RNA–Protein interactions for RNA: ENST00000437681.1

SNHG3-202, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 2 BASIC

Gene SNHG3, Length 2,614 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-202ENST00000437681 USP17L13C9JLJ4 530 aa13.51□□□□□ -0.25
SNHG3-202ENST00000437681 USP17L11C9JVI0 530 aa13.51□□□□□ -0.25
SNHG3-202ENST00000437681 USP17L18D6R9N7 530 aa13.51□□□□□ -0.25
SNHG3-202ENST00000437681 USP17L22D6RA61 530 aa13.51□□□□□ -0.25
SNHG3-202ENST00000437681 USP17L17D6RBQ6 530 aa13.51□□□□□ -0.25
SNHG3-202ENST00000437681 USP17L19D6RCP7 530 aa13.51□□□□□ -0.25
SNHG3-202ENST00000437681 USP17L20D6RJB6 530 aa13.51□□□□□ -0.25
SNHG3-202ENST00000437681 COPB2P35606 906 aa13.51□□□□□ -0.25
SNHG3-202ENST00000437681 USP17L24Q0WX57 530 aa13.51□□□□□ -0.25
SNHG3-202ENST00000437681 RALYLQ86SE5 291 aaKnown RBP13.51□□□□□ -0.25
SNHG3-202ENST00000437681 MB21D2Q8IYB1 491 aaPredicted RBP13.51□□□□□ -0.25
SNHG3-202ENST00000437681 MB21D1Q8N884 522 aa13.51□□□□□ -0.25
SNHG3-202ENST00000437681 BRI3BPQ8WY22 251 aa13.51□□□□□ -0.25
SNHG3-202ENST00000437681 GDF11O95390 407 aa13.51□□□□□ -0.25
SNHG3-202ENST00000437681 GNRH1P01148 92 aa13.51□□□□□ -0.25
SNHG3-202ENST00000437681 SIAH1Q8IUQ4 282 aa13.51□□□□□ -0.25
SNHG3-202ENST00000437681 TEX2Q8IWB9 1127 aa13.51□□□□□ -0.25
SNHG3-202ENST00000437681 SLC44A5Q8NCS7 719 aa13.51□□□□□ -0.25
SNHG3-202ENST00000437681 ZFYVE28Q9HCC9 887 aa13.51□□□□□ -0.25
SNHG3-202ENST00000437681 ZNF236Q9UL36 1845 aa13.51□□□□□ -0.25
SNHG3-202ENST00000437681 RLFQ13129 1914 aa13.51□□□□□ -0.25
SNHG3-202ENST00000437681 MPHOSPH10O00566 681 aaKnown RBP13.5□□□□□ -0.25
SNHG3-202ENST00000437681 LIFRP42702 1097 aa13.5□□□□□ -0.25
SNHG3-202ENST00000437681 JAG1P78504 1218 aa13.5□□□□□ -0.25
SNHG3-202ENST00000437681 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.5□□□□□ -0.25
SNHG3-202ENST00000437681 NID2Q14112 1375 aa13.5□□□□□ -0.25
SNHG3-202ENST00000437681 NEDD4P46934 1319 aa13.5□□□□□ -0.25
SNHG3-202ENST00000437681 FAM196BA6NMK8 535 aa13.5□□□□□ -0.25
SNHG3-202ENST00000437681 EEF2P13639 858 aaKnown RBP13.5□□□□□ -0.25
SNHG3-202ENST00000437681 SMARCA1P28370 1054 aa13.5□□□□□ -0.25
SNHG3-202ENST00000437681 MCM5P33992 734 aa13.5□□□□□ -0.25
SNHG3-202ENST00000437681 SPP2Q13103 211 aa13.5□□□□□ -0.25
SNHG3-202ENST00000437681 ARHGEF6Q15052 776 aa13.5□□□□□ -0.25
SNHG3-202ENST00000437681 PPP2R5BQ15173 497 aa13.5□□□□□ -0.25
SNHG3-202ENST00000437681 FAM160B2Q86V87 743 aa13.5□□□□□ -0.25
SNHG3-202ENST00000437681 ZSCAN10Q96SZ4 725 aaPredicted RBP13.5□□□□□ -0.25
SNHG3-202ENST00000437681 BEGAINQ9BUH8 593 aa13.5□□□□□ -0.25
SNHG3-202ENST00000437681 SNHG28P0DPA3 235 aa13.49□□□□□ -0.25
SNHG3-202ENST00000437681 RAB3GAP1Q15042 981 aa13.49□□□□□ -0.25
SNHG3-202ENST00000437681 EMILIN3Q9NT22 766 aa13.49□□□□□ -0.25
SNHG3-202ENST00000437681 TACC3Q9Y6A5 838 aa13.49□□□□□ -0.25
SNHG3-202ENST00000437681 RANBP6O60518 1105 aaKnown RBP13.49□□□□□ -0.25
SNHG3-202ENST00000437681 CATSPERGQ6ZRH7 1159 aa13.49□□□□□ -0.25
SNHG3-202ENST00000437681 CEP95Q96GE4 821 aa13.49□□□□□ -0.25
SNHG3-202ENST00000437681 IL17RBQ9NRM6 502 aa13.49□□□□□ -0.25
SNHG3-202ENST00000437681 MORF4L1Q9UBU8 362 aa13.49□□□□□ -0.25
SNHG3-202ENST00000437681 FEM1BQ9UK73 627 aa13.49□□□□□ -0.25
SNHG3-202ENST00000437681 ERICH2A1L162 156 aa13.48□□□□□ -0.25
SNHG3-202ENST00000437681 BTBD19C9JJ37 291 aa13.48□□□□□ -0.25
SNHG3-202ENST00000437681 CALM1P0DP23 149 aa13.48□□□□□ -0.25
SNHG3-202ENST00000437681 CALM2P0DP24 149 aa13.48□□□□□ -0.25
SNHG3-202ENST00000437681 CALM3P0DP25 149 aa13.48□□□□□ -0.25
SNHG3-202ENST00000437681 OAZ1P54368 228 aa13.48□□□□□ -0.25
SNHG3-202ENST00000437681 SEC23AQ15436 765 aa13.48□□□□□ -0.25
SNHG3-202ENST00000437681 C8orf34Q49A92 452 aa13.48□□□□□ -0.25
SNHG3-202ENST00000437681 BTNL9Q6UXG8 535 aa13.48□□□□□ -0.25
SNHG3-202ENST00000437681 FEZ1Q99689 392 aa13.48□□□□□ -0.25
SNHG3-202ENST00000437681 PRDM10Q9NQV6 1147 aa13.48□□□□□ -0.25
SNHG3-202ENST00000437681 RNF186Q9NXI6 227 aa13.48□□□□□ -0.25
SNHG3-202ENST00000437681 HOXC10Q9NYD6 342 aa13.48□□□□□ -0.25
SNHG3-202ENST00000437681 ADAMTS5Q9UNA0 930 aa13.48□□□□□ -0.25
SNHG3-202ENST00000437681 AOC2O75106 756 aa13.48□□□□□ -0.25
SNHG3-202ENST00000437681 MTMR2Q13614 643 aa13.48□□□□□ -0.25
SNHG3-202ENST00000437681 GPATCH4Q5T3I0 446 aaKnown RBP13.48□□□□□ -0.25
SNHG3-202ENST00000437681 SGMS1Q86VZ5 419 aa13.48□□□□□ -0.25
SNHG3-202ENST00000437681 SKAP1Q86WV1 359 aa13.48□□□□□ -0.25
SNHG3-202ENST00000437681 NEK1Q96PY6 1258 aa13.48□□□□□ -0.25
SNHG3-202ENST00000437681 UBAC1Q9BSL1 405 aa13.48□□□□□ -0.25
SNHG3-202ENST00000437681 AGXT2Q9BYV1 514 aa13.48□□□□□ -0.25
SNHG3-202ENST00000437681 FZD1Q9UP38 647 aa13.48□□□□□ -0.25
SNHG3-202ENST00000437681 ATP2A1O14983 1001 aa13.47□□□□□ -0.25
SNHG3-202ENST00000437681 DDAH1O94760 285 aa13.47□□□□□ -0.25
SNHG3-202ENST00000437681 CTCFP49711 727 aaPredicted RBP13.47□□□□□ -0.25
SNHG3-202ENST00000437681 PRMT2P55345 433 aa13.47□□□□□ -0.25
SNHG3-202ENST00000437681 EXOSC10Q01780 885 aaKnown RBP13.47□□□□□ -0.25
SNHG3-202ENST00000437681 TPRNQ4KMQ1 711 aa13.47□□□□□ -0.25
SNHG3-202ENST00000437681 DHX32Q7L7V1 743 aaKnown RBP13.47□□□□□ -0.25
SNHG3-202ENST00000437681 LZTS2Q9BRK4 669 aa13.47□□□□□ -0.25
SNHG3-202ENST00000437681 ZSWIM5Q9P217 1185 aa13.47□□□□□ -0.25
SNHG3-202ENST00000437681 UTRNP46939 3433 aa13.47□□□□□ -0.25
SNHG3-202ENST00000437681 EVX2Q03828 476 aa13.47□□□□□ -0.25
SNHG3-202ENST00000437681 ASPRV1Q53RT3 343 aa13.47□□□□□ -0.25
SNHG3-202ENST00000437681 PTPN18Q99952 460 aa13.47□□□□□ -0.25
SNHG3-202ENST00000437681 PDHXO00330 501 aa13.46□□□□□ -0.25
SNHG3-202ENST00000437681 TLR2O60603 784 aa13.46□□□□□ -0.25
SNHG3-202ENST00000437681 KDM4AO75164 1064 aa13.46□□□□□ -0.25
SNHG3-202ENST00000437681 VCAM1P19320 739 aa13.46□□□□□ -0.25
SNHG3-202ENST00000437681 HAND2P61296 217 aa13.46□□□□□ -0.25
SNHG3-202ENST00000437681 TRAF1Q13077 416 aa13.46□□□□□ -0.25
SNHG3-202ENST00000437681 SHCBP1Q8NEM2 672 aa13.46□□□□□ -0.25
SNHG3-202ENST00000437681 CHURC1Q8WUH1 139 aa13.46□□□□□ -0.25
SNHG3-202ENST00000437681 CHMP4CQ96CF2 233 aa13.46□□□□□ -0.25
SNHG3-202ENST00000437681 MGAMO43451 1857 aa13.46□□□□□ -0.25
SNHG3-202ENST00000437681 A0A1W2PRG0 241 aa13.46□□□□□ -0.25
SNHG3-202ENST00000437681 TRIM75PA6NK02 468 aa13.46□□□□□ -0.25
SNHG3-202ENST00000437681 IGF2BP3O00425 579 aaKnown RBP eCLIP13.46□□□□□ -0.25
SNHG3-202ENST00000437681 CAPN2P17655 700 aa13.46□□□□□ -0.25
SNHG3-202ENST00000437681 RBM25P49756 843 aaKnown RBP13.46□□□□□ -0.25
SNHG3-202ENST00000437681 EVCP57679 992 aa13.46□□□□□ -0.25
SNHG3-202ENST00000437681 CNKSR2Q8WXI2 1034 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms