RNA–Protein interactions for RNA: ENST00000440223.5

UBE2F-214, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 3

Gene UBE2F, Length 830 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-214ENST00000440223 MTA3Q9BTC8 594 aa18.81■□□□□ 0.6
UBE2F-214ENST00000440223 CYP2D7A0A087X1C5 515 aa18.8■□□□□ 0.6
UBE2F-214ENST00000440223 JAG1P78504 1218 aa18.8■□□□□ 0.6
UBE2F-214ENST00000440223 EXOSC10Q01780 885 aaKnown RBP18.8■□□□□ 0.6
UBE2F-214ENST00000440223 EVX2Q03828 476 aa18.8■□□□□ 0.6
UBE2F-214ENST00000440223 CHMP4CQ96CF2 233 aa18.8■□□□□ 0.6
UBE2F-214ENST00000440223 DYNLL2Q96FJ2 89 aa18.8■□□□□ 0.6
UBE2F-214ENST00000440223 PARK7Q99497 189 aaKnown RBP18.8■□□□□ 0.6
UBE2F-214ENST00000440223 R3HDMLQ9H3Y0 253 aa18.8■□□□□ 0.6
UBE2F-214ENST00000440223 SLC45A1Q9Y2W3 748 aa18.8■□□□□ 0.6
UBE2F-214ENST00000440223 C19orf81C9J6K1 198 aa18.79■□□□□ 0.6
UBE2F-214ENST00000440223 MPHOSPH10O00566 681 aaKnown RBP18.79■□□□□ 0.6
UBE2F-214ENST00000440223 KDM4AO75164 1064 aa18.79■□□□□ 0.6
UBE2F-214ENST00000440223 CDK8P49336 464 aa18.79■□□□□ 0.6
UBE2F-214ENST00000440223 HMGCS2P54868 508 aa18.79■□□□□ 0.6
UBE2F-214ENST00000440223 MTMR2Q13614 643 aa18.79■□□□□ 0.6
UBE2F-214ENST00000440223 RAB3GAP1Q15042 981 aa18.79■□□□□ 0.6
UBE2F-214ENST00000440223 SHROOM1Q2M3G4 852 aaPredicted RBP18.79■□□□□ 0.6
UBE2F-214ENST00000440223 SH3D19Q5HYK7 790 aa18.79■□□□□ 0.6
UBE2F-214ENST00000440223 GPAT2Q6NUI2 795 aa18.79■□□□□ 0.6
UBE2F-214ENST00000440223 STK11IPQ8N1F8 1099 aa18.79■□□□□ 0.6
UBE2F-214ENST00000440223 SLC44A5Q8NCS7 719 aa18.79■□□□□ 0.6
UBE2F-214ENST00000440223 TMX3Q96JJ7 454 aa18.79■□□□□ 0.6
UBE2F-214ENST00000440223 CCDC17Q96LX7 622 aa18.79■□□□□ 0.6
UBE2F-214ENST00000440223 TCEANC2Q96MN5 208 aa18.79■□□□□ 0.6
UBE2F-214ENST00000440223 UBAC1Q9BSL1 405 aa18.79■□□□□ 0.6
UBE2F-214ENST00000440223 MKNK2Q9HBH9 465 aa18.79■□□□□ 0.6
UBE2F-214ENST00000440223 TMOD4Q9NZQ9 345 aa18.79■□□□□ 0.6
UBE2F-214ENST00000440223 AGTPBP1Q9UPW5 1226 aa18.79■□□□□ 0.6
UBE2F-214ENST00000440223 USP17L10C9JJH3 530 aa18.78■□□□□ 0.6
UBE2F-214ENST00000440223 RANBP6O60518 1105 aaKnown RBP18.78■□□□□ 0.6
UBE2F-214ENST00000440223 TLR2O60603 784 aa18.78■□□□□ 0.6
UBE2F-214ENST00000440223 FGRP09769 529 aa18.78■□□□□ 0.6
UBE2F-214ENST00000440223 SLC4A3P48751 1232 aa18.78■□□□□ 0.6
UBE2F-214ENST00000440223 BACE1P56817 501 aa18.78■□□□□ 0.6
UBE2F-214ENST00000440223 PABPC4Q13310 644 aaKnown RBP eCLIP18.78■□□□□ 0.6
UBE2F-214ENST00000440223 TMEM179Q6ZVK1 233 aa18.78■□□□□ 0.6
UBE2F-214ENST00000440223 IQCA1Q86XH1 822 aa18.78■□□□□ 0.6
UBE2F-214ENST00000440223 FBXL16Q8N461 479 aa18.78■□□□□ 0.6
UBE2F-214ENST00000440223 FEZ1Q99689 392 aa18.78■□□□□ 0.6
UBE2F-214ENST00000440223 PNMA3Q9UL41 463 aa18.78■□□□□ 0.6
UBE2F-214ENST00000440223 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.78■□□□□ 0.6
UBE2F-214ENST00000440223 TOB2Q14106 344 aaPredicted RBP18.77■□□□□ 0.6
UBE2F-214ENST00000440223 CCDC178Q5BJE1 867 aa18.77■□□□□ 0.6
UBE2F-214ENST00000440223 BRF1Q92994 677 aa18.77■□□□□ 0.6
UBE2F-214ENST00000440223 ERO1AQ96HE7 468 aa18.77■□□□□ 0.6
UBE2F-214ENST00000440223 IFIT3O14879 490 aaKnown RBP18.76■□□□□ 0.59
UBE2F-214ENST00000440223 USP14P54578 494 aa18.76■□□□□ 0.59
UBE2F-214ENST00000440223 SP3Q02447 781 aa18.76■□□□□ 0.59
UBE2F-214ENST00000440223 TMEM67Q5HYA8 995 aa18.76■□□□□ 0.59
UBE2F-214ENST00000440223 CHST3Q7LGC8 479 aa18.76■□□□□ 0.59
UBE2F-214ENST00000440223 CTU1Q7Z7A3 348 aaKnown RBP18.76■□□□□ 0.59
UBE2F-214ENST00000440223 ZNF444Q8N0Y2 327 aaPredicted RBP18.76■□□□□ 0.59
UBE2F-214ENST00000440223 LRRC2Q9BYS8 371 aa18.76■□□□□ 0.59
UBE2F-214ENST00000440223 AGXT2Q9BYV1 514 aa18.76■□□□□ 0.59
UBE2F-214ENST00000440223 MYH6P13533 1939 aa18.75■□□□□ 0.59
UBE2F-214ENST00000440223 GREB1LQ9C091 1923 aaPredicted RBP18.75■□□□□ 0.59
UBE2F-214ENST00000440223 TSPY2A6NKD2 308 aa18.75■□□□□ 0.59
UBE2F-214ENST00000440223 SMIM22K7EJ46 135 aa18.75■□□□□ 0.59
UBE2F-214ENST00000440223 SH2B2O14492 632 aaPredicted RBP18.75■□□□□ 0.59
UBE2F-214ENST00000440223 ANTXR2P58335 489 aa18.75■□□□□ 0.59
UBE2F-214ENST00000440223 DGKZQ13574 1117 aa18.75■□□□□ 0.59
UBE2F-214ENST00000440223 WTAPQ15007 396 aa18.75■□□□□ 0.59
UBE2F-214ENST00000440223 SEPT2Q15019 361 aa18.75■□□□□ 0.59
UBE2F-214ENST00000440223 USP17L2Q6R6M4 530 aa18.75■□□□□ 0.59
UBE2F-214ENST00000440223 NFXL1Q6ZNB6 911 aa18.75■□□□□ 0.59
UBE2F-214ENST00000440223 CYB5R4Q7L1T6 521 aa18.75■□□□□ 0.59
UBE2F-214ENST00000440223 TMTC2Q8N394 836 aa18.75■□□□□ 0.59
UBE2F-214ENST00000440223 SMCR8Q8TEV9 937 aaPredicted RBP18.75■□□□□ 0.59
UBE2F-214ENST00000440223 ZSWIM5Q9P217 1185 aa18.75■□□□□ 0.59
UBE2F-214ENST00000440223 NAP1L2Q9ULW6 460 aaPredicted RBP18.75■□□□□ 0.59
UBE2F-214ENST00000440223 MYH4Q9Y623 1939 aa18.74■□□□□ 0.59
UBE2F-214ENST00000440223 PRDM1O75626 825 aa18.74■□□□□ 0.59
UBE2F-214ENST00000440223 AKR1B1P15121 316 aa18.74■□□□□ 0.59
UBE2F-214ENST00000440223 OSBPP22059 807 aa18.74■□□□□ 0.59
UBE2F-214ENST00000440223 GUCY1A2P33402 732 aa18.74■□□□□ 0.59
UBE2F-214ENST00000440223 ARHGEF6Q15052 776 aa18.74■□□□□ 0.59
UBE2F-214ENST00000440223 TREML2Q5T2D2 321 aa18.74■□□□□ 0.59
UBE2F-214ENST00000440223 SYNE3Q6ZMZ3 975 aa18.74■□□□□ 0.59
UBE2F-214ENST00000440223 INTS4Q96HW7 963 aaKnown RBP18.74■□□□□ 0.59
UBE2F-214ENST00000440223 KIAA1683Q9H0B3 1180 aa18.74■□□□□ 0.59
UBE2F-214ENST00000440223 SLKQ9H2G2 1235 aaPredicted RBP18.74■□□□□ 0.59
UBE2F-214ENST00000440223 SH2D4AQ9H788 454 aa18.74■□□□□ 0.59
UBE2F-214ENST00000440223 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.74■□□□□ 0.59
UBE2F-214ENST00000440223 ADGRA2Q96PE1 1338 aa18.74■□□□□ 0.59
UBE2F-214ENST00000440223 CCDC69A6NI79 296 aa18.73■□□□□ 0.59
UBE2F-214ENST00000440223 TSPY3P0CV98 308 aa18.73■□□□□ 0.59
UBE2F-214ENST00000440223 TSPY8P0CW00 308 aa18.73■□□□□ 0.59
UBE2F-214ENST00000440223 CYP2C8P10632 490 aa18.73■□□□□ 0.59
UBE2F-214ENST00000440223 LIFRP42702 1097 aa18.73■□□□□ 0.59
UBE2F-214ENST00000440223 ICA1Q05084 483 aa18.73■□□□□ 0.59
UBE2F-214ENST00000440223 CUL4AQ13619 759 aa18.73■□□□□ 0.59
UBE2F-214ENST00000440223 KIF22Q14807 665 aa18.73■□□□□ 0.59
UBE2F-214ENST00000440223 ZYXQ15942 572 aaKnown RBP18.73■□□□□ 0.59
UBE2F-214ENST00000440223 ZNF274Q96GC6 653 aaPredicted RBP18.73■□□□□ 0.59
UBE2F-214ENST00000440223 ARHGEF10LQ9HCE6 1279 aa18.73■□□□□ 0.59
UBE2F-214ENST00000440223 INCENPQ9NQS7 918 aa18.73■□□□□ 0.59
UBE2F-214ENST00000440223 CPA4Q9UI42 421 aa18.73■□□□□ 0.59
UBE2F-214ENST00000440223 TPCN1Q9ULQ1 816 aa18.73■□□□□ 0.59
UBE2F-214ENST00000440223 KLF18A0A0U1RQI7 1052 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms