RNA–Protein interactions for RNA: ENST00000443561.3

PDLIM2-212, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-212ENST00000443561 CATSPERGQ6ZRH7 1159 aa15.23■□□□□ 0.03
PDLIM2-212ENST00000443561 ZNF444Q8N0Y2 327 aaPredicted RBP15.23■□□□□ 0.03
PDLIM2-212ENST00000443561 LRRC47Q8N1G4 583 aaKnown RBP15.23■□□□□ 0.03
PDLIM2-212ENST00000443561 MKL1Q969V6 931 aa15.23■□□□□ 0.03
PDLIM2-212ENST00000443561 PARK7Q99497 189 aaKnown RBP15.23■□□□□ 0.03
PDLIM2-212ENST00000443561 NUP88Q99567 741 aaPredicted RBP15.23■□□□□ 0.03
PDLIM2-212ENST00000443561 RPAP3Q9H6T3 665 aaPredicted RBP15.23■□□□□ 0.03
PDLIM2-212ENST00000443561 TMOD4Q9NZQ9 345 aa15.23■□□□□ 0.03
PDLIM2-212ENST00000443561 SPDYE16A6NNV3 312 aaPredicted RBP15.22■□□□□ 0.03
PDLIM2-212ENST00000443561 B4E1Z4 1266 aa15.22■□□□□ 0.03
PDLIM2-212ENST00000443561 ZNF213O14771 459 aa15.22■□□□□ 0.03
PDLIM2-212ENST00000443561 NDUFB10O96000 172 aa15.22■□□□□ 0.03
PDLIM2-212ENST00000443561 TSPY3P0CV98 308 aa15.22■□□□□ 0.03
PDLIM2-212ENST00000443561 TSPY8P0CW00 308 aa15.22■□□□□ 0.03
PDLIM2-212ENST00000443561 HERVK_113P62684 666 aa15.22■□□□□ 0.03
PDLIM2-212ENST00000443561 NECTIN1Q15223 517 aa15.22■□□□□ 0.03
PDLIM2-212ENST00000443561 RRP12Q5JTH9 1297 aaKnown RBP15.22■□□□□ 0.03
PDLIM2-212ENST00000443561 CYB5R4Q7L1T6 521 aa15.22■□□□□ 0.03
PDLIM2-212ENST00000443561 ARHGEF10LQ9HCE6 1279 aa15.22■□□□□ 0.03
PDLIM2-212ENST00000443561 FBXO28Q9NVF7 368 aa15.22■□□□□ 0.03
PDLIM2-212ENST00000443561 RBPJLQ9UBG7 517 aa15.22■□□□□ 0.03
PDLIM2-212ENST00000443561 CLIP2Q9UDT6 1046 aa15.22■□□□□ 0.03
PDLIM2-212ENST00000443561 TSPY2A6NKD2 308 aa15.21■□□□□ 0.03
PDLIM2-212ENST00000443561 RANBP6O60518 1105 aaKnown RBP15.21■□□□□ 0.03
PDLIM2-212ENST00000443561 SLC3A2P08195 630 aaKnown RBP15.21■□□□□ 0.03
PDLIM2-212ENST00000443561 USP14P54578 494 aa15.21■□□□□ 0.03
PDLIM2-212ENST00000443561 ANTXR2P58335 489 aa15.21■□□□□ 0.03
PDLIM2-212ENST00000443561 ATP2B2Q01814 1243 aa15.21■□□□□ 0.03
PDLIM2-212ENST00000443561 SP3Q02447 781 aa15.21■□□□□ 0.03
PDLIM2-212ENST00000443561 MFSD6Q6ZSS7 791 aa15.21■□□□□ 0.03
PDLIM2-212ENST00000443561 TNS4Q8IZW8 715 aa15.21■□□□□ 0.03
PDLIM2-212ENST00000443561 TCP11L1Q9NUJ3 509 aa15.21■□□□□ 0.03
PDLIM2-212ENST00000443561 MORF4L1Q9UBU8 362 aa15.21■□□□□ 0.03
PDLIM2-212ENST00000443561 U3KPZ7 1027 aaPredicted RBP15.21■□□□□ 0.03
PDLIM2-212ENST00000443561 USP17L15C9J2P7 530 aa15.2■□□□□ 0.02
PDLIM2-212ENST00000443561 USP17L13C9JLJ4 530 aa15.2■□□□□ 0.02
PDLIM2-212ENST00000443561 USP17L11C9JVI0 530 aa15.2■□□□□ 0.02
PDLIM2-212ENST00000443561 USP17L18D6R9N7 530 aa15.2■□□□□ 0.02
PDLIM2-212ENST00000443561 USP17L22D6RA61 530 aa15.2■□□□□ 0.02
PDLIM2-212ENST00000443561 USP17L17D6RBQ6 530 aa15.2■□□□□ 0.02
PDLIM2-212ENST00000443561 USP17L19D6RCP7 530 aa15.2■□□□□ 0.02
PDLIM2-212ENST00000443561 USP17L20D6RJB6 530 aa15.2■□□□□ 0.02
PDLIM2-212ENST00000443561 F5H6K3 240 aa15.2■□□□□ 0.02
PDLIM2-212ENST00000443561 SLC27A2O14975 620 aa15.2■□□□□ 0.02
PDLIM2-212ENST00000443561 KDM4AO75164 1064 aa15.2■□□□□ 0.02
PDLIM2-212ENST00000443561 ECM2O94769 699 aaPredicted RBP15.2■□□□□ 0.02
PDLIM2-212ENST00000443561 TTLL1O95922 423 aa15.2■□□□□ 0.02
PDLIM2-212ENST00000443561 LACTBP83111 547 aaPredicted RBP15.2■□□□□ 0.02
PDLIM2-212ENST00000443561 KLRC3Q07444 240 aa15.2■□□□□ 0.02
PDLIM2-212ENST00000443561 USP17L24Q0WX57 530 aa15.2■□□□□ 0.02
PDLIM2-212ENST00000443561 IMMTQ16891 758 aaKnown RBP15.2■□□□□ 0.02
PDLIM2-212ENST00000443561 Q3C1V9 767 aa15.2■□□□□ 0.02
PDLIM2-212ENST00000443561 FAM83BQ5T0W9 1011 aa15.2■□□□□ 0.02
PDLIM2-212ENST00000443561 LBX2Q6XYB7 198 aa15.2■□□□□ 0.02
PDLIM2-212ENST00000443561 OTOP1Q7RTM1 612 aa15.2■□□□□ 0.02
PDLIM2-212ENST00000443561 ANKRD13CQ8N6S4 541 aa15.2■□□□□ 0.02
PDLIM2-212ENST00000443561 TRIM47Q96LD4 638 aa15.2■□□□□ 0.02
PDLIM2-212ENST00000443561 ZKSCAN3Q9BRR0 538 aa15.2■□□□□ 0.02
PDLIM2-212ENST00000443561 ZNF287Q9HBT7 754 aa15.2■□□□□ 0.02
PDLIM2-212ENST00000443561 SENP2Q9HC62 589 aa15.2■□□□□ 0.02
PDLIM2-212ENST00000443561 BTBD7Q9P203 1132 aa15.2■□□□□ 0.02
PDLIM2-212ENST00000443561 CTNNA3Q9UI47 895 aa15.2■□□□□ 0.02
PDLIM2-212ENST00000443561 E7EWF7 191 aa15.19■□□□□ 0.02
PDLIM2-212ENST00000443561 WDR46O15213 610 aaKnown RBP15.19■□□□□ 0.02
PDLIM2-212ENST00000443561 PCP11498 1178 aaKnown RBP15.19■□□□□ 0.02
PDLIM2-212ENST00000443561 SEC23AQ15436 765 aa15.19■□□□□ 0.02
PDLIM2-212ENST00000443561 FAM110CQ1W6H9 321 aa15.19■□□□□ 0.02
PDLIM2-212ENST00000443561 CREB3L3Q68CJ9 461 aa15.19■□□□□ 0.02
PDLIM2-212ENST00000443561 MB21D2Q8IYB1 491 aaPredicted RBP15.19■□□□□ 0.02
PDLIM2-212ENST00000443561 RASEFQ8IZ41 740 aa15.19■□□□□ 0.02
PDLIM2-212ENST00000443561 GMCL1P1Q8NEA9 526 aa15.19■□□□□ 0.02
PDLIM2-212ENST00000443561 REPS2Q8NFH8 660 aa15.19■□□□□ 0.02
PDLIM2-212ENST00000443561 LPAR1Q92633 364 aa15.19■□□□□ 0.02
PDLIM2-212ENST00000443561 ATG4CQ96DT6 458 aa15.19■□□□□ 0.02
PDLIM2-212ENST00000443561 TMEM47Q9BQJ4 181 aa15.19■□□□□ 0.02
PDLIM2-212ENST00000443561 ANO2Q9NQ90 1003 aa15.19■□□□□ 0.02
PDLIM2-212ENST00000443561 TOMM22Q9NS69 142 aa15.19■□□□□ 0.02
PDLIM2-212ENST00000443561 ZSWIM5Q9P217 1185 aa15.19■□□□□ 0.02
PDLIM2-212ENST00000443561 ZNF236Q9UL36 1845 aa15.19■□□□□ 0.02
PDLIM2-212ENST00000443561 LCTP09848 1927 aa15.19■□□□□ 0.02
PDLIM2-212ENST00000443561 ZNFX1Q9P2E3 1918 aaKnown RBP15.18■□□□□ 0.02
PDLIM2-212ENST00000443561 DSG3P32926 999 aa15.18■□□□□ 0.02
PDLIM2-212ENST00000443561 IRX3P78415 501 aaPredicted RBP15.18■□□□□ 0.02
PDLIM2-212ENST00000443561 CTU1Q7Z7A3 348 aaKnown RBP15.18■□□□□ 0.02
PDLIM2-212ENST00000443561 ENAHQ8N8S7 591 aaPredicted RBP15.18■□□□□ 0.02
PDLIM2-212ENST00000443561 MCOLN1Q9GZU1 580 aa15.18■□□□□ 0.02
PDLIM2-212ENST00000443561 PORCNQ9H237 461 aa15.18■□□□□ 0.02
PDLIM2-212ENST00000443561 RNF41Q9H4P4 317 aaPredicted RBP15.18■□□□□ 0.02
PDLIM2-212ENST00000443561 PNMA3Q9UL41 463 aa15.18■□□□□ 0.02
PDLIM2-212ENST00000443561 SYNPO2Q9UMS6 1093 aa15.18■□□□□ 0.02
PDLIM2-212ENST00000443561 ADAMTS5Q9UNA0 930 aa15.18■□□□□ 0.02
PDLIM2-212ENST00000443561 OSBPP22059 807 aa15.17■□□□□ 0.02
PDLIM2-212ENST00000443561 PABPC4Q13310 644 aaKnown RBP eCLIP15.17■□□□□ 0.02
PDLIM2-212ENST00000443561 SMCR8Q8TEV9 937 aaPredicted RBP15.17■□□□□ 0.02
PDLIM2-212ENST00000443561 ESR2Q92731 530 aa15.17■□□□□ 0.02
PDLIM2-212ENST00000443561 KCNB2Q92953 911 aa15.17■□□□□ 0.02
PDLIM2-212ENST00000443561 CHMP4CQ96CF2 233 aa15.17■□□□□ 0.02
PDLIM2-212ENST00000443561 SH2D4AQ9H788 454 aa15.17■□□□□ 0.02
PDLIM2-212ENST00000443561 GPHNQ9NQX3 736 aaPredicted RBP15.17■□□□□ 0.02
PDLIM2-212ENST00000443561 STX8Q9UNK0 236 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms