RNA–Protein interactions for RNA: ENST00000438862.6

CSTF3-203, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 1 (best) BASIC

Gene CSTF3, Length 1,132 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-203ENST00000438862 RFX5P48382 616 aaPredicted RBP13.81□□□□□ -0.2
CSTF3-203ENST00000438862 EPHB4P54760 987 aa13.81□□□□□ -0.2
CSTF3-203ENST00000438862 LSM11P83369 360 aaKnown RBP eCLIP13.81□□□□□ -0.2
CSTF3-203ENST00000438862 TLE2Q04725 743 aa13.81□□□□□ -0.2
CSTF3-203ENST00000438862 FPGSQ05932 587 aa13.81□□□□□ -0.2
CSTF3-203ENST00000438862 WDR78Q5VTH9 848 aa13.81□□□□□ -0.2
CSTF3-203ENST00000438862 ERICH6Q7L0X2 663 aa13.81□□□□□ -0.2
CSTF3-203ENST00000438862 WDR63Q8IWG1 891 aa13.81□□□□□ -0.2
CSTF3-203ENST00000438862 DHX36Q9H2U1 1008 aaKnown RBP13.81□□□□□ -0.2
CSTF3-203ENST00000438862 KIAA0355O15063 1070 aa13.8□□□□□ -0.2
CSTF3-203ENST00000438862 SEPT4O43236 478 aa13.8□□□□□ -0.2
CSTF3-203ENST00000438862 PPP1R37O75864 691 aa13.8□□□□□ -0.2
CSTF3-203ENST00000438862 CIAO1O76071 339 aa13.8□□□□□ -0.2
CSTF3-203ENST00000438862 ITGB8P26012 769 aa13.8□□□□□ -0.2
CSTF3-203ENST00000438862 GSTO1P78417 241 aa13.8□□□□□ -0.2
CSTF3-203ENST00000438862 MECOMQ03112 1051 aa13.8□□□□□ -0.2
CSTF3-203ENST00000438862 GRB14Q14449 540 aa13.8□□□□□ -0.2
CSTF3-203ENST00000438862 OLFML2BQ68BL8 750 aa13.8□□□□□ -0.2
CSTF3-203ENST00000438862 CCDC102BQ68D86 513 aa13.8□□□□□ -0.2
CSTF3-203ENST00000438862 USP17L2Q6R6M4 530 aa13.8□□□□□ -0.2
CSTF3-203ENST00000438862 NPLOC4Q8TAT6 608 aa13.8□□□□□ -0.2
CSTF3-203ENST00000438862 NDUFB9Q9Y6M9 179 aa13.8□□□□□ -0.2
CSTF3-203ENST00000438862 USP17L15C9J2P7 530 aa13.79□□□□□ -0.2
CSTF3-203ENST00000438862 USP17L13C9JLJ4 530 aa13.79□□□□□ -0.2
CSTF3-203ENST00000438862 USP17L11C9JVI0 530 aa13.79□□□□□ -0.2
CSTF3-203ENST00000438862 USP17L18D6R9N7 530 aa13.79□□□□□ -0.2
CSTF3-203ENST00000438862 USP17L22D6RA61 530 aa13.79□□□□□ -0.2
CSTF3-203ENST00000438862 USP17L17D6RBQ6 530 aa13.79□□□□□ -0.2
CSTF3-203ENST00000438862 USP17L19D6RCP7 530 aa13.79□□□□□ -0.2
CSTF3-203ENST00000438862 USP17L20D6RJB6 530 aa13.79□□□□□ -0.2
CSTF3-203ENST00000438862 CNMDO75829 334 aa13.79□□□□□ -0.2
CSTF3-203ENST00000438862 USP17L24Q0WX57 530 aa13.79□□□□□ -0.2
CSTF3-203ENST00000438862 LRRC41Q15345 812 aa13.79□□□□□ -0.2
CSTF3-203ENST00000438862 DPP9Q86TI2 863 aa13.79□□□□□ -0.2
CSTF3-203ENST00000438862 FOXP4Q8IVH2 680 aaPredicted RBP13.79□□□□□ -0.2
CSTF3-203ENST00000438862 FERMT2Q96AC1 680 aa13.79□□□□□ -0.2
CSTF3-203ENST00000438862 EMILIN3Q9NT22 766 aa13.79□□□□□ -0.2
CSTF3-203ENST00000438862 LHX6Q9UPM6 363 aa13.79□□□□□ -0.2
CSTF3-203ENST00000438862 PCDHGA4Q9Y5G9 962 aa13.79□□□□□ -0.2
CSTF3-203ENST00000438862 STRNO43815 780 aa13.78□□□□□ -0.2
CSTF3-203ENST00000438862 RASGRF1Q13972 1273 aa13.78□□□□□ -0.2
CSTF3-203ENST00000438862 LBX2Q6XYB7 198 aa13.78□□□□□ -0.2
CSTF3-203ENST00000438862 LRFN3Q9BTN0 628 aa13.78□□□□□ -0.2
CSTF3-203ENST00000438862 USP44Q9H0E7 712 aa13.78□□□□□ -0.2
CSTF3-203ENST00000438862 PRDM12Q9H4Q4 367 aa13.78□□□□□ -0.2
CSTF3-203ENST00000438862 BMP1P13497 986 aa13.77□□□□□ -0.21
CSTF3-203ENST00000438862 IL15P40933 162 aaPredicted RBP13.77□□□□□ -0.21
CSTF3-203ENST00000438862 JAG1P78504 1218 aa13.77□□□□□ -0.21
CSTF3-203ENST00000438862 MYO9BQ13459 2157 aa13.77□□□□□ -0.21
CSTF3-203ENST00000438862 CCDC85BQ15834 202 aaPredicted RBP13.77□□□□□ -0.21
CSTF3-203ENST00000438862 AAK1Q2M2I8 961 aa13.77□□□□□ -0.21
CSTF3-203ENST00000438862 ANO1Q5XXA6 986 aa13.77□□□□□ -0.21
CSTF3-203ENST00000438862 CCDC174Q6PII3 467 aa13.77□□□□□ -0.21
CSTF3-203ENST00000438862 METTL16Q86W50 562 aaKnown RBP13.77□□□□□ -0.21
CSTF3-203ENST00000438862 TEX11Q8IYF3 940 aa13.77□□□□□ -0.21
CSTF3-203ENST00000438862 C12orf42Q96LP6 360 aa13.77□□□□□ -0.21
CSTF3-203ENST00000438862 TRIM34Q9BYJ4 488 aa13.77□□□□□ -0.21
CSTF3-203ENST00000438862 TMEM39AQ9NV64 488 aa13.77□□□□□ -0.21
CSTF3-203ENST00000438862 SLC5A4Q9NY91 659 aa13.77□□□□□ -0.21
CSTF3-203ENST00000438862 CXXC1Q9P0U4 656 aaPredicted RBP13.77□□□□□ -0.21
CSTF3-203ENST00000438862 PHF24Q9UPV7 400 aa13.77□□□□□ -0.21
CSTF3-203ENST00000438862 CATSPERGQ6ZRH7 1159 aa13.76□□□□□ -0.21
CSTF3-203ENST00000438862 CCDC129Q6ZRS4 1044 aa13.76□□□□□ -0.21
CSTF3-203ENST00000438862 CRACR2BQ8N4Y2 399 aaPredicted RBP13.76□□□□□ -0.21
CSTF3-203ENST00000438862 ZNF384Q8TF68 577 aa13.76□□□□□ -0.21
CSTF3-203ENST00000438862 NSUN4Q96CB9 384 aaKnown RBP13.76□□□□□ -0.21
CSTF3-203ENST00000438862 TOX2Q96NM4 488 aa13.76□□□□□ -0.21
CSTF3-203ENST00000438862 PBX4Q9BYU1 374 aa13.76□□□□□ -0.21
CSTF3-203ENST00000438862 SIL1Q9H173 461 aa13.76□□□□□ -0.21
CSTF3-203ENST00000438862 ZBTB21Q9ULJ3 1066 aa13.76□□□□□ -0.21
CSTF3-203ENST00000438862 TCF20Q9UGU0 1960 aaKnown RBP13.76□□□□□ -0.21
CSTF3-203ENST00000438862 IGFBP4P22692 258 aa13.75□□□□□ -0.21
CSTF3-203ENST00000438862 ADORA1P30542 326 aa13.75□□□□□ -0.21
CSTF3-203ENST00000438862 USP14P54578 494 aa13.75□□□□□ -0.21
CSTF3-203ENST00000438862 SLC44A5Q8NCS7 719 aa13.75□□□□□ -0.21
CSTF3-203ENST00000438862 NOL10Q9BSC4 688 aaKnown RBP13.75□□□□□ -0.21
CSTF3-203ENST00000438862 PLXNA1Q9UIW2 1896 aa13.75□□□□□ -0.21
CSTF3-203ENST00000438862 DCDC2CA8MYV0 355 aa13.74□□□□□ -0.21
CSTF3-203ENST00000438862 PQBP1O60828 265 aaKnown RBP13.74□□□□□ -0.21
CSTF3-203ENST00000438862 GDF11O95390 407 aa13.74□□□□□ -0.21
CSTF3-203ENST00000438862 TIMP1P01033 207 aa13.74□□□□□ -0.21
CSTF3-203ENST00000438862 ADORA2AP29274 412 aa13.74□□□□□ -0.21
CSTF3-203ENST00000438862 ADGRE1Q14246 886 aa13.74□□□□□ -0.21
CSTF3-203ENST00000438862 TMEM31Q5JXX7 168 aa13.74□□□□□ -0.21
CSTF3-203ENST00000438862 ANKRD33Q7Z3H0 272 aa13.74□□□□□ -0.21
CSTF3-203ENST00000438862 RNF180Q86T96 592 aa13.74□□□□□ -0.21
CSTF3-203ENST00000438862 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.74□□□□□ -0.21
CSTF3-203ENST00000438862 BTBD7Q9P203 1132 aa13.74□□□□□ -0.21
CSTF3-203ENST00000438862 MSRAQ9UJ68 235 aa13.74□□□□□ -0.21
CSTF3-203ENST00000438862 BAG3O95817 575 aa13.73□□□□□ -0.21
CSTF3-203ENST00000438862 RARBP10826 455 aa13.73□□□□□ -0.21
CSTF3-203ENST00000438862 PBX2P40425 430 aa13.73□□□□□ -0.21
CSTF3-203ENST00000438862 TIMM10P62072 90 aa13.73□□□□□ -0.21
CSTF3-203ENST00000438862 FAAP100Q0VG06 881 aa13.73□□□□□ -0.21
CSTF3-203ENST00000438862 PPIGQ13427 754 aaKnown RBP eCLIP13.73□□□□□ -0.211e-19■□□□□ 10.2
CSTF3-203ENST00000438862 MVPQ14764 893 aaKnown RBP13.73□□□□□ -0.21
CSTF3-203ENST00000438862 RAB30Q15771 203 aa13.73□□□□□ -0.21
CSTF3-203ENST00000438862 FAM47AQ5JRC9 791 aa13.73□□□□□ -0.21
CSTF3-203ENST00000438862 RASIP1Q5U651 963 aa13.73□□□□□ -0.21
CSTF3-203ENST00000438862 MFSD5Q6N075 450 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms