RNA–Protein interactions for RNA: ENST00000441135.1

SMPD4-210, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 699 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-210ENST00000441135 IFNL3Q8IZI9 196 aa21.73■■□□□ 1.07
SMPD4-210ENST00000441135 PAGR1Q9BTK6 254 aa21.73■■□□□ 1.07
SMPD4-210ENST00000441135 RPAP3Q9H6T3 665 aaPredicted RBP21.73■■□□□ 1.07
SMPD4-210ENST00000441135 ARHGEF10LQ9HCE6 1279 aa21.73■■□□□ 1.07
SMPD4-210ENST00000441135 GJD2Q9UKL4 321 aa21.73■■□□□ 1.07
SMPD4-210ENST00000441135 BRCA2P51587 3418 aa21.73■■□□□ 1.07
SMPD4-210ENST00000441135 A0A1W2PRG0 241 aa21.72■■□□□ 1.07
SMPD4-210ENST00000441135 SDSP20132 328 aa21.72■■□□□ 1.07
SMPD4-210ENST00000441135 TDO2P48775 406 aa21.72■■□□□ 1.07
SMPD4-210ENST00000441135 CCNA1P78396 465 aa21.72■■□□□ 1.07
SMPD4-210ENST00000441135 LBX2Q6XYB7 198 aa21.72■■□□□ 1.07
SMPD4-210ENST00000441135 LPAR1Q92633 364 aa21.72■■□□□ 1.07
SMPD4-210ENST00000441135 SHISA4Q96DD7 197 aa21.72■■□□□ 1.07
SMPD4-210ENST00000441135 UNC93B1Q9H1C4 597 aa21.72■■□□□ 1.07
SMPD4-210ENST00000441135 MYH8P13535 1937 aa21.72■■□□□ 1.07
SMPD4-210ENST00000441135 A0A0D9SFI3 127 aa21.71■■□□□ 1.07
SMPD4-210ENST00000441135 HMGCRP04035 888 aa21.71■■□□□ 1.07
SMPD4-210ENST00000441135 CAPN2P17655 700 aa21.71■■□□□ 1.07
SMPD4-210ENST00000441135 MFAP1P55081 439 aaKnown RBP21.71■■□□□ 1.07
SMPD4-210ENST00000441135 FAM227BQ96M60 508 aa21.71■■□□□ 1.07
SMPD4-210ENST00000441135 ZMYM6O95789 1325 aa21.71■■□□□ 1.07
SMPD4-210ENST00000441135 PEX10O60683 326 aa21.7■■□□□ 1.06
SMPD4-210ENST00000441135 APPP05067 770 aa21.7■■□□□ 1.06
SMPD4-210ENST00000441135 GSPT1P15170 499 aaKnown RBP21.7■■□□□ 1.06
SMPD4-210ENST00000441135 NMIQ13287 307 aaPredicted RBP21.7■■□□□ 1.06
SMPD4-210ENST00000441135 ALX1Q15699 326 aa21.7■■□□□ 1.06
SMPD4-210ENST00000441135 POTEEQ6S8J3 1075 aa21.7■■□□□ 1.06
SMPD4-210ENST00000441135 U2AF1L4Q8WU68 220 aaKnown RBP21.7■■□□□ 1.06
SMPD4-210ENST00000441135 NUDT12Q9BQG2 462 aa21.7■■□□□ 1.06
SMPD4-210ENST00000441135 ZNF287Q9HBT7 754 aa21.7■■□□□ 1.06
SMPD4-210ENST00000441135 TMX2Q9Y320 296 aa21.7■■□□□ 1.06
SMPD4-210ENST00000441135 MKI67P46013 3256 aaKnown RBP21.7■■□□□ 1.06
SMPD4-210ENST00000441135 SPDYE16A6NNV3 312 aaPredicted RBP21.69■■□□□ 1.06
SMPD4-210ENST00000441135 SMIM22K7EJ46 135 aa21.69■■□□□ 1.06
SMPD4-210ENST00000441135 FOXP2O15409 715 aa21.69■■□□□ 1.06
SMPD4-210ENST00000441135 XRCC5P13010 732 aaKnown RBP21.69■■□□□ 1.06
SMPD4-210ENST00000441135 Q3C1V9 767 aa21.69■■□□□ 1.06
SMPD4-210ENST00000441135 TANGO6Q9C0B7 1094 aa21.69■■□□□ 1.06
SMPD4-210ENST00000441135 NAPBQ9H115 298 aa21.69■■□□□ 1.06
SMPD4-210ENST00000441135 PORCNQ9H237 461 aa21.69■■□□□ 1.06
SMPD4-210ENST00000441135 KANSL2Q9H9L4 492 aa21.69■■□□□ 1.06
SMPD4-210ENST00000441135 CWC22Q9HCG8 908 aaKnown RBP21.69■■□□□ 1.06
SMPD4-210ENST00000441135 DIAPH3Q9NSV4 1193 aa21.69■■□□□ 1.06
SMPD4-210ENST00000441135 CCDC171Q6TFL3 1326 aa21.69■■□□□ 1.06
SMPD4-210ENST00000441135 CNMDO75829 334 aa21.68■■□□□ 1.06
SMPD4-210ENST00000441135 CCDC129Q6ZRS4 1044 aa21.68■■□□□ 1.06
SMPD4-210ENST00000441135 GPR142Q7Z601 462 aa21.68■■□□□ 1.06
SMPD4-210ENST00000441135 PLEKHH3Q7Z736 793 aa21.68■■□□□ 1.06
SMPD4-210ENST00000441135 CLEC10AQ8IUN9 316 aa21.68■■□□□ 1.06
SMPD4-210ENST00000441135 TRMT44Q8IYL2 757 aaKnown RBP21.68■■□□□ 1.06
SMPD4-210ENST00000441135 CCDC136Q96JN2 1154 aa21.68■■□□□ 1.06
SMPD4-210ENST00000441135 VCPKMTQ9H867 229 aa21.68■■□□□ 1.06
SMPD4-210ENST00000441135 PAK6Q9NQU5 681 aaPredicted RBP21.68■■□□□ 1.06
SMPD4-210ENST00000441135 HOXC10Q9NYD6 342 aa21.68■■□□□ 1.06
SMPD4-210ENST00000441135 SGPL1O95470 568 aa21.67■■□□□ 1.06
SMPD4-210ENST00000441135 COG2Q14746 738 aa21.67■■□□□ 1.06
SMPD4-210ENST00000441135 SIAH1Q8IUQ4 282 aa21.67■■□□□ 1.06
SMPD4-210ENST00000441135 RAD50Q92878 1312 aa21.66■■□□□ 1.06
SMPD4-210ENST00000441135 MINDY4BA8MYZ0 360 aa21.66■■□□□ 1.06
SMPD4-210ENST00000441135 SLC3A2P08195 630 aaKnown RBP21.66■■□□□ 1.06
SMPD4-210ENST00000441135 CYP2B6P20813 491 aa21.66■■□□□ 1.06
SMPD4-210ENST00000441135 RGS2P41220 211 aa21.66■■□□□ 1.06
SMPD4-210ENST00000441135 MORN1Q5T089 497 aa21.66■■□□□ 1.06
SMPD4-210ENST00000441135 ZNF589Q86UQ0 364 aaPredicted RBP21.66■■□□□ 1.06
SMPD4-210ENST00000441135 DEFB118Q96PH6 123 aa21.66■■□□□ 1.06
SMPD4-210ENST00000441135 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.66■■□□□ 1.06
SMPD4-210ENST00000441135 MKNK2Q9HBH9 465 aa21.66■■□□□ 1.06
SMPD4-210ENST00000441135 ANAPC4Q9UJX5 808 aa21.66■■□□□ 1.06
SMPD4-210ENST00000441135 GREB1LQ9C091 1923 aaPredicted RBP21.66■■□□□ 1.06
SMPD4-210ENST00000441135 DOCK3Q8IZD9 2030 aa21.65■■□□□ 1.06
SMPD4-210ENST00000441135 WDR46O15213 610 aaKnown RBP21.65■■□□□ 1.06
SMPD4-210ENST00000441135 HSPD1P10809 573 aaKnown RBP21.65■■□□□ 1.06
SMPD4-210ENST00000441135 EEF2P13639 858 aaKnown RBP21.65■■□□□ 1.06
SMPD4-210ENST00000441135 ZKSCAN1P17029 563 aaPredicted RBP21.65■■□□□ 1.06
SMPD4-210ENST00000441135 PPARAQ07869 468 aa21.65■■□□□ 1.06
SMPD4-210ENST00000441135 UBE2Q1Q7Z7E8 422 aa21.65■■□□□ 1.06
SMPD4-210ENST00000441135 MB21D1Q8N884 522 aa21.65■■□□□ 1.06
SMPD4-210ENST00000441135 TRIB2Q92519 343 aa21.65■■□□□ 1.06
SMPD4-210ENST00000441135 USP6NLQ92738 828 aa21.65■■□□□ 1.06
SMPD4-210ENST00000441135 APBA2Q99767 749 aa21.65■■□□□ 1.06
SMPD4-210ENST00000441135 BTBD7Q9P203 1132 aa21.65■■□□□ 1.06
SMPD4-210ENST00000441135 RPTORQ8N122 1335 aa21.64■■□□□ 1.05
SMPD4-210ENST00000441135 FARP2O94887 1054 aaPredicted RBP21.64■■□□□ 1.05
SMPD4-210ENST00000441135 RASA1P20936 1047 aa21.64■■□□□ 1.05
SMPD4-210ENST00000441135 ATP2B2Q01814 1243 aa21.64■■□□□ 1.05
SMPD4-210ENST00000441135 KIAA1755Q5JYT7 1200 aa21.64■■□□□ 1.05
SMPD4-210ENST00000441135 VPS53Q5VIR6 699 aa21.64■■□□□ 1.05
SMPD4-210ENST00000441135 SPICE1Q8N0Z3 855 aa21.64■■□□□ 1.05
SMPD4-210ENST00000441135 CRISPLD2Q9H0B8 497 aa21.64■■□□□ 1.05
SMPD4-210ENST00000441135 GOPCQ9HD26 462 aa21.64■■□□□ 1.05
SMPD4-210ENST00000441135 HMX1Q9NP08 348 aaPredicted RBP21.64■■□□□ 1.05
SMPD4-210ENST00000441135 IVNS1ABPQ9Y6Y0 642 aa21.64■■□□□ 1.05
SMPD4-210ENST00000441135 PLXNB2O15031 1838 aa21.64■■□□□ 1.05
SMPD4-210ENST00000441135 SLC15A5A6NIM6 579 aa21.63■■□□□ 1.05
SMPD4-210ENST00000441135 FLOT1O75955 427 aa21.63■■□□□ 1.05
SMPD4-210ENST00000441135 PDE4BQ07343 736 aa21.63■■□□□ 1.05
SMPD4-210ENST00000441135 MAP3K21Q5TCX8 1036 aa21.63■■□□□ 1.05
SMPD4-210ENST00000441135 WDR78Q5VTH9 848 aa21.63■■□□□ 1.05
SMPD4-210ENST00000441135 CWC27Q6UX04 472 aaKnown RBP21.63■■□□□ 1.05
SMPD4-210ENST00000441135 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms