RNA–Protein interactions for RNA: ENST00000442714.5

HDLBP-219, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-219ENST00000442714 UBE3CQ15386 1083 aa12.27□□□□□ -0.45
HDLBP-219ENST00000442714 LRRC26Q2I0M4 334 aa12.27□□□□□ -0.45
HDLBP-219ENST00000442714 LRIT3Q3SXY7 679 aa12.27□□□□□ -0.45
HDLBP-219ENST00000442714 C12orf60Q5U649 245 aa12.27□□□□□ -0.45
HDLBP-219ENST00000442714 GPR153Q6NV75 609 aa12.27□□□□□ -0.45
HDLBP-219ENST00000442714 TMEM179Q6ZVK1 233 aa12.27□□□□□ -0.45
HDLBP-219ENST00000442714 SLC44A5Q8NCS7 719 aa12.27□□□□□ -0.45
HDLBP-219ENST00000442714 TRPV1Q8NER1 839 aa12.27□□□□□ -0.45
HDLBP-219ENST00000442714 CWC22Q9HCG8 908 aaKnown RBP12.27□□□□□ -0.45
HDLBP-219ENST00000442714 PAG1Q9NWQ8 432 aa12.27□□□□□ -0.45
HDLBP-219ENST00000442714 TMX2Q9Y320 296 aa12.27□□□□□ -0.45
HDLBP-219ENST00000442714 LOC285556D6RIA3 1793 aa12.26□□□□□ -0.45
HDLBP-219ENST00000442714 SIPA1L1O43166 1804 aa12.26□□□□□ -0.45
HDLBP-219ENST00000442714 USP17L12C9JPN9 530 aa12.26□□□□□ -0.45
HDLBP-219ENST00000442714 USP17L21D6R901 530 aa12.26□□□□□ -0.45
HDLBP-219ENST00000442714 COBLO75128 1261 aa12.26□□□□□ -0.45
HDLBP-219ENST00000442714 CHGBP05060 677 aa12.26□□□□□ -0.45
HDLBP-219ENST00000442714 AKR1B1P15121 316 aa12.26□□□□□ -0.45
HDLBP-219ENST00000442714 CYP2C19P33261 490 aa12.26□□□□□ -0.45
HDLBP-219ENST00000442714 CDK8P49336 464 aa12.26□□□□□ -0.45
HDLBP-219ENST00000442714 WDR78Q5VTH9 848 aa12.26□□□□□ -0.45
HDLBP-219ENST00000442714 SHCBP1Q8NEM2 672 aa12.26□□□□□ -0.45
HDLBP-219ENST00000442714 LPAR1Q92633 364 aa12.26□□□□□ -0.45
HDLBP-219ENST00000442714 CCDC17Q96LX7 622 aa12.26□□□□□ -0.45
HDLBP-219ENST00000442714 SPATC1LQ9H0A9 340 aa12.26□□□□□ -0.45
HDLBP-219ENST00000442714 CHMP4BQ9H444 224 aaKnown RBP12.26□□□□□ -0.45
HDLBP-219ENST00000442714 DDX20Q9UHI6 824 aaKnown RBP12.26□□□□□ -0.45
HDLBP-219ENST00000442714 ADAMTS5Q9UNA0 930 aa12.26□□□□□ -0.45
HDLBP-219ENST00000442714 IVNS1ABPQ9Y6Y0 642 aa12.26□□□□□ -0.45
HDLBP-219ENST00000442714 MSCO60682 206 aa12.25□□□□□ -0.45
HDLBP-219ENST00000442714 MBD4O95243 580 aa12.25□□□□□ -0.45
HDLBP-219ENST00000442714 ERCC3P19447 782 aa12.25□□□□□ -0.45
HDLBP-219ENST00000442714 ADORA2AP29274 412 aa12.25□□□□□ -0.45
HDLBP-219ENST00000442714 OLFML2BQ68BL8 750 aa12.25□□□□□ -0.45
HDLBP-219ENST00000442714 CTR9Q6PD62 1173 aa12.25□□□□□ -0.45
HDLBP-219ENST00000442714 DPP9Q86TI2 863 aa12.25□□□□□ -0.45
HDLBP-219ENST00000442714 ABRAQ8N0Z2 381 aa12.25□□□□□ -0.45
HDLBP-219ENST00000442714 MB21D1Q8N884 522 aa12.25□□□□□ -0.45
HDLBP-219ENST00000442714 SENP6Q9GZR1 1112 aaPredicted RBP12.25□□□□□ -0.45
HDLBP-219ENST00000442714 BCL11AQ9H165 835 aa12.25□□□□□ -0.45
HDLBP-219ENST00000442714 MROH8Q9H579 483 aa12.25□□□□□ -0.45
HDLBP-219ENST00000442714 CYP2D7A0A087X1C5 515 aa12.24□□□□□ -0.45
HDLBP-219ENST00000442714 CNGA1P29973 690 aa12.24□□□□□ -0.45
HDLBP-219ENST00000442714 C16orf86Q6ZW13 317 aa12.24□□□□□ -0.45
HDLBP-219ENST00000442714 TDHQ8IZJ6 230 aa12.24□□□□□ -0.45
HDLBP-219ENST00000442714 SPICE1Q8N0Z3 855 aa12.24□□□□□ -0.45
HDLBP-219ENST00000442714 TANGO6Q9C0B7 1094 aa12.24□□□□□ -0.45
HDLBP-219ENST00000442714 UBE2OQ9C0C9 1292 aaKnown RBP12.24□□□□□ -0.45
HDLBP-219ENST00000442714 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.24□□□□□ -0.454e-7■□□□□ 9.9
HDLBP-219ENST00000442714 PUS7LQ9H0K6 701 aaKnown RBP12.24□□□□□ -0.45
HDLBP-219ENST00000442714 VCPKMTQ9H867 229 aa12.24□□□□□ -0.45
HDLBP-219ENST00000442714 KANSL2Q9H9L4 492 aa12.24□□□□□ -0.45
HDLBP-219ENST00000442714 RCAN3Q9UKA8 241 aa12.24□□□□□ -0.45
HDLBP-219ENST00000442714 CYBAP13498 195 aa12.23□□□□□ -0.45
HDLBP-219ENST00000442714 EEF2P13639 858 aaKnown RBP12.23□□□□□ -0.45
HDLBP-219ENST00000442714 TMEM132BQ14DG7 1078 aa12.23□□□□□ -0.45
HDLBP-219ENST00000442714 C20orf194Q5TEA3 1177 aa12.23□□□□□ -0.45
HDLBP-219ENST00000442714 ARRDC4Q8NCT1 418 aa12.23□□□□□ -0.45
HDLBP-219ENST00000442714 ATG4CQ96DT6 458 aa12.23□□□□□ -0.45
HDLBP-219ENST00000442714 STRBPQ96SI9 672 aaKnown RBP12.23□□□□□ -0.45
HDLBP-219ENST00000442714 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.23□□□□□ -0.45
HDLBP-219ENST00000442714 LRRCC1Q9C099 1032 aa12.23□□□□□ -0.45
HDLBP-219ENST00000442714 ARHGEF10LQ9HCE6 1279 aa12.23□□□□□ -0.45
HDLBP-219ENST00000442714 SLC4A4Q9Y6R1 1079 aa12.23□□□□□ -0.45
HDLBP-219ENST00000442714 PLXNB2O15031 1838 aa12.23□□□□□ -0.45
HDLBP-219ENST00000442714 DNM1LO00429 736 aa12.22□□□□□ -0.45
HDLBP-219ENST00000442714 SMARCA5O60264 1052 aaPredicted RBP12.22□□□□□ -0.45
HDLBP-219ENST00000442714 FLOT1O75955 427 aa12.22□□□□□ -0.45
HDLBP-219ENST00000442714 ICA1Q05084 483 aa12.22□□□□□ -0.45
HDLBP-219ENST00000442714 PRAMEF19Q5SWL8 479 aa12.22□□□□□ -0.45
HDLBP-219ENST00000442714 ZSCAN25Q6NSZ9 544 aa12.22□□□□□ -0.45
HDLBP-219ENST00000442714 CLEC10AQ8IUN9 316 aa12.22□□□□□ -0.45
HDLBP-219ENST00000442714 SLC17A8Q8NDX2 589 aa12.22□□□□□ -0.45
HDLBP-219ENST00000442714 DCTPP1Q9H773 170 aa12.22□□□□□ -0.45
HDLBP-219ENST00000442714 SLC5A4Q9NY91 659 aa12.22□□□□□ -0.45
HDLBP-219ENST00000442714 COL6A3P12111 3177 aa12.21□□□□□ -0.45
HDLBP-219ENST00000442714 DNAH12Q6ZR08 3092 aa12.21□□□□□ -0.45
HDLBP-219ENST00000442714 GSG1L2A8MUP6 293 aa12.21□□□□□ -0.45
HDLBP-219ENST00000442714 WDR46O15213 610 aaKnown RBP12.21□□□□□ -0.45
HDLBP-219ENST00000442714 SEPT4O43236 478 aa12.21□□□□□ -0.45
HDLBP-219ENST00000442714 SLC25A27O95847 323 aa12.21□□□□□ -0.45
HDLBP-219ENST00000442714 FCER1AP12319 257 aa12.21□□□□□ -0.45
HDLBP-219ENST00000442714 MDM2Q00987 491 aaPredicted RBP12.21□□□□□ -0.45
HDLBP-219ENST00000442714 PLS1Q14651 629 aa12.21□□□□□ -0.45
HDLBP-219ENST00000442714 SBK1Q52WX2 424 aa12.21□□□□□ -0.45
HDLBP-219ENST00000442714 GJC2Q5T442 439 aaPredicted RBP12.21□□□□□ -0.45
HDLBP-219ENST00000442714 SLC39A5Q6ZMH5 540 aa12.21□□□□□ -0.45
HDLBP-219ENST00000442714 NCAPG2Q86XI2 1143 aa12.21□□□□□ -0.45
HDLBP-219ENST00000442714 DEFB123Q8N688 67 aa12.21□□□□□ -0.45
HDLBP-219ENST00000442714 MAML3Q96JK9 1138 aa12.21□□□□□ -0.45
HDLBP-219ENST00000442714 SH2D4AQ9H788 454 aa12.21□□□□□ -0.45
HDLBP-219ENST00000442714 ECHDC1Q9NTX5 307 aa12.21□□□□□ -0.45
HDLBP-219ENST00000442714 MTMR10Q9NXD2 777 aa12.21□□□□□ -0.45
HDLBP-219ENST00000442714 POTEB2H3BUK9 544 aa12.2□□□□□ -0.46
HDLBP-219ENST00000442714 VWA5AO00534 786 aa12.2□□□□□ -0.46
HDLBP-219ENST00000442714 STAT3P40763 770 aa12.2□□□□□ -0.46
HDLBP-219ENST00000442714 ATN1P54259 1190 aaPredicted RBP12.2□□□□□ -0.46
HDLBP-219ENST00000442714 GIMAP6Q6P9H5 292 aa12.2□□□□□ -0.46
HDLBP-219ENST00000442714 Q7L0L9 218 aa12.2□□□□□ -0.46
HDLBP-219ENST00000442714 RIOX2Q8IUF8 465 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms