RNA–Protein interactions for RNA: ENST00000439211.6

DHFR-201, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-201ENST00000439211 RSRC2Q7L4I2 434 aaKnown RBP17.72■□□□□ 0.43
DHFR-201ENST00000439211 GRAMD1CQ8IYS0 662 aa17.72■□□□□ 0.43
DHFR-201ENST00000439211 TBC1D22AQ8WUA7 517 aa17.72■□□□□ 0.43
DHFR-201ENST00000439211 SENP2Q9HC62 589 aa17.72■□□□□ 0.43
DHFR-201ENST00000439211 FER1L4A9Z1Z3 1794 aa17.72■□□□□ 0.43
DHFR-201ENST00000439211 VWA3AA6NCI4 1184 aa17.72■□□□□ 0.43
DHFR-201ENST00000439211 UQCRFS1P1P0C7P4 283 aa17.72■□□□□ 0.43
DHFR-201ENST00000439211 TUBB4BP68371 445 aa17.72■□□□□ 0.43
DHFR-201ENST00000439211 SNCBQ16143 134 aa17.72■□□□□ 0.43
DHFR-201ENST00000439211 ERVV-2B6SEH9 535 aa17.72■□□□□ 0.43
DHFR-201ENST00000439211 ZMYND10O75800 440 aa17.72■□□□□ 0.43
DHFR-201ENST00000439211 CDC27P30260 824 aa17.72■□□□□ 0.43
DHFR-201ENST00000439211 ZBTB38Q8NAP3 1195 aaPredicted RBP17.72■□□□□ 0.43
DHFR-201ENST00000439211 TMEM87BQ96K49 555 aa17.72■□□□□ 0.43
DHFR-201ENST00000439211 PIH1D3Q9NQM4 214 aaKnown RBP17.72■□□□□ 0.43
DHFR-201ENST00000439211 TMEM232C9JQI7 657 aa17.71■□□□□ 0.43
DHFR-201ENST00000439211 UBE2Q2LH0YL09 131 aa17.71■□□□□ 0.43
DHFR-201ENST00000439211 STAMQ92783 540 aa17.71■□□□□ 0.43
DHFR-201ENST00000439211 DPF2Q92785 391 aa17.71■□□□□ 0.43
DHFR-201ENST00000439211 KLC4Q9NSK0 619 aa17.71■□□□□ 0.43
DHFR-201ENST00000439211 SERTAD1Q9UHV2 236 aa17.71■□□□□ 0.43
DHFR-201ENST00000439211 SH3BP1Q9Y3L3 701 aa17.71■□□□□ 0.43
DHFR-201ENST00000439211 ATP1A2P50993 1020 aa17.71■□□□□ 0.43
DHFR-201ENST00000439211 FKBP15Q5T1M5 1219 aa17.71■□□□□ 0.43
DHFR-201ENST00000439211 CAPZA3Q96KX2 299 aa17.71■□□□□ 0.43
DHFR-201ENST00000439211 HPS5Q9UPZ3 1129 aa17.71■□□□□ 0.43
DHFR-201ENST00000439211 ADD2P35612 726 aa17.71■□□□□ 0.43
DHFR-201ENST00000439211 KCNJ6P48051 423 aa17.71■□□□□ 0.43
DHFR-201ENST00000439211 CEP131Q9UPN4 1083 aa17.71■□□□□ 0.43
DHFR-201ENST00000439211 FOXN1O15353 648 aa17.7■□□□□ 0.42
DHFR-201ENST00000439211 PCCAP05165 728 aaPredicted RBP17.7■□□□□ 0.42
DHFR-201ENST00000439211 STAG1Q8WVM7 1258 aa17.7■□□□□ 0.42
DHFR-201ENST00000439211 TEX13AQ9BXU3 409 aaPredicted RBP17.7■□□□□ 0.42
DHFR-201ENST00000439211 KIF9Q9HAQ2 790 aa17.7■□□□□ 0.42
DHFR-201ENST00000439211 IPO7O95373 1038 aaKnown RBP17.7■□□□□ 0.42
DHFR-201ENST00000439211 IGHMBP2P38935 993 aaKnown RBP17.7■□□□□ 0.42
DHFR-201ENST00000439211 CRYMQ14894 314 aa17.7■□□□□ 0.42
DHFR-201ENST00000439211 HLFQ16534 295 aa17.7■□□□□ 0.42
DHFR-201ENST00000439211 CCDC40Q4G0X9 1142 aa17.7■□□□□ 0.42
DHFR-201ENST00000439211 TOGARAM2Q6ZUX3 1019 aa17.7■□□□□ 0.42
DHFR-201ENST00000439211 TBC1D31Q96DN5 1066 aa17.7■□□□□ 0.42
DHFR-201ENST00000439211 PRDM1O75626 825 aa17.7■□□□□ 0.42
DHFR-201ENST00000439211 IRAK1P51617 712 aa17.7■□□□□ 0.42
DHFR-201ENST00000439211 KCNV1Q6PIU1 500 aa17.7■□□□□ 0.42
DHFR-201ENST00000439211 KRT23Q9C075 422 aa17.7■□□□□ 0.42
DHFR-201ENST00000439211 ZSWIM5Q9P217 1185 aa17.7■□□□□ 0.42
DHFR-201ENST00000439211 MEGF6O75095 1541 aa17.7■□□□□ 0.42
DHFR-201ENST00000439211 CYP7A1P22680 504 aa17.69■□□□□ 0.42
DHFR-201ENST00000439211 IFT88Q13099 833 aa17.69■□□□□ 0.42
DHFR-201ENST00000439211 PPFIA1Q13136 1202 aa17.69■□□□□ 0.42
DHFR-201ENST00000439211 NR5A1Q13285 461 aa17.69■□□□□ 0.42
DHFR-201ENST00000439211 POSTNQ15063 836 aa17.69■□□□□ 0.42
DHFR-201ENST00000439211 TSR1Q2NL82 804 aaKnown RBP17.69■□□□□ 0.42
DHFR-201ENST00000439211 SHC4Q6S5L8 630 aa17.69■□□□□ 0.42
DHFR-201ENST00000439211 NBPF5PQ86XG9 351 aaPredicted RBP17.69■□□□□ 0.42
DHFR-201ENST00000439211 NOSTRINQ8IVI9 506 aa17.69■□□□□ 0.42
DHFR-201ENST00000439211 ZBTB10Q96DT7 871 aa17.69■□□□□ 0.42
DHFR-201ENST00000439211 PCMTD1Q96MG8 357 aaPredicted RBP17.69■□□□□ 0.42
DHFR-201ENST00000439211 C1orf167Q5SNV9 1468 aa17.69■□□□□ 0.42
DHFR-201ENST00000439211 PRKAB2O43741 272 aa17.69■□□□□ 0.42
DHFR-201ENST00000439211 FCHSD1Q86WN1 690 aa17.69■□□□□ 0.42
DHFR-201ENST00000439211 DZIP3Q86Y13 1208 aaKnown RBP17.69■□□□□ 0.42
DHFR-201ENST00000439211 IFNL3Q8IZI9 196 aa17.69■□□□□ 0.42
DHFR-201ENST00000439211 ZNF513Q8N8E2 541 aaPredicted RBP17.69■□□□□ 0.42
DHFR-201ENST00000439211 ZKSCAN4Q969J2 545 aaPredicted RBP17.69■□□□□ 0.42
DHFR-201ENST00000439211 SAAL1Q96ER3 474 aa17.69■□□□□ 0.42
DHFR-201ENST00000439211 BAIAP2L1Q9UHR4 511 aa17.69■□□□□ 0.42
DHFR-201ENST00000439211 HNRNPLLQ8WVV9 542 aaKnown RBP17.69■□□□□ 0.42
DHFR-201ENST00000439211 AGXT2Q9BYV1 514 aa17.69■□□□□ 0.42
DHFR-201ENST00000439211 LRRIQ3A6PVS8 624 aaPredicted RBP17.68■□□□□ 0.42
DHFR-201ENST00000439211 SH2B2O14492 632 aaPredicted RBP17.68■□□□□ 0.42
DHFR-201ENST00000439211 CTSWP56202 376 aa17.68■□□□□ 0.42
DHFR-201ENST00000439211 EHD4Q9H223 541 aa17.68■□□□□ 0.42
DHFR-201ENST00000439211 CNNM2Q9H8M5 875 aa17.68■□□□□ 0.42
DHFR-201ENST00000439211 KCND1Q9NSA2 647 aa17.68■□□□□ 0.42
DHFR-201ENST00000439211 MROH7-TTC4A0A0A0MT08 1334 aa17.68■□□□□ 0.42
DHFR-201ENST00000439211 PDE8BO95263 885 aa17.68■□□□□ 0.42
DHFR-201ENST00000439211 GGCXP38435 758 aa17.68■□□□□ 0.42
DHFR-201ENST00000439211 SPATA5Q8NB90 893 aa17.68■□□□□ 0.42
DHFR-201ENST00000439211 NAPGQ99747 312 aaPredicted RBP17.68■□□□□ 0.42
DHFR-201ENST00000439211 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.68■□□□□ 0.429e-11■■□□□ 14.2
DHFR-201ENST00000439211 BUB1BO60566 1050 aaPredicted RBP17.68■□□□□ 0.42
DHFR-201ENST00000439211 AP1G2O75843 785 aa17.68■□□□□ 0.42
DHFR-201ENST00000439211 BICDL1Q6ZP65 573 aa17.68■□□□□ 0.42
DHFR-201ENST00000439211 LRP10Q7Z4F1 713 aa17.67■□□□□ 0.42
DHFR-201ENST00000439211 RPUSD2Q8IZ73 545 aaKnown RBP17.67■□□□□ 0.42
DHFR-201ENST00000439211 RIPOR2Q9Y4F9 1068 aa17.67■□□□□ 0.42
DHFR-201ENST00000439211 TTLL11Q8NHH1 800 aa17.67■□□□□ 0.42
DHFR-201ENST00000439211 TRIM75PA6NK02 468 aa17.67■□□□□ 0.42
DHFR-201ENST00000439211 IKBKBO14920 756 aa17.67■□□□□ 0.42
DHFR-201ENST00000439211 COBLO75128 1261 aa17.67■□□□□ 0.42
DHFR-201ENST00000439211 PUM3Q15397 648 aaKnown RBP17.67■□□□□ 0.42
DHFR-201ENST00000439211 AKNAD1Q5T1N1 836 aa17.67■□□□□ 0.42
DHFR-201ENST00000439211 RNF41Q9H4P4 317 aaPredicted RBP17.67■□□□□ 0.42
DHFR-201ENST00000439211 VPS54Q9P1Q0 977 aa17.67■□□□□ 0.42
DHFR-201ENST00000439211 NEDD4P46934 1319 aa17.67■□□□□ 0.42
DHFR-201ENST00000439211 OPA1O60313 960 aa17.66■□□□□ 0.42
DHFR-201ENST00000439211 SF3B2Q13435 895 aaKnown RBP17.66■□□□□ 0.42
DHFR-201ENST00000439211 RILPL1Q5EBL4 403 aa17.66■□□□□ 0.42
DHFR-201ENST00000439211 NUTM2AQ8IVF1 878 aaPredicted RBP17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms