RNA–Protein interactions for RNA: ENST00000443621.1

LINC00393-201, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 282 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-201ENST00000443621 PDLIM2Q96JY6 352 aa3.25□□□□□ -1.89
LINC00393-201ENST00000443621 PPP1R9BQ96SB3 815 aa3.25□□□□□ -1.89
LINC00393-201ENST00000443621 FUCA2Q9BTY2 467 aa3.25□□□□□ -1.89
LINC00393-201ENST00000443621 GNL3Q9BVP2 549 aaKnown RBP eCLIP3.25□□□□□ -1.89
LINC00393-201ENST00000443621 NAT10Q9H0A0 1025 aaKnown RBP3.25□□□□□ -1.89
LINC00393-201ENST00000443621 NUP62CLQ9H1M0 184 aa3.25□□□□□ -1.89
LINC00393-201ENST00000443621 TAOK3Q9H2K8 898 aa3.25□□□□□ -1.89
LINC00393-201ENST00000443621 CUEDC2Q9H467 287 aa3.25□□□□□ -1.89
LINC00393-201ENST00000443621 GRPEL1Q9HAV7 217 aa3.25□□□□□ -1.89
LINC00393-201ENST00000443621 TOMM22Q9NS69 142 aa3.25□□□□□ -1.89
LINC00393-201ENST00000443621 USP40Q9NVE5 1235 aa3.25□□□□□ -1.89
LINC00393-201ENST00000443621 BARHL2Q9NY43 387 aa3.25□□□□□ -1.89
LINC00393-201ENST00000443621 TMOD2Q9NZR1 351 aa3.25□□□□□ -1.89
LINC00393-201ENST00000443621 MAD2L2Q9UI95 211 aa3.25□□□□□ -1.89
LINC00393-201ENST00000443621 HPSEQ9Y251 543 aa3.25□□□□□ -1.89
LINC00393-201ENST00000443621 RABGAP1Q9Y3P9 1069 aa3.25□□□□□ -1.89
LINC00393-201ENST00000443621 SRPRBQ9Y5M8 271 aaKnown RBP3.25□□□□□ -1.89
LINC00393-201ENST00000443621 SCN9AQ15858 1988 aa3.25□□□□□ -1.89
LINC00393-201ENST00000443621 CNTNAP5Q8WYK1 1306 aa3.24□□□□□ -1.89
LINC00393-201ENST00000443621 PNMA6FA0A0J9YX94 578 aa3.24□□□□□ -1.89
LINC00393-201ENST00000443621 SPDYE2BA6NHP3 402 aa3.24□□□□□ -1.89
LINC00393-201ENST00000443621 WTIPA6NIX2 430 aaPredicted RBP3.24□□□□□ -1.89
LINC00393-201ENST00000443621 KLRF2D3W0D1 207 aa3.24□□□□□ -1.89
LINC00393-201ENST00000443621 FZD9O00144 591 aa3.24□□□□□ -1.89
LINC00393-201ENST00000443621 IKBKBO14920 756 aa3.24□□□□□ -1.89
LINC00393-201ENST00000443621 TBX3O15119 743 aa3.24□□□□□ -1.89
LINC00393-201ENST00000443621 KINO60870 393 aaKnown RBP3.24□□□□□ -1.89
LINC00393-201ENST00000443621 FOSP01100 380 aaPredicted RBP3.24□□□□□ -1.89
LINC00393-201ENST00000443621 ASNSP08243 561 aa3.24□□□□□ -1.89
LINC00393-201ENST00000443621 SPDYE6P0CI01 402 aa3.24□□□□□ -1.89
LINC00393-201ENST00000443621 PDHBP11177 359 aa3.24□□□□□ -1.89
LINC00393-201ENST00000443621 GCFC2P16383 781 aaKnown RBP3.24□□□□□ -1.89
LINC00393-201ENST00000443621 CDK11BP21127 795 aaKnown RBP3.24□□□□□ -1.89
LINC00393-201ENST00000443621 MUTP22033 750 aa3.24□□□□□ -1.89
LINC00393-201ENST00000443621 SHMT1P34896 483 aa3.24□□□□□ -1.89
LINC00393-201ENST00000443621 DEKP35659 375 aaKnown RBP3.24□□□□□ -1.89
LINC00393-201ENST00000443621 LONP1P36776 959 aaKnown RBP3.24□□□□□ -1.89
LINC00393-201ENST00000443621 ME1P48163 572 aa3.24□□□□□ -1.89
LINC00393-201ENST00000443621 USP11P51784 963 aa3.24□□□□□ -1.89
LINC00393-201ENST00000443621 MRPL12P52815 198 aaKnown RBP3.24□□□□□ -1.89
LINC00393-201ENST00000443621 ATP2C1P98194 919 aaPredicted RBP3.24□□□□□ -1.89
LINC00393-201ENST00000443621 GHRHRQ02643 423 aa3.24□□□□□ -1.89
LINC00393-201ENST00000443621 CCDC173Q0VFZ6 552 aa3.24□□□□□ -1.89
LINC00393-201ENST00000443621 AP3B2Q13367 1082 aa3.24□□□□□ -1.89
LINC00393-201ENST00000443621 SNW1Q13573 536 aaKnown RBP3.24□□□□□ -1.89
LINC00393-201ENST00000443621 GNL2Q13823 731 aaKnown RBP3.24□□□□□ -1.89
LINC00393-201ENST00000443621 COL9A3Q14050 684 aaPredicted RBP3.24□□□□□ -1.89
LINC00393-201ENST00000443621 PDIA5Q14554 519 aa3.24□□□□□ -1.89
LINC00393-201ENST00000443621 STK38Q15208 465 aa3.24□□□□□ -1.89
LINC00393-201ENST00000443621 PTPAQ15257 358 aa3.24□□□□□ -1.89
LINC00393-201ENST00000443621 DLGAP5Q15398 846 aa3.24□□□□□ -1.89
LINC00393-201ENST00000443621 SF3A1Q15459 793 aaKnown RBP3.24□□□□□ -1.89
LINC00393-201ENST00000443621 DIXDC1Q155Q3 683 aa3.24□□□□□ -1.89
LINC00393-201ENST00000443621 SPDYE2Q495Y8 402 aa3.24□□□□□ -1.89
LINC00393-201ENST00000443621 CERKLQ49MI3 558 aaPredicted RBP3.24□□□□□ -1.89
LINC00393-201ENST00000443621 RRP12Q5JTH9 1297 aaKnown RBP3.24□□□□□ -1.89
LINC00393-201ENST00000443621 AXDND1Q5T1B0 1012 aaPredicted RBP3.24□□□□□ -1.89
LINC00393-201ENST00000443621 RESP18Q5W5W9 173 aa3.24□□□□□ -1.89
LINC00393-201ENST00000443621 CIAPIN1Q6FI81 312 aa3.24□□□□□ -1.89
LINC00393-201ENST00000443621 SMYD5Q6GMV2 418 aa3.24□□□□□ -1.89
LINC00393-201ENST00000443621 PPP4R3AQ6IN85 833 aa3.24□□□□□ -1.89
LINC00393-201ENST00000443621 CAVIN1Q6NZI2 390 aaKnown RBP3.24□□□□□ -1.89
LINC00393-201ENST00000443621 SASS6Q6UVJ0 657 aa3.24□□□□□ -1.89
LINC00393-201ENST00000443621 NOL8Q76FK4 1167 aaKnown RBP3.24□□□□□ -1.89
LINC00393-201ENST00000443621 CHST3Q7LGC8 479 aa3.24□□□□□ -1.89
LINC00393-201ENST00000443621 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.24□□□□□ -1.89
LINC00393-201ENST00000443621 ILDR1Q86SU0 546 aaPredicted RBP3.24□□□□□ -1.89
LINC00393-201ENST00000443621 NIM1KQ8IY84 436 aa3.24□□□□□ -1.89
LINC00393-201ENST00000443621 DIS3L2Q8IYB7 885 aaKnown RBP3.24□□□□□ -1.89
LINC00393-201ENST00000443621 BLIDQ8IZY5 108 aa3.24□□□□□ -1.89
LINC00393-201ENST00000443621 FMR1NBQ8N0W7 255 aaPredicted RBP3.24□□□□□ -1.89
LINC00393-201ENST00000443621 KRI1Q8N9T8 703 aaKnown RBP3.24□□□□□ -1.89
LINC00393-201ENST00000443621 SPATA20Q8TB22 786 aa3.24□□□□□ -1.89
LINC00393-201ENST00000443621 FAM200AQ8TCP9 573 aa3.24□□□□□ -1.89
LINC00393-201ENST00000443621 LPAR1Q92633 364 aa3.24□□□□□ -1.89
LINC00393-201ENST00000443621 TNFRSF25Q93038 417 aa3.24□□□□□ -1.89
LINC00393-201ENST00000443621 RRP36Q96EU6 259 aaKnown RBP3.24□□□□□ -1.89
LINC00393-201ENST00000443621 TCEANC2Q96MN5 208 aa3.24□□□□□ -1.89
LINC00393-201ENST00000443621 USP28Q96RU2 1077 aa3.24□□□□□ -1.89
LINC00393-201ENST00000443621 TMEM47Q9BQJ4 181 aa3.24□□□□□ -1.89
LINC00393-201ENST00000443621 SLC26A6Q9BXS9 759 aa3.24□□□□□ -1.89
LINC00393-201ENST00000443621 LRRC2Q9BYS8 371 aa3.24□□□□□ -1.89
LINC00393-201ENST00000443621 CCSER1Q9C0I3 900 aa3.24□□□□□ -1.89
LINC00393-201ENST00000443621 LRRC27Q9C0I9 530 aa3.24□□□□□ -1.89
LINC00393-201ENST00000443621 TNMDQ9H2S6 317 aa3.24□□□□□ -1.89
LINC00393-201ENST00000443621 TSPY26PQ9H489 355 aa3.24□□□□□ -1.89
LINC00393-201ENST00000443621 CLSTN2Q9H4D0 955 aa3.24□□□□□ -1.89
LINC00393-201ENST00000443621 NCOA5Q9HCD5 579 aaKnown RBP3.24□□□□□ -1.89
LINC00393-201ENST00000443621 C6orf50Q9HD87 102 aa3.24□□□□□ -1.89
LINC00393-201ENST00000443621 CABP5Q9NP86 173 aa3.24□□□□□ -1.89
LINC00393-201ENST00000443621 ANO10Q9NW15 660 aa3.24□□□□□ -1.89
LINC00393-201ENST00000443621 FAM13BQ9NYF5 915 aa3.24□□□□□ -1.89
LINC00393-201ENST00000443621 TMEM63CQ9P1W3 806 aa3.24□□□□□ -1.89
LINC00393-201ENST00000443621 SEC63Q9UGP8 760 aaKnown RBP3.24□□□□□ -1.89
LINC00393-201ENST00000443621 DACH1Q9UI36 760 aa3.24□□□□□ -1.89
LINC00393-201ENST00000443621 TUBE1Q9UJT0 475 aa3.24□□□□□ -1.89
LINC00393-201ENST00000443621 PCDHA4Q9UN74 947 aa3.24□□□□□ -1.89
LINC00393-201ENST00000443621 STX8Q9UNK0 236 aa3.24□□□□□ -1.89
LINC00393-201ENST00000443621 CNPY2Q9Y2B0 182 aa3.24□□□□□ -1.89
LINC00393-201ENST00000443621 TACC3Q9Y6A5 838 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms