RNA–Protein interactions for RNA: ENST00000438092.6

SHPRH-206, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best) BASIC

Gene SHPRH, Length 6,994 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-206ENST00000438092 C8orf74Q6P047 294 aa11.46□□□□□ -0.57
SHPRH-206ENST00000438092 SKA2Q8WVK7 121 aaPredicted RBP11.46□□□□□ -0.57
SHPRH-206ENST00000438092 EEF2KMTQ96G04 330 aa11.46□□□□□ -0.57
SHPRH-206ENST00000438092 KRT81Q14533 505 aa11.46□□□□□ -0.58
SHPRH-206ENST00000438092 REXO1Q8N1G1 1221 aaKnown RBP11.46□□□□□ -0.58
SHPRH-206ENST00000438092 PRAG1Q86YV5 1406 aa11.46□□□□□ -0.58
SHPRH-206ENST00000438092 VPS41P49754 854 aa11.46□□□□□ -0.58
SHPRH-206ENST00000438092 GKAP1Q5VSY0 366 aaPredicted RBP11.46□□□□□ -0.58
SHPRH-206ENST00000438092 OTUD6AQ7L8S5 288 aa11.46□□□□□ -0.58
SHPRH-206ENST00000438092 GPBP1Q86WP2 473 aa11.46□□□□□ -0.58
SHPRH-206ENST00000438092 LSM14BQ9BX40 385 aaKnown RBP11.46□□□□□ -0.58
SHPRH-206ENST00000438092 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.46□□□□□ -0.58
SHPRH-206ENST00000438092 TACC3Q9Y6A5 838 aa11.46□□□□□ -0.58
SHPRH-206ENST00000438092 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.46□□□□□ -0.58
SHPRH-206ENST00000438092 EVCP57679 992 aa11.45□□□□□ -0.58
SHPRH-206ENST00000438092 CYP26C1Q6V0L0 522 aa11.45□□□□□ -0.58
SHPRH-206ENST00000438092 LIG4P49917 911 aa11.45□□□□□ -0.58
SHPRH-206ENST00000438092 FANCCQ00597 558 aa11.45□□□□□ -0.58
SHPRH-206ENST00000438092 RRAGAQ7L523 313 aa11.45□□□□□ -0.58
SHPRH-206ENST00000438092 NBPF3Q9H094 633 aa11.45□□□□□ -0.58
SHPRH-206ENST00000438092 POSTNQ15063 836 aa11.45□□□□□ -0.58
SHPRH-206ENST00000438092 CCDC105Q8IYK2 499 aa11.45□□□□□ -0.58
SHPRH-206ENST00000438092 DCLK2Q8N568 766 aa11.45□□□□□ -0.58
SHPRH-206ENST00000438092 GDAP1L1Q96MZ0 367 aa11.45□□□□□ -0.58
SHPRH-206ENST00000438092 AS3MTQ9HBK9 375 aa11.45□□□□□ -0.58
SHPRH-206ENST00000438092 MKRN1Q9UHC7 482 aaKnown RBP11.45□□□□□ -0.58
SHPRH-206ENST00000438092 E7EWF7 191 aa11.45□□□□□ -0.58
SHPRH-206ENST00000438092 SLC4A1P02730 911 aa11.45□□□□□ -0.58
SHPRH-206ENST00000438092 USPL1Q5W0Q7 1092 aa11.45□□□□□ -0.58
SHPRH-206ENST00000438092 KAZNQ674X7 775 aa11.45□□□□□ -0.58
SHPRH-206ENST00000438092 KRT25Q7Z3Z0 450 aa11.45□□□□□ -0.58
SHPRH-206ENST00000438092 CD2APQ9Y5K6 639 aa11.45□□□□□ -0.58
SHPRH-206ENST00000438092 PALM3A6NDB9 673 aaPredicted RBP11.45□□□□□ -0.58
SHPRH-206ENST00000438092 U2AF2P26368 475 aaKnown RBP eCLIP11.45□□□□□ -0.586e-7■■■■□ 20
SHPRH-206ENST00000438092 KLHL30Q0D2K2 578 aa11.45□□□□□ -0.58
SHPRH-206ENST00000438092 MTX1Q13505 466 aa11.45□□□□□ -0.58
SHPRH-206ENST00000438092 KRT40Q6A162 431 aa11.45□□□□□ -0.58
SHPRH-206ENST00000438092 SDCCAG8Q86SQ7 713 aaPredicted RBP11.45□□□□□ -0.58
SHPRH-206ENST00000438092 HINFPQ9BQA5 517 aa11.45□□□□□ -0.58
SHPRH-206ENST00000438092 DBNDD1Q9H9R9 158 aa11.45□□□□□ -0.58
SHPRH-206ENST00000438092 LRRIQ4A6NIV6 560 aa11.44□□□□□ -0.58
SHPRH-206ENST00000438092 NOL3O60936 208 aaKnown RBP11.44□□□□□ -0.58
SHPRH-206ENST00000438092 GADD45BO75293 160 aaPredicted RBP11.44□□□□□ -0.58
SHPRH-206ENST00000438092 IL13P35225 146 aa11.44□□□□□ -0.58
SHPRH-206ENST00000438092 BTDP43251 543 aa11.44□□□□□ -0.58
SHPRH-206ENST00000438092 VWA3BQ502W6 1294 aa11.44□□□□□ -0.58
SHPRH-206ENST00000438092 EEPD1Q7L9B9 569 aa11.44□□□□□ -0.58
SHPRH-206ENST00000438092 DPP9Q86TI2 863 aa11.44□□□□□ -0.58
SHPRH-206ENST00000438092 KBTBD3Q8NAB2 608 aa11.44□□□□□ -0.58
SHPRH-206ENST00000438092 SLF1Q9BQI6 1058 aa11.44□□□□□ -0.58
SHPRH-206ENST00000438092 PSTPIP2Q9H939 334 aa11.44□□□□□ -0.58
SHPRH-206ENST00000438092 K7ENM7 598 aa11.44□□□□□ -0.58
SHPRH-206ENST00000438092 HACE1Q8IYU2 909 aa11.44□□□□□ -0.58
SHPRH-206ENST00000438092 FAM76AQ8TAV0 307 aa11.44□□□□□ -0.58
SHPRH-206ENST00000438092 NAPGQ99747 312 aaPredicted RBP11.44□□□□□ -0.58
SHPRH-206ENST00000438092 SLC9C1Q4G0N8 1177 aa11.44□□□□□ -0.58
SHPRH-206ENST00000438092 SNX21Q969T3 373 aa11.44□□□□□ -0.58
SHPRH-206ENST00000438092 RIOK3O14730 519 aaKnown RBP11.44□□□□□ -0.58
SHPRH-206ENST00000438092 BCRP11274 1271 aa11.44□□□□□ -0.58
SHPRH-206ENST00000438092 CYP4A11Q02928 519 aa11.44□□□□□ -0.58
SHPRH-206ENST00000438092 U2AF1L4Q8WU68 220 aaKnown RBP11.44□□□□□ -0.58
SHPRH-206ENST00000438092 ARPP19P56211 112 aa11.44□□□□□ -0.58
SHPRH-206ENST00000438092 CCDC127Q96BQ5 260 aa11.44□□□□□ -0.58
SHPRH-206ENST00000438092 KIF9Q9HAQ2 790 aa11.44□□□□□ -0.58
SHPRH-206ENST00000438092 STIM2Q9P246 746 aa11.44□□□□□ -0.58
SHPRH-206ENST00000438092 RAD50Q92878 1312 aa11.44□□□□□ -0.58
SHPRH-206ENST00000438092 NEURL1BA8MQ27 555 aa11.44□□□□□ -0.58
SHPRH-206ENST00000438092 LRRC24Q50LG9 513 aa11.44□□□□□ -0.58
SHPRH-206ENST00000438092 KDRP35968 1356 aa11.43□□□□□ -0.58
SHPRH-206ENST00000438092 CIB2O75838 187 aa11.43□□□□□ -0.58
SHPRH-206ENST00000438092 IFNB1P01574 187 aa11.43□□□□□ -0.58
SHPRH-206ENST00000438092 STMN2Q93045 179 aa11.43□□□□□ -0.58
SHPRH-206ENST00000438092 SERTAD1Q9UHV2 236 aa11.43□□□□□ -0.58
SHPRH-206ENST00000438092 IBTKQ9P2D0 1353 aaPredicted RBP11.43□□□□□ -0.58
SHPRH-206ENST00000438092 GOLGA6CA6NDK9 693 aa11.43□□□□□ -0.58
SHPRH-206ENST00000438092 GOLGA6BA6NDN3 693 aa11.43□□□□□ -0.58
SHPRH-206ENST00000438092 GOLGA6DP0CG33 693 aa11.43□□□□□ -0.58
SHPRH-206ENST00000438092 ARHGEF2Q92974 986 aaKnown RBP11.43□□□□□ -0.58
SHPRH-206ENST00000438092 SLC5A4Q9NY91 659 aa11.43□□□□□ -0.58
SHPRH-206ENST00000438092 GOLGA6AQ9NYA3 693 aa11.43□□□□□ -0.58
SHPRH-206ENST00000438092 CCPG1Q9ULG6 757 aa11.43□□□□□ -0.58
SHPRH-206ENST00000438092 BZW2Q9Y6E2 419 aaKnown RBP11.43□□□□□ -0.58
SHPRH-206ENST00000438092 CUTAO60888 179 aa11.43□□□□□ -0.58
SHPRH-206ENST00000438092 GNPTABQ3T906 1256 aa11.43□□□□□ -0.58
SHPRH-206ENST00000438092 KCTD1Q719H9 257 aa11.43□□□□□ -0.58
SHPRH-206ENST00000438092 TTC30BQ8N4P2 665 aa11.43□□□□□ -0.58
SHPRH-206ENST00000438092 CHURC1Q8WUH1 139 aa11.43□□□□□ -0.58
SHPRH-206ENST00000438092 VPS37BQ9H9H4 285 aa11.43□□□□□ -0.58
SHPRH-206ENST00000438092 POLGP54098 1239 aaPredicted RBP11.43□□□□□ -0.58
SHPRH-206ENST00000438092 CTAGE3PQ8IX95 158 aa11.43□□□□□ -0.58
SHPRH-206ENST00000438092 SECISBP2LQ93073 1101 aaKnown RBP11.43□□□□□ -0.58
SHPRH-206ENST00000438092 ABT1Q9ULW3 272 aaKnown RBP11.43□□□□□ -0.58
SHPRH-206ENST00000438092 AKT3Q9Y243 479 aa11.43□□□□□ -0.58
SHPRH-206ENST00000438092 ADKP55263 362 aaKnown RBP11.43□□□□□ -0.58
SHPRH-206ENST00000438092 ZNF654Q8IZM8 581 aa11.43□□□□□ -0.58
SHPRH-206ENST00000438092 RAD17O75943 681 aa11.42□□□□□ -0.58
SHPRH-206ENST00000438092 ATF7P17544 494 aaPredicted RBP11.42□□□□□ -0.58
SHPRH-206ENST00000438092 SFMBT2Q5VUG0 894 aa11.42□□□□□ -0.58
SHPRH-206ENST00000438092 NBPF11Q86T75 865 aa11.42□□□□□ -0.58
SHPRH-206ENST00000438092 RSAD2Q8WXG1 361 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms