RNA–Protein interactions for RNA: ENST00000442956.1

LINC00299-202, long intergenic non-protein coding RNA 299, humanhuman

TSL 2 BASIC

Gene LINC00299, Length 2,342 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00299-202ENST00000442956 ZNF70Q9UC06 446 aaPredicted RBP16.87■□□□□ 0.29
LINC00299-202ENST00000442956 ISY1Q9ULR0 285 aaKnown RBP16.87■□□□□ 0.29
LINC00299-202ENST00000442956 UTRNP46939 3433 aa16.87■□□□□ 0.29
LINC00299-202ENST00000442956 ATRNL1Q5VV63 1379 aa16.87■□□□□ 0.29
LINC00299-202ENST00000442956 TCP10L2B9ZVM9 353 aa16.87■□□□□ 0.29
LINC00299-202ENST00000442956 EIF6P56537 245 aaKnown RBP16.87■□□□□ 0.29
LINC00299-202ENST00000442956 CCDC183Q5T5S1 534 aa16.87■□□□□ 0.29
LINC00299-202ENST00000442956 LINC00301Q8NCQ3 95 aa16.87■□□□□ 0.29
LINC00299-202ENST00000442956 FOXP1Q9H334 677 aaPredicted RBP16.87■□□□□ 0.29
LINC00299-202ENST00000442956 FER1L6Q2WGJ9 1857 aa16.87■□□□□ 0.29
LINC00299-202ENST00000442956 TTLL1O95922 423 aa16.86■□□□□ 0.29
LINC00299-202ENST00000442956 GOLGA8HP0CJ92 632 aa16.86■□□□□ 0.29
LINC00299-202ENST00000442956 SCG2P13521 617 aa16.86■□□□□ 0.29
LINC00299-202ENST00000442956 LIG1P18858 919 aa16.86■□□□□ 0.29
LINC00299-202ENST00000442956 NASPP49321 788 aaPredicted RBP16.86■□□□□ 0.29
LINC00299-202ENST00000442956 TNIP1Q15025 636 aa16.86■□□□□ 0.29
LINC00299-202ENST00000442956 PFKFB3Q16875 520 aaPredicted RBP16.86■□□□□ 0.29
LINC00299-202ENST00000442956 LRRC47Q8N1G4 583 aaKnown RBP16.86■□□□□ 0.29
LINC00299-202ENST00000442956 BICD2Q8TD16 824 aa16.86■□□□□ 0.29
LINC00299-202ENST00000442956 CLIP2Q9UDT6 1046 aa16.86■□□□□ 0.29
LINC00299-202ENST00000442956 YEATS4O95619 227 aa16.86■□□□□ 0.29
LINC00299-202ENST00000442956 PARP1P09874 1014 aaKnown RBP16.86■□□□□ 0.29
LINC00299-202ENST00000442956 ME1P48163 572 aa16.86■□□□□ 0.29
LINC00299-202ENST00000442956 NR5A1Q13285 461 aa16.86■□□□□ 0.29
LINC00299-202ENST00000442956 STK38Q15208 465 aa16.86■□□□□ 0.29
LINC00299-202ENST00000442956 SLC35G1Q2M3R5 365 aa16.86■□□□□ 0.29
LINC00299-202ENST00000442956 SPDYE2Q495Y8 402 aa16.86■□□□□ 0.29
LINC00299-202ENST00000442956 ANO1Q5XXA6 986 aa16.86■□□□□ 0.29
LINC00299-202ENST00000442956 USP17L2Q6R6M4 530 aa16.86■□□□□ 0.29
LINC00299-202ENST00000442956 MTMR14Q8NCE2 650 aa16.86■□□□□ 0.29
LINC00299-202ENST00000442956 CSRNP1Q96S65 589 aa16.86■□□□□ 0.29
LINC00299-202ENST00000442956 LZTS2Q9BRK4 669 aa16.86■□□□□ 0.29
LINC00299-202ENST00000442956 PHF20Q9BVI0 1012 aa16.86■□□□□ 0.29
LINC00299-202ENST00000442956 KLRF2D3W0D1 207 aa16.85■□□□□ 0.29
LINC00299-202ENST00000442956 CERKLQ49MI3 558 aaPredicted RBP16.85■□□□□ 0.29
LINC00299-202ENST00000442956 METTL16Q86W50 562 aaKnown RBP16.85■□□□□ 0.29
LINC00299-202ENST00000442956 OXER1Q8TDS5 423 aa16.85■□□□□ 0.29
LINC00299-202ENST00000442956 SPON1Q9HCB6 807 aa16.85■□□□□ 0.29
LINC00299-202ENST00000442956 COL2A1P02458 1487 aaPredicted RBP16.85■□□□□ 0.29
LINC00299-202ENST00000442956 CYTH3O43739 400 aa16.85■□□□□ 0.29
LINC00299-202ENST00000442956 VEGFAP15692 232 aaPredicted RBP16.85■□□□□ 0.29
LINC00299-202ENST00000442956 L1TD1Q5T7N2 865 aaKnown RBP16.85■□□□□ 0.29
LINC00299-202ENST00000442956 TATDN1Q6P1N9 297 aa16.85■□□□□ 0.29
LINC00299-202ENST00000442956 KCNG4Q8TDN1 519 aa16.85■□□□□ 0.29
LINC00299-202ENST00000442956 SRCAPQ6ZRS2 3230 aa16.84■□□□□ 0.29
LINC00299-202ENST00000442956 USP17L5A8MUK1 530 aa16.84■□□□□ 0.29
LINC00299-202ENST00000442956 PRELPP51888 382 aa16.84■□□□□ 0.29
LINC00299-202ENST00000442956 SF3A1Q15459 793 aaKnown RBP16.84■□□□□ 0.29
LINC00299-202ENST00000442956 VEZTQ9HBM0 779 aa16.84■□□□□ 0.29
LINC00299-202ENST00000442956 SHTN1A0MZ66 631 aa16.84■□□□□ 0.29
LINC00299-202ENST00000442956 SPTLC2O15270 562 aa16.84■□□□□ 0.29
LINC00299-202ENST00000442956 PDHBP11177 359 aa16.84■□□□□ 0.29
LINC00299-202ENST00000442956 ATP2B2Q01814 1243 aa16.84■□□□□ 0.29
LINC00299-202ENST00000442956 SHROOM1Q2M3G4 852 aaPredicted RBP16.84■□□□□ 0.29
LINC00299-202ENST00000442956 LRSAM1Q6UWE0 723 aa16.84■□□□□ 0.29
LINC00299-202ENST00000442956 FAM151AQ8WW52 585 aa16.84■□□□□ 0.29
LINC00299-202ENST00000442956 MYH15Q9Y2K3 1946 aa16.83■□□□□ 0.29
LINC00299-202ENST00000442956 KRT2P35908 639 aa16.83■□□□□ 0.28
LINC00299-202ENST00000442956 FKBP1CQ5VVH2 108 aa16.83■□□□□ 0.28
LINC00299-202ENST00000442956 ZBED3Q96IU2 234 aaPredicted RBP16.83■□□□□ 0.28
LINC00299-202ENST00000442956 SPZ1Q9BXG8 430 aa16.83■□□□□ 0.28
LINC00299-202ENST00000442956 CPVLQ9H3G5 476 aa16.83■□□□□ 0.28
LINC00299-202ENST00000442956 MYOZ2Q9NPC6 264 aa16.83■□□□□ 0.28
LINC00299-202ENST00000442956 DACT1Q9NYF0 836 aa16.83■□□□□ 0.28
LINC00299-202ENST00000442956 PCDHA7Q9UN72 937 aa16.83■□□□□ 0.28
LINC00299-202ENST00000442956 BAZ2BQ9UIF8 2168 aaKnown RBP16.83■□□□□ 0.28
LINC00299-202ENST00000442956 WNT10BO00744 389 aa16.82■□□□□ 0.28
LINC00299-202ENST00000442956 MYO1BO43795 1136 aa16.82■□□□□ 0.28
LINC00299-202ENST00000442956 PPP4R3BQ5MIZ7 849 aa16.82■□□□□ 0.28
LINC00299-202ENST00000442956 GRPEL1Q9HAV7 217 aa16.82■□□□□ 0.28
LINC00299-202ENST00000442956 BRMS1Q9HCU9 246 aa16.82■□□□□ 0.28
LINC00299-202ENST00000442956 SIPA1L1O43166 1804 aa16.82■□□□□ 0.28
LINC00299-202ENST00000442956 CNTNAP1P78357 1384 aa16.82■□□□□ 0.28
LINC00299-202ENST00000442956 RPS12P25398 132 aaKnown RBP16.82■□□□□ 0.28
LINC00299-202ENST00000442956 MRE11P49959 708 aa16.82■□□□□ 0.28
LINC00299-202ENST00000442956 NLRP5P59047 1200 aa16.82■□□□□ 0.28
LINC00299-202ENST00000442956 SLC39A14Q15043 492 aa16.82■□□□□ 0.28
LINC00299-202ENST00000442956 NPY5RQ15761 445 aa16.82■□□□□ 0.28
LINC00299-202ENST00000442956 NBPF9Q3BBW0 867 aa16.82■□□□□ 0.28
LINC00299-202ENST00000442956 CCAR1Q8IX12 1150 aaKnown RBP16.82■□□□□ 0.28
LINC00299-202ENST00000442956 GPKOWQ92917 476 aaPredicted RBP eCLIP16.82■□□□□ 0.28
LINC00299-202ENST00000442956 NR1I2O75469 434 aa16.81■□□□□ 0.28
LINC00299-202ENST00000442956 GDF11O95390 407 aa16.81■□□□□ 0.28
LINC00299-202ENST00000442956 SNHG28P0DPA3 235 aa16.81■□□□□ 0.28
LINC00299-202ENST00000442956 TOB1P50616 345 aaPredicted RBP16.81■□□□□ 0.28
LINC00299-202ENST00000442956 RILPL1Q5EBL4 403 aa16.81■□□□□ 0.28
LINC00299-202ENST00000442956 KANSL2Q9H9L4 492 aa16.81■□□□□ 0.28
LINC00299-202ENST00000442956 CABP5Q9NP86 173 aa16.81■□□□□ 0.28
LINC00299-202ENST00000442956 HERC5Q9UII4 1024 aaKnown RBP16.81■□□□□ 0.28
LINC00299-202ENST00000442956 FRMPD2Q68DX3 1309 aaPredicted RBP16.81■□□□□ 0.28
LINC00299-202ENST00000442956 FZD9O00144 591 aa16.81■□□□□ 0.28
LINC00299-202ENST00000442956 LETM1O95202 739 aaPredicted RBP16.81■□□□□ 0.28
LINC00299-202ENST00000442956 ZNF280AP59817 542 aaPredicted RBP16.81■□□□□ 0.28
LINC00299-202ENST00000442956 ABCB5Q2M3G0 1257 aa16.81■□□□□ 0.28
LINC00299-202ENST00000442956 ASPRV1Q53RT3 343 aa16.81■□□□□ 0.28
LINC00299-202ENST00000442956 ADALQ6DHV7 355 aa16.81■□□□□ 0.28
LINC00299-202ENST00000442956 TMEM179Q6ZVK1 233 aa16.81■□□□□ 0.28
LINC00299-202ENST00000442956 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.81■□□□□ 0.28
LINC00299-202ENST00000442956 SH3GLB2Q9NR46 395 aa16.81■□□□□ 0.28
LINC00299-202ENST00000442956 GJA3Q9Y6H8 435 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms