□□ 0.26
TREX1-202ENST00000444177 NAPBQ9H115 298 aa16.7■□□□□ 0.26
TREX1-202ENST00000444177 OSBPL3Q9H4L5 887 aa16.7■□□□□ 0.26
TREX1-202ENST00000444177 FLRT1Q9NZU1 646 aa16.7■□□□□ 0.26
TREX1-202ENST00000444177 PCDH10Q9P2E7 1040 aa16.7■□□□□ 0.26
TREX1-202ENST00000444177 A0A0D9SFI3 127 aa16.69■□□□□ 0.26
TREX1-202ENST00000444177 FLOT1O75955 427 aa16.69■□□□□ 0.26
TREX1-202ENST00000444177 HOXC6P09630 235 aa16.69■□□□□ 0.26
TREX1-202ENST00000444177 MFSD14CQ5VZR4 134 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms