RNA–Protein interactions for RNA: ENST00000438510.5

HLA-DMB-259, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 663 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-259ENST00000438510 KIAA1683Q9H0B3 1180 aa12.39□□□□□ -0.43
HLA-DMB-259ENST00000438510 KAT14Q9H8E8 782 aa12.39□□□□□ -0.43
HLA-DMB-259ENST00000438510 CLIP2Q9UDT6 1046 aa12.39□□□□□ -0.43
HLA-DMB-259ENST00000438510 KCNH4Q9UQ05 1017 aa12.39□□□□□ -0.43
HLA-DMB-259ENST00000438510 TMX2Q9Y320 296 aa12.39□□□□□ -0.43
HLA-DMB-259ENST00000438510 CCDC69A6NI79 296 aa12.38□□□□□ -0.43
HLA-DMB-259ENST00000438510 IRF6O14896 467 aa12.38□□□□□ -0.43
HLA-DMB-259ENST00000438510 DSG3P32926 999 aa12.38□□□□□ -0.43
HLA-DMB-259ENST00000438510 LIFRP42702 1097 aa12.38□□□□□ -0.43
HLA-DMB-259ENST00000438510 GTF2A2P52657 109 aa12.38□□□□□ -0.43
HLA-DMB-259ENST00000438510 MTMR2Q13614 643 aa12.38□□□□□ -0.43
HLA-DMB-259ENST00000438510 ANKRD1Q15327 319 aa12.38□□□□□ -0.43
HLA-DMB-259ENST00000438510 SEC23AQ15436 765 aa12.38□□□□□ -0.43
HLA-DMB-259ENST00000438510 RCSD1Q6JBY9 416 aa12.38□□□□□ -0.43
HLA-DMB-259ENST00000438510 USP17L2Q6R6M4 530 aa12.38□□□□□ -0.43
HLA-DMB-259ENST00000438510 Q6ZUG5 572 aa12.38□□□□□ -0.43
HLA-DMB-259ENST00000438510 LRRC47Q8N1G4 583 aaKnown RBP12.38□□□□□ -0.43
HLA-DMB-259ENST00000438510 FBXL16Q8N461 479 aa12.38□□□□□ -0.43
HLA-DMB-259ENST00000438510 GMCL1P1Q8NEA9 526 aa12.38□□□□□ -0.43
HLA-DMB-259ENST00000438510 IGDCC4Q8TDY8 1250 aa12.38□□□□□ -0.43
HLA-DMB-259ENST00000438510 LPAR1Q92633 364 aa12.38□□□□□ -0.43
HLA-DMB-259ENST00000438510 TMEM47Q9BQJ4 181 aa12.38□□□□□ -0.43
HLA-DMB-259ENST00000438510 LY9Q9HBG7 655 aa12.38□□□□□ -0.43
HLA-DMB-259ENST00000438510 PDRG1Q9NUG6 133 aa12.38□□□□□ -0.43
HLA-DMB-259ENST00000438510 TMOD4Q9NZQ9 345 aa12.38□□□□□ -0.43
HLA-DMB-259ENST00000438510 MYH6P13533 1939 aa12.37□□□□□ -0.43
HLA-DMB-259ENST00000438510 A0A0G2JLL6 359 aaPredicted RBP12.37□□□□□ -0.43
HLA-DMB-259ENST00000438510 A0A1W2PRG0 241 aa12.37□□□□□ -0.43
HLA-DMB-259ENST00000438510 MANSC4A6NHS7 340 aaPredicted RBP12.37□□□□□ -0.43
HLA-DMB-259ENST00000438510 ST18O60284 1047 aa12.37□□□□□ -0.43
HLA-DMB-259ENST00000438510 CETPP11597 493 aa12.37□□□□□ -0.43
HLA-DMB-259ENST00000438510 CPA1P15085 419 aa12.37□□□□□ -0.43
HLA-DMB-259ENST00000438510 GJA5P36382 358 aa12.37□□□□□ -0.43
HLA-DMB-259ENST00000438510 NEK4P51957 841 aa12.37□□□□□ -0.43
HLA-DMB-259ENST00000438510 NOGQ13253 232 aa12.37□□□□□ -0.43
HLA-DMB-259ENST00000438510 SH3D19Q5HYK7 790 aa12.37□□□□□ -0.43
HLA-DMB-259ENST00000438510 NFXL1Q6ZNB6 911 aa12.37□□□□□ -0.43
HLA-DMB-259ENST00000438510 FASTKD5Q7L8L6 764 aaKnown RBP12.37□□□□□ -0.43
HLA-DMB-259ENST00000438510 PRRT2Q7Z6L0 340 aaPredicted RBP12.37□□□□□ -0.43
HLA-DMB-259ENST00000438510 CATIPQ7Z7H3 387 aa12.37□□□□□ -0.43
HLA-DMB-259ENST00000438510 SGMS1Q86VZ5 419 aa12.37□□□□□ -0.43
HLA-DMB-259ENST00000438510 SIAH1Q8IUQ4 282 aa12.37□□□□□ -0.43
HLA-DMB-259ENST00000438510 PROCA1Q8NCQ7 364 aaPredicted RBP12.37□□□□□ -0.43
HLA-DMB-259ENST00000438510 PNMA1Q8ND90 353 aa12.37□□□□□ -0.43
HLA-DMB-259ENST00000438510 ACER1Q8TDN7 264 aa12.37□□□□□ -0.43
HLA-DMB-259ENST00000438510 C12orf42Q96LP6 360 aa12.37□□□□□ -0.43
HLA-DMB-259ENST00000438510 TCEANC2Q96MN5 208 aa12.37□□□□□ -0.43
HLA-DMB-259ENST00000438510 KIF2CQ99661 725 aa12.37□□□□□ -0.43
HLA-DMB-259ENST00000438510 LRRC2Q9BYS8 371 aa12.37□□□□□ -0.43
HLA-DMB-259ENST00000438510 AGXT2Q9BYV1 514 aa12.37□□□□□ -0.43
HLA-DMB-259ENST00000438510 ALDH8A1Q9H2A2 487 aaPredicted RBP12.37□□□□□ -0.43
HLA-DMB-259ENST00000438510 VCPKMTQ9H867 229 aa12.37□□□□□ -0.43
HLA-DMB-259ENST00000438510 FAM155AB1AL88 458 aaPredicted RBP12.36□□□□□ -0.43
HLA-DMB-259ENST00000438510 F5H6K3 240 aa12.36□□□□□ -0.43
HLA-DMB-259ENST00000438510 RAD21O60216 631 aa12.36□□□□□ -0.43
HLA-DMB-259ENST00000438510 HMGCS2P54868 508 aa12.36□□□□□ -0.43
HLA-DMB-259ENST00000438510 KLRC3Q07444 240 aa12.36□□□□□ -0.43
HLA-DMB-259ENST00000438510 SREBF2Q12772 1141 aa12.36□□□□□ -0.43
HLA-DMB-259ENST00000438510 MKRN3Q13064 507 aaKnown RBP12.36□□□□□ -0.43
HLA-DMB-259ENST00000438510 GRM1Q13255 1194 aa12.36□□□□□ -0.43
HLA-DMB-259ENST00000438510 COL9A3Q14050 684 aaPredicted RBP12.36□□□□□ -0.43
HLA-DMB-259ENST00000438510 ZYXQ15942 572 aaKnown RBP12.36□□□□□ -0.43
HLA-DMB-259ENST00000438510 CYP4F22Q6NT55 531 aa12.36□□□□□ -0.43
HLA-DMB-259ENST00000438510 SYNE3Q6ZMZ3 975 aa12.36□□□□□ -0.43
HLA-DMB-259ENST00000438510 CAPNS2Q96L46 248 aa12.36□□□□□ -0.43
HLA-DMB-259ENST00000438510 SLC12A7Q9Y666 1083 aa12.36□□□□□ -0.43
HLA-DMB-259ENST00000438510 CCL15-CCL14A0A0B4J2E2 113 aa12.35□□□□□ -0.43
HLA-DMB-259ENST00000438510 WDR46O15213 610 aaKnown RBP12.35□□□□□ -0.43
HLA-DMB-259ENST00000438510 DDAH1O94760 285 aa12.35□□□□□ -0.43
HLA-DMB-259ENST00000438510 CALM1P0DP23 149 aa12.35□□□□□ -0.43
HLA-DMB-259ENST00000438510 CALM2P0DP24 149 aa12.35□□□□□ -0.43
HLA-DMB-259ENST00000438510 CALM3P0DP25 149 aa12.35□□□□□ -0.43
HLA-DMB-259ENST00000438510 RCAN1P53805 252 aa12.35□□□□□ -0.43
HLA-DMB-259ENST00000438510 INHBEP58166 350 aa12.35□□□□□ -0.43
HLA-DMB-259ENST00000438510 PABPC4Q13310 644 aaKnown RBP eCLIP12.35□□□□□ -0.43
HLA-DMB-259ENST00000438510 CCL15Q16663 113 aa12.35□□□□□ -0.43
HLA-DMB-259ENST00000438510 SLFN13Q68D06 897 aa12.35□□□□□ -0.43
HLA-DMB-259ENST00000438510 GADL1Q6ZQY3 521 aa12.35□□□□□ -0.43
HLA-DMB-259ENST00000438510 REM2Q8IYK8 340 aaPredicted RBP12.35□□□□□ -0.43
HLA-DMB-259ENST00000438510 ZNF654Q8IZM8 581 aa12.35□□□□□ -0.43
HLA-DMB-259ENST00000438510 DCAF4Q8WV16 495 aa12.35□□□□□ -0.43
HLA-DMB-259ENST00000438510 BRF1Q92994 677 aa12.35□□□□□ -0.43
HLA-DMB-259ENST00000438510 GMCL1Q96IK5 515 aa12.35□□□□□ -0.43
HLA-DMB-259ENST00000438510 RLFQ13129 1914 aa12.35□□□□□ -0.43
HLA-DMB-259ENST00000438510 COL11A1P12107 1806 aaPredicted RBP12.34□□□□□ -0.43
HLA-DMB-259ENST00000438510 A0A0G2JMZ2 1700 aa12.34□□□□□ -0.43
HLA-DMB-259ENST00000438510 KLF18A0A0U1RQI7 1052 aa12.34□□□□□ -0.43
HLA-DMB-259ENST00000438510 NDUFB10O96000 172 aa12.34□□□□□ -0.43
HLA-DMB-259ENST00000438510 VCAM1P19320 739 aa12.34□□□□□ -0.43
HLA-DMB-259ENST00000438510 SLC1A4P43007 532 aa12.34□□□□□ -0.43
HLA-DMB-259ENST00000438510 AK2P54819 239 aa12.34□□□□□ -0.43
HLA-DMB-259ENST00000438510 APOA5Q6Q788 366 aa12.34□□□□□ -0.43
HLA-DMB-259ENST00000438510 MS4A4AQ96JQ5 239 aa12.34□□□□□ -0.43
HLA-DMB-259ENST00000438510 MAP3K14Q99558 947 aa12.34□□□□□ -0.43
HLA-DMB-259ENST00000438510 GPHNQ9NQX3 736 aaPredicted RBP12.34□□□□□ -0.43
HLA-DMB-259ENST00000438510 EMILIN3Q9NT22 766 aa12.34□□□□□ -0.43
HLA-DMB-259ENST00000438510 WDR33Q9C0J8 1336 aaKnown RBP12.34□□□□□ -0.43
HLA-DMB-259ENST00000438510 TESPA1A2RU30 521 aaPredicted RBP12.33□□□□□ -0.44
HLA-DMB-259ENST00000438510 GOLGA8BA8MQT2 603 aa12.33□□□□□ -0.44
HLA-DMB-259ENST00000438510 ZBTB43O43298 467 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 133.8 ms