RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 AKNAD1Q5T1N1 836 aa10.18□□□□□ -0.78
COPB1-202ENST00000439561 NBPF14Q5TI25 921 aa10.18□□□□□ -0.78
COPB1-202ENST00000439561 NBPF10Q6P3W6 841 aaKnown RBP10.18□□□□□ -0.78
COPB1-202ENST00000439561 CATIPQ7Z7H3 387 aa10.18□□□□□ -0.78
COPB1-202ENST00000439561 NBPF15Q8N660 670 aa10.18□□□□□ -0.78
COPB1-202ENST00000439561 OR8K1Q8NGG5 319 aa10.18□□□□□ -0.78
COPB1-202ENST00000439561 CCDC47Q96A33 483 aaKnown RBP10.18□□□□□ -0.78
COPB1-202ENST00000439561 MMS19Q96T76 1030 aa10.18□□□□□ -0.78
COPB1-202ENST00000439561 CNNM2Q9H8M5 875 aa10.18□□□□□ -0.78
COPB1-202ENST00000439561 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.18□□□□□ -0.78
COPB1-202ENST00000439561 LOC102724159A0A0B4J2E5 919 aa10.17□□□□□ -0.78
COPB1-202ENST00000439561 PATL2C9JE40 543 aaKnown RBP10.17□□□□□ -0.78
COPB1-202ENST00000439561 AKR1B10O60218 316 aa10.17□□□□□ -0.78
COPB1-202ENST00000439561 NDUFA10O95299 355 aa10.17□□□□□ -0.78
COPB1-202ENST00000439561 ZNF18P17022 549 aa10.17□□□□□ -0.78
COPB1-202ENST00000439561 PAFAH1B1P43034 410 aa10.17□□□□□ -0.78
COPB1-202ENST00000439561 TOB1P50616 345 aaPredicted RBP10.17□□□□□ -0.78
COPB1-202ENST00000439561 KRT83P78385 493 aa10.17□□□□□ -0.78
COPB1-202ENST00000439561 PWP2Q15269 919 aaKnown RBP10.17□□□□□ -0.78
COPB1-202ENST00000439561 CCDC178Q5BJE1 867 aa10.17□□□□□ -0.78
COPB1-202ENST00000439561 TTC38Q5R3I4 469 aa10.17□□□□□ -0.78
COPB1-202ENST00000439561 ANKRD18AQ8IVF6 992 aa10.17□□□□□ -0.78
COPB1-202ENST00000439561 ANKRD13CQ8N6S4 541 aa10.17□□□□□ -0.78
COPB1-202ENST00000439561 CCDC42Q96M95 316 aa10.17□□□□□ -0.78
COPB1-202ENST00000439561 BCCIPQ9P287 314 aaKnown RBP eCLIP10.17□□□□□ -0.78
COPB1-202ENST00000439561 ADD3Q9UEY8 706 aaKnown RBP10.17□□□□□ -0.78
COPB1-202ENST00000439561 GDAQ9Y2T3 454 aa10.17□□□□□ -0.78
COPB1-202ENST00000439561 SRPRBQ9Y5M8 271 aaKnown RBP10.17□□□□□ -0.78
COPB1-202ENST00000439561 TRIM49BA6NDI0 452 aa10.17□□□□□ -0.78
COPB1-202ENST00000439561 HSF2BPO75031 334 aa10.17□□□□□ -0.78
COPB1-202ENST00000439561 USP8P40818 1118 aa10.17□□□□□ -0.78
COPB1-202ENST00000439561 ERVK-24P63145 666 aa10.17□□□□□ -0.78
COPB1-202ENST00000439561 PTGDRQ13258 359 aa10.17□□□□□ -0.78
COPB1-202ENST00000439561 TDRD12Q587J7 1177 aaKnown RBP10.17□□□□□ -0.78
COPB1-202ENST00000439561 IFIT1BQ5T764 474 aaKnown RBP10.17□□□□□ -0.78
COPB1-202ENST00000439561 RASGRP2Q7LDG7 609 aa10.17□□□□□ -0.78
COPB1-202ENST00000439561 OTUD6BQ8N6M0 293 aa10.17□□□□□ -0.78
COPB1-202ENST00000439561 FANCBQ8NB91 859 aa10.17□□□□□ -0.78
COPB1-202ENST00000439561 NKX2-3Q8TAU0 364 aa10.17□□□□□ -0.78
COPB1-202ENST00000439561 KAT6BQ8WYB5 2073 aa10.17□□□□□ -0.78
COPB1-202ENST00000439561 IFNAR1P17181 557 aa10.17□□□□□ -0.78
COPB1-202ENST00000439561 TBC1D8BQ0IIM8 1120 aa10.17□□□□□ -0.78
COPB1-202ENST00000439561 SDR42E1Q8WUS8 393 aa10.17□□□□□ -0.78
COPB1-202ENST00000439561 CCDC51Q96ER9 411 aa10.17□□□□□ -0.78
COPB1-202ENST00000439561 GREM2Q9H772 168 aa10.17□□□□□ -0.78
COPB1-202ENST00000439561 CYP27B1O15528 508 aa10.16□□□□□ -0.78
COPB1-202ENST00000439561 USO1O60763 962 aaKnown RBP10.16□□□□□ -0.78
COPB1-202ENST00000439561 UBA7P41226 1012 aa10.16□□□□□ -0.78
COPB1-202ENST00000439561 SF3A3Q12874 501 aaKnown RBP eCLIP10.16□□□□□ -0.78
COPB1-202ENST00000439561 ODF2Q5BJF6 829 aa10.16□□□□□ -0.78
COPB1-202ENST00000439561 MAATS1Q7Z4T9 603 aa10.16□□□□□ -0.78
COPB1-202ENST00000439561 TADA2BQ86TJ2 420 aa10.16□□□□□ -0.78
COPB1-202ENST00000439561 HNRNPLLQ8WVV9 542 aaKnown RBP10.16□□□□□ -0.78
COPB1-202ENST00000439561 SELENOOQ9BVL4 669 aa10.16□□□□□ -0.78
COPB1-202ENST00000439561 CAPS2Q9BXY5 557 aa10.16□□□□□ -0.78
COPB1-202ENST00000439561 CAPN7Q9Y6W3 813 aa10.16□□□□□ -0.78
COPB1-202ENST00000439561 ACTN4O43707 911 aaKnown RBP10.16□□□□□ -0.78
COPB1-202ENST00000439561 SSBP05455 408 aaKnown RBP eCLIP10.16□□□□□ -0.78
COPB1-202ENST00000439561 CYP7A1P22680 504 aa10.16□□□□□ -0.78
COPB1-202ENST00000439561 PPARAQ07869 468 aa10.16□□□□□ -0.78
COPB1-202ENST00000439561 EFCAB13Q8IY85 973 aa10.16□□□□□ -0.78
COPB1-202ENST00000439561 EHBP1Q8NDI1 1231 aa10.16□□□□□ -0.78
COPB1-202ENST00000439561 EHD4Q9H223 541 aa10.16□□□□□ -0.78
COPB1-202ENST00000439561 FOXP1Q9H334 677 aaPredicted RBP10.16□□□□□ -0.78
COPB1-202ENST00000439561 RNF41Q9H4P4 317 aaPredicted RBP10.16□□□□□ -0.78
COPB1-202ENST00000439561 MMRN2Q9H8L6 949 aa10.16□□□□□ -0.78
COPB1-202ENST00000439561 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.16□□□□□ -0.78
COPB1-202ENST00000439561 CPDO75976 1380 aa10.16□□□□□ -0.78
COPB1-202ENST00000439561 TTC26A0AVF1 554 aa10.15□□□□□ -0.78
COPB1-202ENST00000439561 B4DLN1 442 aa10.15□□□□□ -0.78
COPB1-202ENST00000439561 EVA1CP58658 441 aa10.15□□□□□ -0.78
COPB1-202ENST00000439561 CUL4BQ13620 913 aa10.15□□□□□ -0.78
COPB1-202ENST00000439561 HLTFQ14527 1009 aaKnown RBP eCLIP10.15□□□□□ -0.78
COPB1-202ENST00000439561 FBXW10Q5XX13 1052 aa10.15□□□□□ -0.78
COPB1-202ENST00000439561 IQCA1Q86XH1 822 aa10.15□□□□□ -0.78
COPB1-202ENST00000439561 MSANTD4Q8NCY6 345 aa10.15□□□□□ -0.78
COPB1-202ENST00000439561 IGDCC4Q8TDY8 1250 aa10.15□□□□□ -0.78
COPB1-202ENST00000439561 ESR2Q92731 530 aa10.15□□□□□ -0.78
COPB1-202ENST00000439561 GSDMAQ96QA5 445 aa10.15□□□□□ -0.78
COPB1-202ENST00000439561 HAUS4Q9H6D7 363 aa10.15□□□□□ -0.78
COPB1-202ENST00000439561 AGLP35573 1532 aa10.15□□□□□ -0.78
COPB1-202ENST00000439561 PSMA7O14818 248 aa10.15□□□□□ -0.78
COPB1-202ENST00000439561 HPDP32754 393 aaPredicted RBP10.15□□□□□ -0.78
COPB1-202ENST00000439561 CRACR2BQ8N4Y2 399 aaPredicted RBP10.15□□□□□ -0.78
COPB1-202ENST00000439561 KAT14Q9H8E8 782 aa10.15□□□□□ -0.78
COPB1-202ENST00000439561 DIP2BQ9P265 1576 aa10.15□□□□□ -0.78
COPB1-202ENST00000439561 AKAP12Q02952 1782 aa10.15□□□□□ -0.78
COPB1-202ENST00000439561 IRS4O14654 1257 aaPredicted RBP10.15□□□□□ -0.79
COPB1-202ENST00000439561 TACC1O75410 805 aa10.15□□□□□ -0.79
COPB1-202ENST00000439561 CIAO1O76071 339 aa10.15□□□□□ -0.79
COPB1-202ENST00000439561 PARP1P09874 1014 aaKnown RBP10.15□□□□□ -0.79
COPB1-202ENST00000439561 SLC5A1P13866 664 aa10.15□□□□□ -0.79
COPB1-202ENST00000439561 CDR1P51861 262 aa10.15□□□□□ -0.79
COPB1-202ENST00000439561 USP14P54578 494 aa10.15□□□□□ -0.79
COPB1-202ENST00000439561 TYW1BQ6NUM6 668 aa10.15□□□□□ -0.79
COPB1-202ENST00000439561 CSGALNACT2Q8N6G5 542 aa10.15□□□□□ -0.79
COPB1-202ENST00000439561 SMCR8Q8TEV9 937 aaPredicted RBP10.15□□□□□ -0.79
COPB1-202ENST00000439561 SECISBP2LQ93073 1101 aaKnown RBP10.15□□□□□ -0.79
COPB1-202ENST00000439561 PRDM11Q9NQV5 511 aa10.15□□□□□ -0.79
COPB1-202ENST00000439561 RMND1Q9NWS8 449 aa10.15□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms