RNA–Protein interactions for RNA: ENST00000439974.3

ITGB1-207, Transcript of integrin subunit beta 1, humanhuman

TSL 5

Gene ITGB1, Length 580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-207ENST00000439974 MAP3K21Q5TCX8 1036 aa19.28■□□□□ 0.68
ITGB1-207ENST00000439974 LBX2Q6XYB7 198 aa19.28■□□□□ 0.68
ITGB1-207ENST00000439974 TMEM179Q6ZVK1 233 aa19.28■□□□□ 0.68
ITGB1-207ENST00000439974 APBA2Q99767 749 aa19.28■□□□□ 0.68
ITGB1-207ENST00000439974 RPAP3Q9H6T3 665 aaPredicted RBP19.28■□□□□ 0.68
ITGB1-207ENST00000439974 PRKAB2O43741 272 aa19.27■□□□□ 0.68
ITGB1-207ENST00000439974 EVI5O60447 810 aa19.27■□□□□ 0.68
ITGB1-207ENST00000439974 PDE4AP27815 886 aa19.27■□□□□ 0.68
ITGB1-207ENST00000439974 ZSCAN25Q6NSZ9 544 aa19.27■□□□□ 0.68
ITGB1-207ENST00000439974 PLEKHM2Q8IWE5 1019 aa19.27■□□□□ 0.68
ITGB1-207ENST00000439974 KBTBD3Q8NAB2 608 aa19.27■□□□□ 0.68
ITGB1-207ENST00000439974 SLC44A5Q8NCS7 719 aa19.27■□□□□ 0.68
ITGB1-207ENST00000439974 DIS3LQ8TF46 1054 aaKnown RBP19.27■□□□□ 0.68
ITGB1-207ENST00000439974 STAP2Q9UGK3 403 aa19.27■□□□□ 0.68
ITGB1-207ENST00000439974 A0A1W2PRG0 241 aa19.26■□□□□ 0.67
ITGB1-207ENST00000439974 SPDYE16A6NNV3 312 aaPredicted RBP19.26■□□□□ 0.67
ITGB1-207ENST00000439974 CENPBP07199 599 aaPredicted RBP19.26■□□□□ 0.67
ITGB1-207ENST00000439974 MAP2K5Q13163 448 aa19.26■□□□□ 0.67
ITGB1-207ENST00000439974 AMOTL1Q8IY63 956 aa19.26■□□□□ 0.67
ITGB1-207ENST00000439974 DYNLL2Q96FJ2 89 aa19.26■□□□□ 0.67
ITGB1-207ENST00000439974 DDRGK1Q96HY6 314 aa19.26■□□□□ 0.67
ITGB1-207ENST00000439974 PUS7LQ9H0K6 701 aaKnown RBP19.26■□□□□ 0.67
ITGB1-207ENST00000439974 CCL14Q16627 93 aa19.25■□□□□ 0.67
ITGB1-207ENST00000439974 WDR78Q5VTH9 848 aa19.25■□□□□ 0.67
ITGB1-207ENST00000439974 SKAP1Q86WV1 359 aa19.25■□□□□ 0.67
ITGB1-207ENST00000439974 FSD1Q9BTV5 496 aa19.25■□□□□ 0.67
ITGB1-207ENST00000439974 BTBD7Q9P203 1132 aa19.25■□□□□ 0.67
ITGB1-207ENST00000439974 OGDHLQ9ULD0 1010 aa19.25■□□□□ 0.67
ITGB1-207ENST00000439974 ALPK3Q96L96 1907 aa19.25■□□□□ 0.67
ITGB1-207ENST00000439974 CACNB2Q08289 660 aaPredicted RBP19.24■□□□□ 0.67
ITGB1-207ENST00000439974 CCDC17Q96LX7 622 aa19.24■□□□□ 0.67
ITGB1-207ENST00000439974 NBPF3Q9H094 633 aa19.24■□□□□ 0.67
ITGB1-207ENST00000439974 ARHGEF10LQ9HCE6 1279 aa19.24■□□□□ 0.67
ITGB1-207ENST00000439974 HOXC10Q9NYD6 342 aa19.24■□□□□ 0.67
ITGB1-207ENST00000439974 RBM27Q9P2N5 1060 aaKnown RBP19.24■□□□□ 0.67
ITGB1-207ENST00000439974 RANBP2P49792 3224 aaKnown RBP19.24■□□□□ 0.67
ITGB1-207ENST00000439974 SLC15A5A6NIM6 579 aa19.23■□□□□ 0.67
ITGB1-207ENST00000439974 USP17L12C9JPN9 530 aa19.23■□□□□ 0.67
ITGB1-207ENST00000439974 USP17L21D6R901 530 aa19.23■□□□□ 0.67
ITGB1-207ENST00000439974 RNF113AO15541 343 aaKnown RBP19.23■□□□□ 0.67
ITGB1-207ENST00000439974 AKR1B1P15121 316 aa19.23■□□□□ 0.67
ITGB1-207ENST00000439974 PTPREP23469 700 aa19.23■□□□□ 0.67
ITGB1-207ENST00000439974 ICA1Q05084 483 aa19.23■□□□□ 0.67
ITGB1-207ENST00000439974 COG2Q14746 738 aa19.23■□□□□ 0.67
ITGB1-207ENST00000439974 C12orf60Q5U649 245 aa19.23■□□□□ 0.67
ITGB1-207ENST00000439974 LPAR1Q92633 364 aa19.23■□□□□ 0.67
ITGB1-207ENST00000439974 OSBP2Q969R2 916 aa19.23■□□□□ 0.67
ITGB1-207ENST00000439974 SEC62Q99442 399 aaKnown RBP19.23■□□□□ 0.67
ITGB1-207ENST00000439974 TANGO6Q9C0B7 1094 aa19.23■□□□□ 0.67
ITGB1-207ENST00000439974 PRO3102Q9H379 93 aa19.23■□□□□ 0.67
ITGB1-207ENST00000439974 SH2D4AQ9H788 454 aa19.23■□□□□ 0.67
ITGB1-207ENST00000439974 SLC4A4Q9Y6R1 1079 aa19.23■□□□□ 0.67
ITGB1-207ENST00000439974 IVNS1ABPQ9Y6Y0 642 aa19.23■□□□□ 0.67
ITGB1-207ENST00000439974 M0R2C6 588 aa19.22■□□□□ 0.67
ITGB1-207ENST00000439974 CDK8P49336 464 aa19.22■□□□□ 0.67
ITGB1-207ENST00000439974 MNX1P50219 401 aaPredicted RBP19.22■□□□□ 0.67
ITGB1-207ENST00000439974 GRB14Q14449 540 aa19.22■□□□□ 0.67
ITGB1-207ENST00000439974 C16orf86Q6ZW13 317 aa19.22■□□□□ 0.67
ITGB1-207ENST00000439974 C11orf49Q9H6J7 331 aa19.22■□□□□ 0.67
ITGB1-207ENST00000439974 TMX2Q9Y320 296 aa19.22■□□□□ 0.67
ITGB1-207ENST00000439974 RLFQ13129 1914 aa19.21■□□□□ 0.67
ITGB1-207ENST00000439974 CYP2D7A0A087X1C5 515 aa19.21■□□□□ 0.67
ITGB1-207ENST00000439974 TRIM6-TRIM34B2RNG4 842 aa19.21■□□□□ 0.67
ITGB1-207ENST00000439974 NEFLP07196 543 aa19.21■□□□□ 0.67
ITGB1-207ENST00000439974 CCND3P30281 292 aaPredicted RBP19.21■□□□□ 0.67
ITGB1-207ENST00000439974 MFSD14CQ5VZR4 134 aa19.21■□□□□ 0.67
ITGB1-207ENST00000439974 CLEC10AQ8IUN9 316 aa19.21■□□□□ 0.67
ITGB1-207ENST00000439974 RILPL2Q969X0 211 aa19.21■□□□□ 0.67
ITGB1-207ENST00000439974 A0A0G2JMZ2 1700 aa19.2■□□□□ 0.66
ITGB1-207ENST00000439974 SMIM22K7EJ46 135 aa19.2■□□□□ 0.66
ITGB1-207ENST00000439974 HOXC6P09630 235 aa19.2■□□□□ 0.66
ITGB1-207ENST00000439974 KIAA1755Q5JYT7 1200 aa19.2■□□□□ 0.66
ITGB1-207ENST00000439974 CTR9Q6PD62 1173 aa19.2■□□□□ 0.66
ITGB1-207ENST00000439974 SIAH1Q8IUQ4 282 aa19.2■□□□□ 0.66
ITGB1-207ENST00000439974 MB21D1Q8N884 522 aa19.2■□□□□ 0.66
ITGB1-207ENST00000439974 APPBP2Q92624 585 aa19.2■□□□□ 0.66
ITGB1-207ENST00000439974 MOV10L1Q9BXT6 1211 aaKnown RBP19.2■□□□□ 0.66
ITGB1-207ENST00000439974 VCPKMTQ9H867 229 aa19.2■□□□□ 0.66
ITGB1-207ENST00000439974 ARPP21Q9UBL0 812 aaPredicted RBP19.2■□□□□ 0.66
ITGB1-207ENST00000439974 DSG3P32926 999 aa19.19■□□□□ 0.66
ITGB1-207ENST00000439974 LHX8Q68G74 356 aa19.19■□□□□ 0.66
ITGB1-207ENST00000439974 CCDC129Q6ZRS4 1044 aa19.19■□□□□ 0.66
ITGB1-207ENST00000439974 C7orf61Q8IZ16 206 aa19.19■□□□□ 0.66
ITGB1-207ENST00000439974 SHCBP1Q8NEM2 672 aa19.19■□□□□ 0.66
ITGB1-207ENST00000439974 EVI5LQ96CN4 794 aa19.19■□□□□ 0.66
ITGB1-207ENST00000439974 SPATC1LQ9H0A9 340 aa19.19■□□□□ 0.66
ITGB1-207ENST00000439974 FLRT1Q9NZU1 646 aa19.19■□□□□ 0.66
ITGB1-207ENST00000439974 WDR46O15213 610 aaKnown RBP19.18■□□□□ 0.66
ITGB1-207ENST00000439974 FLOT1O75955 427 aa19.18■□□□□ 0.66
ITGB1-207ENST00000439974 ATP2B2Q01814 1243 aa19.18■□□□□ 0.66
ITGB1-207ENST00000439974 SPICE1Q8N0Z3 855 aa19.18■□□□□ 0.66
ITGB1-207ENST00000439974 NPLOC4Q8TAT6 608 aa19.18■□□□□ 0.66
ITGB1-207ENST00000439974 STRBPQ96SI9 672 aaKnown RBP19.18■□□□□ 0.66
ITGB1-207ENST00000439974 ZNF236Q9UL36 1845 aa19.18■□□□□ 0.66
ITGB1-207ENST00000439974 FRMPD3Q5JV73 1810 aa19.17■□□□□ 0.66
ITGB1-207ENST00000439974 A0A1W2PPC1 479 aa19.17■□□□□ 0.66
ITGB1-207ENST00000439974 GPAA1O43292 621 aa19.17■□□□□ 0.66
ITGB1-207ENST00000439974 STRNO43815 780 aa19.17■□□□□ 0.66
ITGB1-207ENST00000439974 ZFYP08048 801 aaPredicted RBP19.17■□□□□ 0.66
ITGB1-207ENST00000439974 ERCC3P19447 782 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms