RNA–Protein interactions for RNA: ENST00000440437.1

COL16A1-204, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-204ENST00000440437 CCAR1Q8IX12 1150 aaKnown RBP20.2■□□□□ 0.82
COL16A1-204ENST00000440437 OSBP2Q969R2 916 aa20.2■□□□□ 0.82
COL16A1-204ENST00000440437 APBA2Q99767 749 aa20.2■□□□□ 0.82
COL16A1-204ENST00000440437 ARPP21Q9UBL0 812 aaPredicted RBP20.2■□□□□ 0.82
COL16A1-204ENST00000440437 TMX2Q9Y320 296 aa20.2■□□□□ 0.82
COL16A1-204ENST00000440437 TTC41PQ6P2S7 1318 aa20.2■□□□□ 0.82
COL16A1-204ENST00000440437 ROBO3Q96MS0 1386 aa20.2■□□□□ 0.82
COL16A1-204ENST00000440437 CEP290O15078 2479 aa20.19■□□□□ 0.82
COL16A1-204ENST00000440437 TRMT44Q8IYL2 757 aaKnown RBP20.19■□□□□ 0.82
COL16A1-204ENST00000440437 PI4K2BQ8TCG2 481 aa20.19■□□□□ 0.82
COL16A1-204ENST00000440437 LPAR1Q92633 364 aa20.19■□□□□ 0.82
COL16A1-204ENST00000440437 ARHGEF10LQ9HCE6 1279 aa20.19■□□□□ 0.82
COL16A1-204ENST00000440437 MYH4Q9Y623 1939 aa20.19■□□□□ 0.82
COL16A1-204ENST00000440437 GSG1L2A8MUP6 293 aa20.18■□□□□ 0.82
COL16A1-204ENST00000440437 RNF113AO15541 343 aaKnown RBP20.18■□□□□ 0.82
COL16A1-204ENST00000440437 ZFYP08048 801 aaPredicted RBP20.18■□□□□ 0.82
COL16A1-204ENST00000440437 PRKAR2AP13861 404 aaKnown RBP20.18■□□□□ 0.82
COL16A1-204ENST00000440437 ZKSCAN1P17029 563 aaPredicted RBP20.18■□□□□ 0.82
COL16A1-204ENST00000440437 MAP2K5Q13163 448 aa20.18■□□□□ 0.82
COL16A1-204ENST00000440437 COG2Q14746 738 aa20.18■□□□□ 0.82
COL16A1-204ENST00000440437 CCL14Q16627 93 aa20.18■□□□□ 0.82
COL16A1-204ENST00000440437 SBK1Q52WX2 424 aa20.18■□□□□ 0.82
COL16A1-204ENST00000440437 OTUD7AQ8TE49 926 aaPredicted RBP20.18■□□□□ 0.82
COL16A1-204ENST00000440437 DPF3Q92784 378 aa20.18■□□□□ 0.82
COL16A1-204ENST00000440437 SH2D4AQ9H788 454 aa20.18■□□□□ 0.82
COL16A1-204ENST00000440437 VCPKMTQ9H867 229 aa20.18■□□□□ 0.82
COL16A1-204ENST00000440437 PTPREP23469 700 aa20.17■□□□□ 0.82
COL16A1-204ENST00000440437 GIMAP6Q6P9H5 292 aa20.17■□□□□ 0.82
COL16A1-204ENST00000440437 ANKLE1Q8NAG6 615 aa20.17■□□□□ 0.82
COL16A1-204ENST00000440437 DIS3LQ8TF46 1054 aaKnown RBP20.17■□□□□ 0.82
COL16A1-204ENST00000440437 TANGO6Q9C0B7 1094 aa20.17■□□□□ 0.82
COL16A1-204ENST00000440437 EPB41L4AQ9HCS5 686 aaPredicted RBP20.17■□□□□ 0.82
COL16A1-204ENST00000440437 COLQQ9Y215 455 aaPredicted RBP20.17■□□□□ 0.82
COL16A1-204ENST00000440437 SALL3Q9BXA9 1300 aa20.17■□□□□ 0.82
COL16A1-204ENST00000440437 SLC15A5A6NIM6 579 aa20.16■□□□□ 0.82
COL16A1-204ENST00000440437 M0R2C6 588 aa20.16■□□□□ 0.82
COL16A1-204ENST00000440437 GPAA1O43292 621 aa20.16■□□□□ 0.82
COL16A1-204ENST00000440437 GLRX3O76003 335 aaKnown RBP20.16■□□□□ 0.82
COL16A1-204ENST00000440437 MNX1P50219 401 aaPredicted RBP20.16■□□□□ 0.82
COL16A1-204ENST00000440437 CACNB2Q08289 660 aaPredicted RBP20.16■□□□□ 0.82
COL16A1-204ENST00000440437 GRB14Q14449 540 aa20.16■□□□□ 0.82
COL16A1-204ENST00000440437 PAWRQ96IZ0 340 aaKnown RBP20.16■□□□□ 0.82
COL16A1-204ENST00000440437 CRBNQ96SW2 442 aa20.16■□□□□ 0.82
COL16A1-204ENST00000440437 CWC22Q9HCG8 908 aaKnown RBP20.16■□□□□ 0.82
COL16A1-204ENST00000440437 HOXC10Q9NYD6 342 aa20.16■□□□□ 0.82
COL16A1-204ENST00000440437 OGDHLQ9ULD0 1010 aa20.16■□□□□ 0.82
COL16A1-204ENST00000440437 ZNFX1Q9P2E3 1918 aaKnown RBP20.15■□□□□ 0.82
COL16A1-204ENST00000440437 ERC2O15083 957 aa20.15■□□□□ 0.82
COL16A1-204ENST00000440437 WDR46O15213 610 aaKnown RBP20.15■□□□□ 0.82
COL16A1-204ENST00000440437 HOXC6P09630 235 aa20.15■□□□□ 0.82
COL16A1-204ENST00000440437 EEF2P13639 858 aaKnown RBP20.15■□□□□ 0.82
COL16A1-204ENST00000440437 DSG3P32926 999 aa20.15■□□□□ 0.82
COL16A1-204ENST00000440437 WDR78Q5VTH9 848 aa20.15■□□□□ 0.82
COL16A1-204ENST00000440437 SPICE1Q8N0Z3 855 aa20.15■□□□□ 0.82
COL16A1-204ENST00000440437 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.15■□□□□ 0.82
COL16A1-204ENST00000440437 MOV10L1Q9BXT6 1211 aaKnown RBP20.15■□□□□ 0.82
COL16A1-204ENST00000440437 KANSL2Q9H9L4 492 aa20.15■□□□□ 0.82
COL16A1-204ENST00000440437 RASA1P20936 1047 aa20.14■□□□□ 0.81
COL16A1-204ENST00000440437 NECAB2Q7Z6G3 386 aa20.14■□□□□ 0.81
COL16A1-204ENST00000440437 MB21D1Q8N884 522 aa20.14■□□□□ 0.81
COL16A1-204ENST00000440437 SPATC1LQ9H0A9 340 aa20.14■□□□□ 0.81
COL16A1-204ENST00000440437 FLRT1Q9NZU1 646 aa20.14■□□□□ 0.81
COL16A1-204ENST00000440437 IVNS1ABPQ9Y6Y0 642 aa20.14■□□□□ 0.81
COL16A1-204ENST00000440437 FLOT1O75955 427 aa20.13■□□□□ 0.81
COL16A1-204ENST00000440437 GNAT2P19087 354 aa20.13■□□□□ 0.81
COL16A1-204ENST00000440437 MX1P20591 662 aa20.13■□□□□ 0.81
COL16A1-204ENST00000440437 CCND3P30281 292 aaPredicted RBP20.13■□□□□ 0.81
COL16A1-204ENST00000440437 SHCBP1Q8NEM2 672 aa20.13■□□□□ 0.81
COL16A1-204ENST00000440437 NPLOC4Q8TAT6 608 aa20.13■□□□□ 0.81
COL16A1-204ENST00000440437 ATG4CQ96DT6 458 aa20.13■□□□□ 0.81
COL16A1-204ENST00000440437 PLXNA1Q9UIW2 1896 aa20.13■□□□□ 0.81
COL16A1-204ENST00000440437 IGHA2P01877 340 aa20.12■□□□□ 0.81
COL16A1-204ENST00000440437 LRRFIP1Q32MZ4 808 aaKnown RBP20.12■□□□□ 0.81
COL16A1-204ENST00000440437 CHRDL2Q6WN34 429 aa20.12■□□□□ 0.81
COL16A1-204ENST00000440437 SEC62Q99442 399 aaKnown RBP20.12■□□□□ 0.81
COL16A1-204ENST00000440437 NR2E3Q9Y5X4 410 aa20.12■□□□□ 0.81
COL16A1-204ENST00000440437 MINDY4BA8MYZ0 360 aa20.11■□□□□ 0.81
COL16A1-204ENST00000440437 ERCC3P19447 782 aa20.11■□□□□ 0.81
COL16A1-204ENST00000440437 FXR1P51114 621 aaKnown RBP eCLIP20.11■□□□□ 0.81
COL16A1-204ENST00000440437 ATP2B2Q01814 1243 aa20.11■□□□□ 0.81
COL16A1-204ENST00000440437 LHX8Q68G74 356 aa20.11■□□□□ 0.81
COL16A1-204ENST00000440437 FSD1Q9BTV5 496 aa20.11■□□□□ 0.81
COL16A1-204ENST00000440437 ADAMTS5Q9UNA0 930 aa20.11■□□□□ 0.81
COL16A1-204ENST00000440437 PATL2C9JE40 543 aaKnown RBP20.1■□□□□ 0.81
COL16A1-204ENST00000440437 EVI5O60447 810 aa20.1■□□□□ 0.81
COL16A1-204ENST00000440437 TDO2P48775 406 aa20.1■□□□□ 0.81
COL16A1-204ENST00000440437 HDAC1Q13547 482 aaPredicted RBP20.1■□□□□ 0.81
COL16A1-204ENST00000440437 ZMYM1Q5SVZ6 1142 aa20.1■□□□□ 0.81
COL16A1-204ENST00000440437 IFNL3Q8IZI9 196 aa20.1■□□□□ 0.81
COL16A1-204ENST00000440437 STK11IPQ8N1F8 1099 aa20.1■□□□□ 0.81
COL16A1-204ENST00000440437 NBPF3Q9H094 633 aa20.1■□□□□ 0.81
COL16A1-204ENST00000440437 PRO3102Q9H379 93 aa20.1■□□□□ 0.81
COL16A1-204ENST00000440437 GOPCQ9HD26 462 aa20.1■□□□□ 0.81
COL16A1-204ENST00000440437 NYAP2Q9P242 653 aa20.1■□□□□ 0.81
COL16A1-204ENST00000440437 PFASO15067 1338 aa20.09■□□□□ 0.81
COL16A1-204ENST00000440437 IGKV6D-41A0A0C4DH26 115 aa20.09■□□□□ 0.81
COL16A1-204ENST00000440437 STRNO43815 780 aa20.09■□□□□ 0.81
COL16A1-204ENST00000440437 ADORA2AP29274 412 aa20.09■□□□□ 0.81
COL16A1-204ENST00000440437 TMEM132BQ14DG7 1078 aa20.09■□□□□ 0.81
COL16A1-204ENST00000440437 MFSD14CQ5VZR4 134 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 157.4 ms