RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 ITGA6P23229 1130 aa12.33□□□□□ -0.44
SCN4A-201ENST00000435607 COG7P83436 770 aa12.33□□□□□ -0.44
SCN4A-201ENST00000435607 DMP1Q13316 513 aaPredicted RBP12.33□□□□□ -0.44
SCN4A-201ENST00000435607 VSIG1Q86XK7 387 aa12.33□□□□□ -0.44
SCN4A-201ENST00000435607 DDX27Q96GQ7 796 aaKnown RBP12.33□□□□□ -0.44
SCN4A-201ENST00000435607 LRWD1Q9UFC0 647 aa12.33□□□□□ -0.44
SCN4A-201ENST00000435607 F13A1P00488 732 aa12.33□□□□□ -0.44
SCN4A-201ENST00000435607 GTF2A1P52655 376 aaPredicted RBP12.33□□□□□ -0.44
SCN4A-201ENST00000435607 MTMR3Q13615 1198 aa12.33□□□□□ -0.44
SCN4A-201ENST00000435607 KARSQ15046 597 aaKnown RBP12.33□□□□□ -0.44
SCN4A-201ENST00000435607 PIK3AP1Q6ZUJ8 805 aa12.33□□□□□ -0.44
SCN4A-201ENST00000435607 ZBED2Q9BTP6 218 aa12.33□□□□□ -0.44
SCN4A-201ENST00000435607 PSDA5PKW4 1024 aaPredicted RBP12.32□□□□□ -0.44
SCN4A-201ENST00000435607 A6NJR5 290 aa12.32□□□□□ -0.44
SCN4A-201ENST00000435607 TFCP2Q12800 502 aa12.32□□□□□ -0.44
SCN4A-201ENST00000435607 KCTD2Q14681 263 aa12.32□□□□□ -0.44
SCN4A-201ENST00000435607 WHAMMQ8TF30 809 aa12.32□□□□□ -0.44
SCN4A-201ENST00000435607 AATFQ9NY61 560 aaKnown RBP eCLIP12.32□□□□□ -0.44
SCN4A-201ENST00000435607 ZRANB1Q9UGI0 708 aa12.32□□□□□ -0.44
SCN4A-201ENST00000435607 CNPY2Q9Y2B0 182 aa12.32□□□□□ -0.44
SCN4A-201ENST00000435607 RALGAPBQ86X10 1494 aa12.32□□□□□ -0.44
SCN4A-201ENST00000435607 PPARGP37231 505 aaPredicted RBP12.32□□□□□ -0.44
SCN4A-201ENST00000435607 PDE1AP54750 535 aa12.32□□□□□ -0.44
SCN4A-201ENST00000435607 MYL5Q02045 173 aa12.32□□□□□ -0.44
SCN4A-201ENST00000435607 KLHL40Q2TBA0 621 aa12.32□□□□□ -0.44
SCN4A-201ENST00000435607 TPH2Q8IWU9 490 aa12.32□□□□□ -0.44
SCN4A-201ENST00000435607 BAG1Q99933 345 aaPredicted RBP12.32□□□□□ -0.44
SCN4A-201ENST00000435607 DNAJC25Q9H1X3 360 aa12.32□□□□□ -0.44
SCN4A-201ENST00000435607 TMEM191BP0C7N4 346 aa12.32□□□□□ -0.44
SCN4A-201ENST00000435607 TROVE2P10155 538 aaKnown RBP eCLIP12.32□□□□□ -0.44
SCN4A-201ENST00000435607 SUPT20HL1Q3ZLR7 823 aa12.32□□□□□ -0.44
SCN4A-201ENST00000435607 CCDC93Q567U6 631 aa12.32□□□□□ -0.44
SCN4A-201ENST00000435607 C1orf112Q9NSG2 853 aa12.32□□□□□ -0.44
SCN4A-201ENST00000435607 ORC6Q9Y5N6 252 aa12.32□□□□□ -0.44
SCN4A-201ENST00000435607 MAP3K5Q99683 1374 aa12.32□□□□□ -0.44
SCN4A-201ENST00000435607 PPP2R5EQ16537 467 aa12.32□□□□□ -0.44
SCN4A-201ENST00000435607 CTAGE3PQ8IX95 158 aa12.32□□□□□ -0.44
SCN4A-201ENST00000435607 SLC17A8Q8NDX2 589 aa12.32□□□□□ -0.44
SCN4A-201ENST00000435607 N4BP2L2Q92802 583 aaPredicted RBP12.32□□□□□ -0.44
SCN4A-201ENST00000435607 CNKSR1Q969H4 720 aa12.32□□□□□ -0.44
SCN4A-201ENST00000435607 VPS18Q9P253 973 aa12.32□□□□□ -0.44
SCN4A-201ENST00000435607 TTF2Q9UNY4 1162 aaKnown RBP12.32□□□□□ -0.44
SCN4A-201ENST00000435607 NOS1P29475 1434 aa12.32□□□□□ -0.44
SCN4A-201ENST00000435607 CCDC84Q86UT8 332 aaPredicted RBP12.32□□□□□ -0.44
SCN4A-201ENST00000435607 NME8Q8N427 588 aa12.32□□□□□ -0.44
SCN4A-201ENST00000435607 CDKL2Q92772 493 aa12.32□□□□□ -0.44
SCN4A-201ENST00000435607 IQGAP2Q13576 1575 aa12.32□□□□□ -0.44
SCN4A-201ENST00000435607 POLGP54098 1239 aaPredicted RBP12.32□□□□□ -0.44
SCN4A-201ENST00000435607 FAM71BQ8TC56 605 aa12.32□□□□□ -0.44
SCN4A-201ENST00000435607 MICAL1Q8TDZ2 1067 aa12.32□□□□□ -0.44
SCN4A-201ENST00000435607 MROH5Q6ZUA9 1318 aa12.32□□□□□ -0.44
SCN4A-201ENST00000435607 WDR64B1ANS9 1081 aa12.32□□□□□ -0.44
SCN4A-201ENST00000435607 RHOXF2BP0C7M4 288 aa12.32□□□□□ -0.44
SCN4A-201ENST00000435607 DENND2CQ68D51 928 aa12.32□□□□□ -0.44
SCN4A-201ENST00000435607 SMC5Q8IY18 1101 aa12.32□□□□□ -0.44
SCN4A-201ENST00000435607 ELMOD1Q8N336 334 aa12.32□□□□□ -0.44
SCN4A-201ENST00000435607 RHOXF2Q9BQY4 288 aa12.32□□□□□ -0.44
SCN4A-201ENST00000435607 FLT4P35916 1363 aa12.31□□□□□ -0.44
SCN4A-201ENST00000435607 ABCD1P33897 745 aa12.31□□□□□ -0.44
SCN4A-201ENST00000435607 PAK1Q13153 545 aa12.31□□□□□ -0.44
SCN4A-201ENST00000435607 CREB3L3Q68CJ9 461 aa12.31□□□□□ -0.44
SCN4A-201ENST00000435607 SESTD1Q86VW0 696 aa12.31□□□□□ -0.44
SCN4A-201ENST00000435607 SLFN12Q8IYM2 578 aa12.31□□□□□ -0.44
SCN4A-201ENST00000435607 DNAJC8O75937 253 aaPredicted RBP12.31□□□□□ -0.44
SCN4A-201ENST00000435607 REXO1Q8N1G1 1221 aaKnown RBP12.31□□□□□ -0.44
SCN4A-201ENST00000435607 TRPM2O94759 1503 aa12.31□□□□□ -0.44
SCN4A-201ENST00000435607 A0A1B0GVL5 298 aa12.31□□□□□ -0.44
SCN4A-201ENST00000435607 FAM83GA6ND36 823 aa12.31□□□□□ -0.44
SCN4A-201ENST00000435607 TXNDC9O14530 226 aa12.31□□□□□ -0.44
SCN4A-201ENST00000435607 IFNA8P32881 189 aa12.31□□□□□ -0.44
SCN4A-201ENST00000435607 ATP8A2Q9NTI2 1148 aa12.31□□□□□ -0.44
SCN4A-201ENST00000435607 RNF8O76064 485 aa12.31□□□□□ -0.44
SCN4A-201ENST00000435607 ZSCAN23Q3MJ62 389 aa12.31□□□□□ -0.44
SCN4A-201ENST00000435607 FASTKD5Q7L8L6 764 aaKnown RBP12.31□□□□□ -0.44
SCN4A-201ENST00000435607 CABLES1Q8TDN4 633 aa12.31□□□□□ -0.44
SCN4A-201ENST00000435607 ADD3Q9UEY8 706 aaKnown RBP12.31□□□□□ -0.44
SCN4A-201ENST00000435607 FANCAO15360 1455 aa12.31□□□□□ -0.44
SCN4A-201ENST00000435607 TTC4O95801 387 aa12.31□□□□□ -0.44
SCN4A-201ENST00000435607 HPDP32754 393 aaPredicted RBP12.31□□□□□ -0.44
SCN4A-201ENST00000435607 ECE1P42892 770 aa12.31□□□□□ -0.44
SCN4A-201ENST00000435607 PEX26Q7Z412 305 aa12.31□□□□□ -0.44
SCN4A-201ENST00000435607 EXOC4Q96A65 974 aa12.31□□□□□ -0.44
SCN4A-201ENST00000435607 VPS37BQ9H9H4 285 aa12.31□□□□□ -0.44
SCN4A-201ENST00000435607 OLA1Q9NTK5 396 aaKnown RBP12.31□□□□□ -0.44
SCN4A-201ENST00000435607 IFNKQ9P0W0 207 aa12.31□□□□□ -0.44
SCN4A-201ENST00000435607 M0R2C6 588 aa12.31□□□□□ -0.44
SCN4A-201ENST00000435607 POLR2MP0CAP2 368 aa12.31□□□□□ -0.44
SCN4A-201ENST00000435607 NOP14P78316 857 aaKnown RBP12.31□□□□□ -0.44
SCN4A-201ENST00000435607 RUFY3Q7L099 469 aa12.31□□□□□ -0.44
SCN4A-201ENST00000435607 NAPGQ99747 312 aaPredicted RBP12.31□□□□□ -0.44
SCN4A-201ENST00000435607 YTHDC2Q9H6S0 1430 aaKnown RBP12.3□□□□□ -0.44
SCN4A-201ENST00000435607 HNRNPCL2B2RXH8 293 aa12.3□□□□□ -0.44
SCN4A-201ENST00000435607 HNRNPCL1O60812 293 aaKnown RBP12.3□□□□□ -0.44
SCN4A-201ENST00000435607 TTC38Q5R3I4 469 aa12.3□□□□□ -0.44
SCN4A-201ENST00000435607 PLBD2Q8NHP8 589 aa12.3□□□□□ -0.44
SCN4A-201ENST00000435607 USP40Q9NVE5 1235 aa12.3□□□□□ -0.44
SCN4A-201ENST00000435607 TYRO3Q06418 890 aa12.3□□□□□ -0.44
SCN4A-201ENST00000435607 TAF11Q15544 211 aa12.3□□□□□ -0.44
SCN4A-201ENST00000435607 MYO1AQ9UBC5 1043 aa12.3□□□□□ -0.44
SCN4A-201ENST00000435607 SYNRGQ9UMZ2 1314 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms