RNA–Protein interactions for RNA: ENST00000443839.1

SMPD4P1-203, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

TSL 1 (best) BASIC

Gene SMPD4P1, Length 2,108 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-203ENST00000443839 NCLP19338 710 aaKnown RBP11.02□□□□□ -0.64
SMPD4P1-203ENST00000443839 LMOD1P29536 600 aaPredicted RBP11.02□□□□□ -0.64
SMPD4P1-203ENST00000443839 NOVP48745 357 aa11.02□□□□□ -0.64
SMPD4P1-203ENST00000443839 GRM4Q14833 912 aa11.02□□□□□ -0.64
SMPD4P1-203ENST00000443839 TMEM179Q6ZVK1 233 aa11.02□□□□□ -0.64
SMPD4P1-203ENST00000443839 NBPF11Q86T75 865 aa11.02□□□□□ -0.64
SMPD4P1-203ENST00000443839 CDAN1Q8IWY9 1227 aa11.02□□□□□ -0.64
SMPD4P1-203ENST00000443839 LRRC47Q8N1G4 583 aaKnown RBP11.02□□□□□ -0.64
SMPD4P1-203ENST00000443839 FBXO18Q8NFZ0 1043 aa11.02□□□□□ -0.64
SMPD4P1-203ENST00000443839 AIFM3Q96NN9 605 aa11.02□□□□□ -0.64
SMPD4P1-203ENST00000443839 RNF26Q9BY78 433 aaPredicted RBP11.02□□□□□ -0.64
SMPD4P1-203ENST00000443839 ASTN2O75129 1339 aaPredicted RBP11.02□□□□□ -0.65
SMPD4P1-203ENST00000443839 MYH6P13533 1939 aa11.02□□□□□ -0.65
SMPD4P1-203ENST00000443839 UBE2Q2LH0YL09 131 aa11.02□□□□□ -0.65
SMPD4P1-203ENST00000443839 EPS15P42566 896 aa11.02□□□□□ -0.65
SMPD4P1-203ENST00000443839 GNAQP50148 359 aa11.02□□□□□ -0.65
SMPD4P1-203ENST00000443839 OTUD7BQ6GQQ9 843 aa11.02□□□□□ -0.65
SMPD4P1-203ENST00000443839 MIGA2Q7L4E1 593 aa11.02□□□□□ -0.65
SMPD4P1-203ENST00000443839 TRPM4Q8TD43 1214 aa11.02□□□□□ -0.65
SMPD4P1-203ENST00000443839 ZSCAN16Q9H4T2 348 aaPredicted RBP11.02□□□□□ -0.65
SMPD4P1-203ENST00000443839 KANSL2Q9H9L4 492 aa11.02□□□□□ -0.65
SMPD4P1-203ENST00000443839 CABP5Q9NP86 173 aa11.02□□□□□ -0.65
SMPD4P1-203ENST00000443839 GJB4Q9NTQ9 266 aa11.02□□□□□ -0.65
SMPD4P1-203ENST00000443839 TCHHQ07283 1943 aa11.01□□□□□ -0.65
SMPD4P1-203ENST00000443839 GREB1LQ9C091 1923 aaPredicted RBP11.01□□□□□ -0.65
SMPD4P1-203ENST00000443839 GH2P01242 217 aa11.01□□□□□ -0.65
SMPD4P1-203ENST00000443839 PARP1P09874 1014 aaKnown RBP11.01□□□□□ -0.65
SMPD4P1-203ENST00000443839 PTMSP20962 102 aa11.01□□□□□ -0.65
SMPD4P1-203ENST00000443839 GUCY1A2P33402 732 aa11.01□□□□□ -0.65
SMPD4P1-203ENST00000443839 ICA1Q05084 483 aa11.01□□□□□ -0.65
SMPD4P1-203ENST00000443839 FUT2Q10981 343 aa11.01□□□□□ -0.65
SMPD4P1-203ENST00000443839 MKRN4PQ13434 485 aaPredicted RBP11.01□□□□□ -0.65
SMPD4P1-203ENST00000443839 SEPT2Q15019 361 aa11.01□□□□□ -0.65
SMPD4P1-203ENST00000443839 SHROOM1Q2M3G4 852 aaPredicted RBP11.01□□□□□ -0.65
SMPD4P1-203ENST00000443839 SRBD1Q8N5C6 995 aaKnown RBP11.01□□□□□ -0.65
SMPD4P1-203ENST00000443839 DEFB129Q9H1M3 183 aa11.01□□□□□ -0.65
SMPD4P1-203ENST00000443839 V9GY48 417 aaPredicted RBP11.01□□□□□ -0.65
SMPD4P1-203ENST00000443839 CNTNAP5Q8WYK1 1306 aa11□□□□□ -0.65
SMPD4P1-203ENST00000443839 MYH4Q9Y623 1939 aa11□□□□□ -0.65
SMPD4P1-203ENST00000443839 TBC1D12O60347 775 aa11□□□□□ -0.65
SMPD4P1-203ENST00000443839 GRIN3BO60391 1043 aa11□□□□□ -0.65
SMPD4P1-203ENST00000443839 GOLGA8HP0CJ92 632 aa11□□□□□ -0.65
SMPD4P1-203ENST00000443839 DNM1Q05193 864 aaKnown RBP11□□□□□ -0.65
SMPD4P1-203ENST00000443839 RESTQ13127 1097 aa11□□□□□ -0.65
SMPD4P1-203ENST00000443839 ANGEL2Q5VTE6 544 aaKnown RBP11□□□□□ -0.65
SMPD4P1-203ENST00000443839 DPY19L2Q6NUT2 758 aa11□□□□□ -0.65
SMPD4P1-203ENST00000443839 APOBEC3FQ8IUX4 373 aaKnown RBP11□□□□□ -0.65
SMPD4P1-203ENST00000443839 STAG2Q8N3U4 1231 aa11□□□□□ -0.65
SMPD4P1-203ENST00000443839 MAD2L2Q9UI95 211 aa11□□□□□ -0.65
SMPD4P1-203ENST00000443839 hCG_1642624A0A1W2PR95 340 aa11□□□□□ -0.65
SMPD4P1-203ENST00000443839 KLRF2D3W0D1 207 aa11□□□□□ -0.65
SMPD4P1-203ENST00000443839 PRPF3O43395 683 aaKnown RBP11□□□□□ -0.65
SMPD4P1-203ENST00000443839 RAD21O60216 631 aa11□□□□□ -0.65
SMPD4P1-203ENST00000443839 PDHBP11177 359 aa11□□□□□ -0.65
SMPD4P1-203ENST00000443839 EEF2P13639 858 aaKnown RBP11□□□□□ -0.65
SMPD4P1-203ENST00000443839 XBP1P17861 261 aa11□□□□□ -0.65
SMPD4P1-203ENST00000443839 GNL2Q13823 731 aaKnown RBP11□□□□□ -0.65
SMPD4P1-203ENST00000443839 KRT40Q6A162 431 aa11□□□□□ -0.65
SMPD4P1-203ENST00000443839 FAM173BQ6P4H8 233 aa11□□□□□ -0.65
SMPD4P1-203ENST00000443839 USP17L2Q6R6M4 530 aa11□□□□□ -0.65
SMPD4P1-203ENST00000443839 RASGRP2Q7LDG7 609 aa11□□□□□ -0.65
SMPD4P1-203ENST00000443839 RGS22Q8NE09 1264 aa11□□□□□ -0.65
SMPD4P1-203ENST00000443839 PIBF1Q8WXW3 757 aa11□□□□□ -0.65
SMPD4P1-203ENST00000443839 LZTS2Q9BRK4 669 aa11□□□□□ -0.65
SMPD4P1-203ENST00000443839 GGA3Q9NZ52 723 aa11□□□□□ -0.65
SMPD4P1-203ENST00000443839 RBM27Q9P2N5 1060 aaKnown RBP11□□□□□ -0.65
SMPD4P1-203ENST00000443839 CNPY2Q9Y2B0 182 aa11□□□□□ -0.65
SMPD4P1-203ENST00000443839 PALM3A6NDB9 673 aaPredicted RBP10.99□□□□□ -0.65
SMPD4P1-203ENST00000443839 USP17L5A8MUK1 530 aa10.99□□□□□ -0.65
SMPD4P1-203ENST00000443839 FIBPO43427 364 aa10.99□□□□□ -0.65
SMPD4P1-203ENST00000443839 PRPF40AO75400 957 aaKnown RBP10.99□□□□□ -0.65
SMPD4P1-203ENST00000443839 KRT85P78386 507 aa10.99□□□□□ -0.65
SMPD4P1-203ENST00000443839 RRP1BQ14684 758 aaKnown RBP10.99□□□□□ -0.65
SMPD4P1-203ENST00000443839 TEPSINQ96N21 525 aa10.99□□□□□ -0.65
SMPD4P1-203ENST00000443839 GDPD2Q9HCC8 539 aa10.99□□□□□ -0.65
SMPD4P1-203ENST00000443839 NYAP2Q9P242 653 aa10.99□□□□□ -0.65
SMPD4P1-203ENST00000443839 PGAP2Q9UHJ9 254 aa10.99□□□□□ -0.65
SMPD4P1-203ENST00000443839 SAFBQ15424 915 aaKnown RBP eCLIP10.99□□□□□ -0.65
SMPD4P1-203ENST00000443839 ASPRV1Q53RT3 343 aa10.99□□□□□ -0.65
SMPD4P1-203ENST00000443839 ADARB2Q9NS39 739 aaKnown RBP10.99□□□□□ -0.65
SMPD4P1-203ENST00000443839 ISY1Q9ULR0 285 aaKnown RBP10.99□□□□□ -0.65
SMPD4P1-203ENST00000443839 FRMPD2Q68DX3 1309 aaPredicted RBP10.98□□□□□ -0.65
SMPD4P1-203ENST00000443839 HIRAP54198 1017 aaPredicted RBP10.98□□□□□ -0.65
SMPD4P1-203ENST00000443839 JAG1P78504 1218 aa10.98□□□□□ -0.65
SMPD4P1-203ENST00000443839 PKN1Q16512 942 aa10.98□□□□□ -0.65
SMPD4P1-203ENST00000443839 CSPP1Q1MSJ5 1256 aa10.98□□□□□ -0.65
SMPD4P1-203ENST00000443839 CCDC96Q2M329 555 aa10.98□□□□□ -0.65
SMPD4P1-203ENST00000443839 ZBTB21Q9ULJ3 1066 aa10.98□□□□□ -0.65
SMPD4P1-203ENST00000443839 TRAK2O60296 914 aa10.97□□□□□ -0.65
SMPD4P1-203ENST00000443839 SNHG28P0DPA3 235 aa10.97□□□□□ -0.65
SMPD4P1-203ENST00000443839 SCG2P13521 617 aa10.97□□□□□ -0.65
SMPD4P1-203ENST00000443839 CAP2P40123 477 aa10.97□□□□□ -0.65
SMPD4P1-203ENST00000443839 KIF23Q02241 960 aaPredicted RBP10.97□□□□□ -0.65
SMPD4P1-203ENST00000443839 BRAPQ7Z569 592 aa10.97□□□□□ -0.65
SMPD4P1-203ENST00000443839 MKL1Q969V6 931 aa10.97□□□□□ -0.65
SMPD4P1-203ENST00000443839 HOOK2Q96ED9 719 aa10.97□□□□□ -0.65
SMPD4P1-203ENST00000443839 SPZ1Q9BXG8 430 aa10.97□□□□□ -0.65
SMPD4P1-203ENST00000443839 ARHGEF10LQ9HCE6 1279 aa10.97□□□□□ -0.65
SMPD4P1-203ENST00000443839 VPS54Q9P1Q0 977 aa10.97□□□□□ -0.65
SMPD4P1-203ENST00000443839 KCNJ14Q9UNX9 436 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms