RNA–Protein interactions for RNA: ENST00000440167.1

SMPD4P2-201, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 2, humanhuman

BASIC

Gene SMPD4P2, Length 1,634 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P2-201ENST00000440167 ATP2B2Q01814 1243 aa13.3□□□□□ -0.28
SMPD4P2-201ENST00000440167 RRP1BQ14684 758 aaKnown RBP13.3□□□□□ -0.28
SMPD4P2-201ENST00000440167 KIF4BQ2VIQ3 1234 aa13.3□□□□□ -0.28
SMPD4P2-201ENST00000440167 TPRNQ4KMQ1 711 aa13.3□□□□□ -0.28
SMPD4P2-201ENST00000440167 FKBP1CQ5VVH2 108 aa13.3□□□□□ -0.28
SMPD4P2-201ENST00000440167 METTL16Q86W50 562 aaKnown RBP13.3□□□□□ -0.28
SMPD4P2-201ENST00000440167 WASF1Q92558 559 aa13.3□□□□□ -0.28
SMPD4P2-201ENST00000440167 ZSCAN16Q9H4T2 348 aaPredicted RBP13.3□□□□□ -0.28
SMPD4P2-201ENST00000440167 RNF181Q9P0P0 153 aa13.3□□□□□ -0.28
SMPD4P2-201ENST00000440167 CLIP2Q9UDT6 1046 aa13.3□□□□□ -0.28
SMPD4P2-201ENST00000440167 PRPF3O43395 683 aaKnown RBP13.29□□□□□ -0.28
SMPD4P2-201ENST00000440167 TTLL1O95922 423 aa13.29□□□□□ -0.28
SMPD4P2-201ENST00000440167 AKAP17AQ02040 695 aaKnown RBP13.29□□□□□ -0.28
SMPD4P2-201ENST00000440167 PKN1Q16512 942 aa13.29□□□□□ -0.28
SMPD4P2-201ENST00000440167 FAM83AQ86UY5 434 aa13.29□□□□□ -0.28
SMPD4P2-201ENST00000440167 CCDC17Q96LX7 622 aa13.29□□□□□ -0.28
SMPD4P2-201ENST00000440167 MAP3K14Q99558 947 aa13.29□□□□□ -0.28
SMPD4P2-201ENST00000440167 TFIP11Q9UBB9 837 aaKnown RBP13.29□□□□□ -0.28
SMPD4P2-201ENST00000440167 KCNJ14Q9UNX9 436 aa13.29□□□□□ -0.28
SMPD4P2-201ENST00000440167 V9GY48 417 aaPredicted RBP13.29□□□□□ -0.28
SMPD4P2-201ENST00000440167 USP17L5A8MUK1 530 aa13.28□□□□□ -0.28
SMPD4P2-201ENST00000440167 GADD45BO75293 160 aaPredicted RBP13.28□□□□□ -0.28
SMPD4P2-201ENST00000440167 MMP14P50281 582 aa13.28□□□□□ -0.28
SMPD4P2-201ENST00000440167 KRT85P78386 507 aa13.28□□□□□ -0.28
SMPD4P2-201ENST00000440167 JAG1P78504 1218 aa13.28□□□□□ -0.28
SMPD4P2-201ENST00000440167 KIF23Q02241 960 aaPredicted RBP13.28□□□□□ -0.28
SMPD4P2-201ENST00000440167 TRIM29Q14134 588 aa13.28□□□□□ -0.28
SMPD4P2-201ENST00000440167 SEPT2Q15019 361 aa13.28□□□□□ -0.28
SMPD4P2-201ENST00000440167 ABCB5Q2M3G0 1257 aa13.28□□□□□ -0.28
SMPD4P2-201ENST00000440167 SLC35G1Q2M3R5 365 aa13.28□□□□□ -0.28
SMPD4P2-201ENST00000440167 USP17L2Q6R6M4 530 aa13.28□□□□□ -0.28
SMPD4P2-201ENST00000440167 GPC2Q8N158 579 aa13.28□□□□□ -0.28
SMPD4P2-201ENST00000440167 SHISA4Q96DD7 197 aa13.28□□□□□ -0.28
SMPD4P2-201ENST00000440167 CPVLQ9H3G5 476 aa13.28□□□□□ -0.28
SMPD4P2-201ENST00000440167 HACL1Q9UJ83 578 aa13.28□□□□□ -0.28
SMPD4P2-201ENST00000440167 FRMPD2Q68DX3 1309 aaPredicted RBP13.28□□□□□ -0.28
SMPD4P2-201ENST00000440167 PALM3A6NDB9 673 aaPredicted RBP13.28□□□□□ -0.28
SMPD4P2-201ENST00000440167 H7C1D1 291 aa13.28□□□□□ -0.28
SMPD4P2-201ENST00000440167 PARP1P09874 1014 aaKnown RBP13.28□□□□□ -0.28
SMPD4P2-201ENST00000440167 TNNI2P48788 182 aa13.28□□□□□ -0.28
SMPD4P2-201ENST00000440167 RASA3Q14644 834 aa13.28□□□□□ -0.28
SMPD4P2-201ENST00000440167 MIGA2Q7L4E1 593 aa13.28□□□□□ -0.28
SMPD4P2-201ENST00000440167 GPT2Q8TD30 523 aa13.28□□□□□ -0.28
SMPD4P2-201ENST00000440167 TRPM4Q8TD43 1214 aa13.28□□□□□ -0.28
SMPD4P2-201ENST00000440167 FTOQ9C0B1 505 aaKnown RBP eCLIP13.28□□□□□ -0.28
SMPD4P2-201ENST00000440167 GPRC5DQ9NZD1 345 aa13.28□□□□□ -0.28
SMPD4P2-201ENST00000440167 VPS54Q9P1Q0 977 aa13.28□□□□□ -0.28
SMPD4P2-201ENST00000440167 PGAP2Q9UHJ9 254 aa13.28□□□□□ -0.28
SMPD4P2-201ENST00000440167 HERC5Q9UII4 1024 aaKnown RBP13.28□□□□□ -0.28
SMPD4P2-201ENST00000440167 DDX49Q9Y6V7 483 aaKnown RBP13.28□□□□□ -0.28
SMPD4P2-201ENST00000440167 UTRNP46939 3433 aa13.27□□□□□ -0.29
SMPD4P2-201ENST00000440167 DDNO94850 711 aaPredicted RBP13.27□□□□□ -0.29
SMPD4P2-201ENST00000440167 GH2P01242 217 aa13.27□□□□□ -0.29
SMPD4P2-201ENST00000440167 EEF2P13639 858 aaKnown RBP13.27□□□□□ -0.29
SMPD4P2-201ENST00000440167 EPS15P42566 896 aa13.27□□□□□ -0.29
SMPD4P2-201ENST00000440167 CEBPZQ03701 1054 aaKnown RBP13.27□□□□□ -0.29
SMPD4P2-201ENST00000440167 C9orf131Q5VYM1 1079 aa13.27□□□□□ -0.29
SMPD4P2-201ENST00000440167 TMEM87AQ8NBN3 555 aa13.27□□□□□ -0.29
SMPD4P2-201ENST00000440167 GZF1Q9H116 711 aaPredicted RBP13.27□□□□□ -0.29
SMPD4P2-201ENST00000440167 DOCK1Q14185 1865 aa13.26□□□□□ -0.29
SMPD4P2-201ENST00000440167 KLRF2D3W0D1 207 aa13.26□□□□□ -0.29
SMPD4P2-201ENST00000440167 CYTH3O43739 400 aa13.26□□□□□ -0.29
SMPD4P2-201ENST00000440167 MMP1P03956 469 aa13.26□□□□□ -0.29
SMPD4P2-201ENST00000440167 PDHBP11177 359 aa13.26□□□□□ -0.29
SMPD4P2-201ENST00000440167 VEGFAP15692 232 aaPredicted RBP13.26□□□□□ -0.29
SMPD4P2-201ENST00000440167 GNAQP50148 359 aa13.26□□□□□ -0.29
SMPD4P2-201ENST00000440167 ICA1Q05084 483 aa13.26□□□□□ -0.29
SMPD4P2-201ENST00000440167 GNL2Q13823 731 aaKnown RBP13.26□□□□□ -0.29
SMPD4P2-201ENST00000440167 SKOR2Q2VWA4 1001 aaPredicted RBP13.26□□□□□ -0.29
SMPD4P2-201ENST00000440167 TMEM179Q6ZVK1 233 aa13.26□□□□□ -0.29
SMPD4P2-201ENST00000440167 RAD21O60216 631 aa13.25□□□□□ -0.29
SMPD4P2-201ENST00000440167 TNFAIP1Q13829 316 aa13.25□□□□□ -0.29
SMPD4P2-201ENST00000440167 ANGEL2Q5VTE6 544 aaKnown RBP13.25□□□□□ -0.29
SMPD4P2-201ENST00000440167 RGS22Q8NE09 1264 aa13.25□□□□□ -0.29
SMPD4P2-201ENST00000440167 SPATA32Q96LK8 384 aa13.25□□□□□ -0.29
SMPD4P2-201ENST00000440167 TEPSINQ96N21 525 aa13.25□□□□□ -0.29
SMPD4P2-201ENST00000440167 UBA5Q9GZZ9 404 aa13.25□□□□□ -0.29
SMPD4P2-201ENST00000440167 KANSL2Q9H9L4 492 aa13.25□□□□□ -0.29
SMPD4P2-201ENST00000440167 CABP5Q9NP86 173 aa13.25□□□□□ -0.29
SMPD4P2-201ENST00000440167 GPCPD1Q9NPB8 672 aa13.25□□□□□ -0.29
SMPD4P2-201ENST00000440167 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.25□□□□□ -0.29
SMPD4P2-201ENST00000440167 BTBD18B2RXH4 712 aa13.24□□□□□ -0.29
SMPD4P2-201ENST00000440167 SCG2P13521 617 aa13.24□□□□□ -0.29
SMPD4P2-201ENST00000440167 GPR162Q16538 588 aa13.24□□□□□ -0.29
SMPD4P2-201ENST00000440167 PFKFB3Q16875 520 aaPredicted RBP13.24□□□□□ -0.29
SMPD4P2-201ENST00000440167 KLHL40Q2TBA0 621 aa13.24□□□□□ -0.29
SMPD4P2-201ENST00000440167 MYSM1Q5VVJ2 828 aa13.24□□□□□ -0.29
SMPD4P2-201ENST00000440167 BRAPQ7Z569 592 aa13.24□□□□□ -0.29
SMPD4P2-201ENST00000440167 SIAH1Q8IUQ4 282 aa13.24□□□□□ -0.29
SMPD4P2-201ENST00000440167 DIS3L2Q8IYB7 885 aaKnown RBP13.24□□□□□ -0.29
SMPD4P2-201ENST00000440167 OXER1Q8TDS5 423 aa13.24□□□□□ -0.29
SMPD4P2-201ENST00000440167 LEO1Q8WVC0 666 aaPredicted RBP13.24□□□□□ -0.29
SMPD4P2-201ENST00000440167 GPKOWQ92917 476 aaPredicted RBP eCLIP13.24□□□□□ -0.29
SMPD4P2-201ENST00000440167 ZNF396Q96N95 335 aaPredicted RBP13.24□□□□□ -0.29
SMPD4P2-201ENST00000440167 USP28Q96RU2 1077 aa13.24□□□□□ -0.29
SMPD4P2-201ENST00000440167 NYAP2Q9P242 653 aa13.24□□□□□ -0.29
SMPD4P2-201ENST00000440167 RBM27Q9P2N5 1060 aaKnown RBP13.24□□□□□ -0.29
SMPD4P2-201ENST00000440167 TBC1D12O60347 775 aa13.24□□□□□ -0.29
SMPD4P2-201ENST00000440167 SNHG28P0DPA3 235 aa13.24□□□□□ -0.29
SMPD4P2-201ENST00000440167 XBP1P17861 261 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms