RNA–Protein interactions for RNA: ENST00000437932.5

PDLIM5-206, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5 BASIC

Gene PDLIM5, Length 5,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-206ENST00000437932 TSGA10IPQ3SY00 556 aa13.12□□□□□ -0.31
PDLIM5-206ENST00000437932 IQCEQ6IPM2 695 aa13.12□□□□□ -0.31
PDLIM5-206ENST00000437932 USP17L1Q7RTZ2 530 aa13.12□□□□□ -0.31
PDLIM5-206ENST00000437932 TEX11Q8IYF3 940 aa13.12□□□□□ -0.31
PDLIM5-206ENST00000437932 RTCBQ9Y3I0 505 aaKnown RBP13.12□□□□□ -0.31
PDLIM5-206ENST00000437932 PALLDQ8WX93 1383 aa13.11□□□□□ -0.31
PDLIM5-206ENST00000437932 TPTE2Q6XPS3 522 aa13.11□□□□□ -0.31
PDLIM5-206ENST00000437932 IFT81Q8WYA0 676 aa13.11□□□□□ -0.31
PDLIM5-206ENST00000437932 C1orf167Q5SNV9 1468 aa13.11□□□□□ -0.31
PDLIM5-206ENST00000437932 CLCN6P51797 869 aa13.11□□□□□ -0.31
PDLIM5-206ENST00000437932 MTF1Q14872 753 aa13.11□□□□□ -0.31
PDLIM5-206ENST00000437932 NELFCDQ8IXH7 590 aa13.11□□□□□ -0.31
PDLIM5-206ENST00000437932 TIGD1Q96MW7 591 aa13.11□□□□□ -0.31
PDLIM5-206ENST00000437932 C6orf50Q9HD87 102 aa13.11□□□□□ -0.31
PDLIM5-206ENST00000437932 FAM207AQ9NSI2 230 aaPredicted RBP13.11□□□□□ -0.31
PDLIM5-206ENST00000437932 LOC102724428A0A0B4J2F2 783 aa13.11□□□□□ -0.31
PDLIM5-206ENST00000437932 ARID4AP29374 1257 aaPredicted RBP13.11□□□□□ -0.31
PDLIM5-206ENST00000437932 SIK1P57059 783 aa13.11□□□□□ -0.31
PDLIM5-206ENST00000437932 TBC1D8BQ0IIM8 1120 aa13.11□□□□□ -0.31
PDLIM5-206ENST00000437932 VSTM4Q8IW00 320 aa13.11□□□□□ -0.31
PDLIM5-206ENST00000437932 ALDH8A1Q9H2A2 487 aaPredicted RBP13.11□□□□□ -0.31
PDLIM5-206ENST00000437932 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.11□□□□□ -0.312e-6■■■■■ 86.5
PDLIM5-206ENST00000437932 TYW1BQ6NUM6 668 aa13.11□□□□□ -0.31
PDLIM5-206ENST00000437932 SMARCC1Q92922 1105 aaPredicted RBP13.11□□□□□ -0.31
PDLIM5-206ENST00000437932 PKD2L1Q9P0L9 805 aa13.11□□□□□ -0.31
PDLIM5-206ENST00000437932 BMP15O95972 392 aa13.1□□□□□ -0.31
PDLIM5-206ENST00000437932 GSTO1P78417 241 aa13.1□□□□□ -0.31
PDLIM5-206ENST00000437932 HLTFQ14527 1009 aaKnown RBP eCLIP13.1□□□□□ -0.31
PDLIM5-206ENST00000437932 PARP10Q53GL7 1025 aa13.1□□□□□ -0.31
PDLIM5-206ENST00000437932 METTL16Q86W50 562 aaKnown RBP13.1□□□□□ -0.31
PDLIM5-206ENST00000437932 LRRC47Q8N1G4 583 aaKnown RBP13.1□□□□□ -0.31
PDLIM5-206ENST00000437932 JAKMIP2Q96AA8 810 aa13.1□□□□□ -0.31
PDLIM5-206ENST00000437932 PAGE5Q96GU1 130 aa13.1□□□□□ -0.31
PDLIM5-206ENST00000437932 CCDC42Q96M95 316 aa13.1□□□□□ -0.31
PDLIM5-206ENST00000437932 CALCOCO1Q9P1Z2 691 aa13.1□□□□□ -0.31
PDLIM5-206ENST00000437932 ETF1P62495 437 aaKnown RBP13.1□□□□□ -0.31
PDLIM5-206ENST00000437932 ALS2CR12Q96Q35 445 aa13.1□□□□□ -0.31
PDLIM5-206ENST00000437932 TRIM49BA6NDI0 452 aa13.1□□□□□ -0.31
PDLIM5-206ENST00000437932 TCP10Q12799 353 aa13.1□□□□□ -0.31
PDLIM5-206ENST00000437932 CUL4BQ13620 913 aa13.1□□□□□ -0.31
PDLIM5-206ENST00000437932 FAM114A1Q8IWE2 563 aa13.1□□□□□ -0.31
PDLIM5-206ENST00000437932 ISCA1Q9BUE6 129 aa13.1□□□□□ -0.31
PDLIM5-206ENST00000437932 GBP3Q9H0R5 595 aa13.1□□□□□ -0.31
PDLIM5-206ENST00000437932 CCNL1Q9UK58 526 aaPredicted RBP13.1□□□□□ -0.31
PDLIM5-206ENST00000437932 TEX33O43247 280 aa13.1□□□□□ -0.31
PDLIM5-206ENST00000437932 CYLC1P35663 651 aaPredicted RBP13.1□□□□□ -0.31
PDLIM5-206ENST00000437932 FMR1Q06787 632 aaKnown RBP eCLIP13.1□□□□□ -0.313e-9■■■■■ 33
PDLIM5-206ENST00000437932 CABP7Q86V35 215 aa13.1□□□□□ -0.31
PDLIM5-206ENST00000437932 B4DLN1 442 aa13.1□□□□□ -0.31
PDLIM5-206ENST00000437932 MAATS1Q7Z4T9 603 aa13.1□□□□□ -0.31
PDLIM5-206ENST00000437932 SLC39A2Q9NP94 309 aa13.1□□□□□ -0.31
PDLIM5-206ENST00000437932 RPN1P04843 607 aaKnown RBP13.09□□□□□ -0.31
PDLIM5-206ENST00000437932 CALML3P27482 149 aa13.09□□□□□ -0.31
PDLIM5-206ENST00000437932 USP8P40818 1118 aa13.09□□□□□ -0.31
PDLIM5-206ENST00000437932 DIXDC1Q155Q3 683 aa13.09□□□□□ -0.31
PDLIM5-206ENST00000437932 SARM1Q6SZW1 724 aa13.09□□□□□ -0.31
PDLIM5-206ENST00000437932 GOLGA6L10A6NI86 522 aa13.09□□□□□ -0.31
PDLIM5-206ENST00000437932 ILDR1Q86SU0 546 aaPredicted RBP13.09□□□□□ -0.31
PDLIM5-206ENST00000437932 SLC35F6Q8N357 371 aa13.09□□□□□ -0.31
PDLIM5-206ENST00000437932 EPB41L4AQ9HCS5 686 aaPredicted RBP13.09□□□□□ -0.31
PDLIM5-206ENST00000437932 RIPOR2Q9Y4F9 1068 aa13.09□□□□□ -0.31
PDLIM5-206ENST00000437932 SCG2P13521 617 aa13.09□□□□□ -0.31
PDLIM5-206ENST00000437932 ST5P78524 1137 aa13.09□□□□□ -0.31
PDLIM5-206ENST00000437932 CACNB1Q02641 598 aaPredicted RBP13.09□□□□□ -0.31
PDLIM5-206ENST00000437932 MECOMQ03112 1051 aa13.09□□□□□ -0.31
PDLIM5-206ENST00000437932 BLIDQ8IZY5 108 aa13.09□□□□□ -0.31
PDLIM5-206ENST00000437932 SF3A3Q12874 501 aaKnown RBP eCLIP13.09□□□□□ -0.31
PDLIM5-206ENST00000437932 C10orf67Q8IYJ2 551 aa13.09□□□□□ -0.31
PDLIM5-206ENST00000437932 IRX2Q9BZI1 471 aaPredicted RBP13.09□□□□□ -0.31
PDLIM5-206ENST00000437932 TNS3Q68CZ2 1445 aa13.09□□□□□ -0.31
PDLIM5-206ENST00000437932 PIK3C2AO00443 1686 aa13.09□□□□□ -0.31
PDLIM5-206ENST00000437932 GSG1L2A8MUP6 293 aa13.08□□□□□ -0.31
PDLIM5-206ENST00000437932 CHMP2AO43633 222 aa13.08□□□□□ -0.31
PDLIM5-206ENST00000437932 CYP19A1P11511 503 aaPredicted RBP13.08□□□□□ -0.31
PDLIM5-206ENST00000437932 SYCP1Q15431 976 aa13.08□□□□□ -0.31
PDLIM5-206ENST00000437932 MAP9Q49MG5 647 aa13.08□□□□□ -0.31
PDLIM5-206ENST00000437932 DCAF17Q5H9S7 520 aaPredicted RBP13.08□□□□□ -0.31
PDLIM5-206ENST00000437932 TTC19Q6DKK2 380 aaPredicted RBP13.08□□□□□ -0.31
PDLIM5-206ENST00000437932 NCAPH2Q6IBW4 605 aa13.08□□□□□ -0.31
PDLIM5-206ENST00000437932 USP49Q70CQ1 688 aa13.08□□□□□ -0.31
PDLIM5-206ENST00000437932 TAX1BP1Q86VP1 789 aa13.08□□□□□ -0.31
PDLIM5-206ENST00000437932 NYXQ9GZU5 481 aa13.08□□□□□ -0.31
PDLIM5-206ENST00000437932 CCDC113Q9H0I3 377 aa13.08□□□□□ -0.31
PDLIM5-206ENST00000437932 UBR1Q8IWV7 1749 aa13.08□□□□□ -0.32
PDLIM5-206ENST00000437932 PP2D1A8MPX8 630 aa13.08□□□□□ -0.32
PDLIM5-206ENST00000437932 TMEM110-MUSTN1A8MSY1 372 aa13.08□□□□□ -0.32
PDLIM5-206ENST00000437932 RAB34Q9BZG1 259 aa13.08□□□□□ -0.32
PDLIM5-206ENST00000437932 POTEB2H3BUK9 544 aa13.08□□□□□ -0.32
PDLIM5-206ENST00000437932 BUB1O43683 1085 aa13.08□□□□□ -0.32
PDLIM5-206ENST00000437932 ATP2C2O75185 946 aa13.08□□□□□ -0.32
PDLIM5-206ENST00000437932 SMC1AQ14683 1233 aaKnown RBP13.08□□□□□ -0.32
PDLIM5-206ENST00000437932 USH1GQ495M9 461 aa13.08□□□□□ -0.32
PDLIM5-206ENST00000437932 PNMA1Q8ND90 353 aa13.08□□□□□ -0.32
PDLIM5-206ENST00000437932 LRRN4CLQ8ND94 238 aa13.08□□□□□ -0.32
PDLIM5-206ENST00000437932 KCNB2Q92953 911 aa13.08□□□□□ -0.32
PDLIM5-206ENST00000437932 SMCO2A6NFE2 343 aa13.08□□□□□ -0.32
PDLIM5-206ENST00000437932 KIF5AQ12840 1032 aa13.08□□□□□ -0.32
PDLIM5-206ENST00000437932 E4F1Q66K89 784 aaPredicted RBP13.08□□□□□ -0.32
PDLIM5-206ENST00000437932 FOXP1Q9H334 677 aaPredicted RBP13.08□□□□□ -0.32
PDLIM5-206ENST00000437932 GDAQ9Y2T3 454 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms