RNA–Protein interactions for RNA: ENST00000435532.7

NEDD4-202, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD4, Length 5,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-202ENST00000435532 NT5C2P49902 561 aa17.44■□□□□ 0.38
NEDD4-202ENST00000435532 TFDP1Q14186 410 aa17.44■□□□□ 0.38
NEDD4-202ENST00000435532 KIAA1524Q8TCG1 905 aa17.44■□□□□ 0.38
NEDD4-202ENST00000435532 ZNF274Q96GC6 653 aaPredicted RBP17.44■□□□□ 0.38
NEDD4-202ENST00000435532 PUS3Q9BZE2 481 aaKnown RBP17.44■□□□□ 0.38
NEDD4-202ENST00000435532 PDCL2Q8N4E4 241 aa17.43■□□□□ 0.38
NEDD4-202ENST00000435532 PHKBQ93100 1093 aa17.43■□□□□ 0.38
NEDD4-202ENST00000435532 RTEL1Q9NZ71 1219 aa17.43■□□□□ 0.38
NEDD4-202ENST00000435532 CPSF1Q10570 1443 aaKnown RBP17.43■□□□□ 0.38
NEDD4-202ENST00000435532 DNAJC25Q9H1X3 360 aa17.43■□□□□ 0.38
NEDD4-202ENST00000435532 ATP6V0A2Q9Y487 856 aa17.43■□□□□ 0.38
NEDD4-202ENST00000435532 SSH2Q76I76 1423 aa17.43■□□□□ 0.38
NEDD4-202ENST00000435532 GCNT3O95395 438 aa17.43■□□□□ 0.38
NEDD4-202ENST00000435532 PLCB3Q01970 1234 aa17.43■□□□□ 0.38
NEDD4-202ENST00000435532 APOBEC3FQ8IUX4 373 aaKnown RBP17.43■□□□□ 0.38
NEDD4-202ENST00000435532 TMX1Q9H3N1 280 aa17.43■□□□□ 0.38
NEDD4-202ENST00000435532 RNF17Q9BXT8 1623 aaKnown RBP17.43■□□□□ 0.38
NEDD4-202ENST00000435532 TNFAIP3P21580 790 aa17.43■□□□□ 0.38
NEDD4-202ENST00000435532 UTP14CQ5TAP6 766 aaKnown RBP17.43■□□□□ 0.38
NEDD4-202ENST00000435532 PLA2G4DQ86XP0 818 aa17.43■□□□□ 0.38
NEDD4-202ENST00000435532 FOXP4Q8IVH2 680 aaPredicted RBP17.43■□□□□ 0.38
NEDD4-202ENST00000435532 CCDC155Q8N6L0 562 aa17.43■□□□□ 0.38
NEDD4-202ENST00000435532 SYT1P21579 422 aa17.42■□□□□ 0.38
NEDD4-202ENST00000435532 HSP90AA4PQ58FG1 418 aa17.42■□□□□ 0.38
NEDD4-202ENST00000435532 FAM102BQ5T8I3 360 aa17.42■□□□□ 0.38
NEDD4-202ENST00000435532 TSGA10Q9BZW7 698 aa17.42■□□□□ 0.38
NEDD4-202ENST00000435532 EXOC3O60645 756 aa17.42■□□□□ 0.38
NEDD4-202ENST00000435532 KRT19P08727 400 aa17.42■□□□□ 0.38
NEDD4-202ENST00000435532 CCDC77Q9BR77 488 aa17.42■□□□□ 0.38
NEDD4-202ENST00000435532 LUC7L2Q9Y383 392 aaKnown RBP17.42■□□□□ 0.38
NEDD4-202ENST00000435532 GNG11P61952 73 aa17.42■□□□□ 0.38
NEDD4-202ENST00000435532 PRR16Q569H4 304 aa17.42■□□□□ 0.38
NEDD4-202ENST00000435532 INCENPQ9NQS7 918 aa17.42■□□□□ 0.38
NEDD4-202ENST00000435532 VPS54Q9P1Q0 977 aa17.42■□□□□ 0.38
NEDD4-202ENST00000435532 SERPINB13Q9UIV8 391 aa17.42■□□□□ 0.38
NEDD4-202ENST00000435532 ZMYM6O95789 1325 aa17.42■□□□□ 0.38
NEDD4-202ENST00000435532 CLTCQ00610 1675 aaKnown RBP17.42■□□□□ 0.38
NEDD4-202ENST00000435532 FAM160B2Q86V87 743 aa17.42■□□□□ 0.38
NEDD4-202ENST00000435532 HSPD1P10809 573 aaKnown RBP17.42■□□□□ 0.38
NEDD4-202ENST00000435532 TRIM14Q14142 442 aa17.42■□□□□ 0.38
NEDD4-202ENST00000435532 FANCBQ8NB91 859 aa17.42■□□□□ 0.38
NEDD4-202ENST00000435532 BCCIPQ9P287 314 aaKnown RBP eCLIP17.42■□□□□ 0.38
NEDD4-202ENST00000435532 PCDHB13Q9Y5F0 798 aa17.42■□□□□ 0.38
NEDD4-202ENST00000435532 CLTCL1P53675 1640 aa17.41■□□□□ 0.38
NEDD4-202ENST00000435532 hCG_1984214I3L0E3 225 aa17.41■□□□□ 0.38
NEDD4-202ENST00000435532 ADORA1P30542 326 aa17.41■□□□□ 0.38
NEDD4-202ENST00000435532 ZNF713Q8N859 430 aaPredicted RBP17.41■□□□□ 0.38
NEDD4-202ENST00000435532 PPP1R14CQ8TAE6 165 aa17.41■□□□□ 0.38
NEDD4-202ENST00000435532 CDHR1Q96JP9 859 aa17.41■□□□□ 0.38
NEDD4-202ENST00000435532 CYP27B1O15528 508 aa17.41■□□□□ 0.38
NEDD4-202ENST00000435532 CCND2P30279 289 aa17.41■□□□□ 0.38
NEDD4-202ENST00000435532 SYNE4Q8N205 404 aa17.41■□□□□ 0.38
NEDD4-202ENST00000435532 C1orf167Q5SNV9 1468 aa17.41■□□□□ 0.38
NEDD4-202ENST00000435532 ESPNB1AK53 854 aa17.41■□□□□ 0.38
NEDD4-202ENST00000435532 TYRO3Q06418 890 aa17.41■□□□□ 0.38
NEDD4-202ENST00000435532 XKR9Q5GH70 373 aa17.41■□□□□ 0.38
NEDD4-202ENST00000435532 HSPA4P34932 840 aa17.41■□□□□ 0.38
NEDD4-202ENST00000435532 GOLGA5Q8TBA6 731 aa17.41■□□□□ 0.38
NEDD4-202ENST00000435532 SPHKAPQ2M3C7 1700 aa17.4■□□□□ 0.38
NEDD4-202ENST00000435532 CCDC175P0C221 793 aa17.4■□□□□ 0.38
NEDD4-202ENST00000435532 SCG2P13521 617 aa17.4■□□□□ 0.38
NEDD4-202ENST00000435532 PTGS1P23219 599 aa17.4■□□□□ 0.38
NEDD4-202ENST00000435532 GLI2P10070 1586 aa17.4■□□□□ 0.38
NEDD4-202ENST00000435532 POLA2Q14181 598 aa17.4■□□□□ 0.38
NEDD4-202ENST00000435532 C8orf34Q49A92 452 aa17.4■□□□□ 0.38
NEDD4-202ENST00000435532 KCNJ14Q9UNX9 436 aa17.4■□□□□ 0.38
NEDD4-202ENST00000435532 CCDC66A2RUB6 948 aa17.4■□□□□ 0.38
NEDD4-202ENST00000435532 MYL5Q02045 173 aa17.4■□□□□ 0.38
NEDD4-202ENST00000435532 NEK8Q86SG6 692 aa17.4■□□□□ 0.38
NEDD4-202ENST00000435532 RNF169Q8NCN4 708 aa17.4■□□□□ 0.38
NEDD4-202ENST00000435532 PCDHA1Q9Y5I3 950 aa17.4■□□□□ 0.38
NEDD4-202ENST00000435532 DAPK3O43293 454 aa17.4■□□□□ 0.38
NEDD4-202ENST00000435532 PODNQ7Z5L7 613 aa17.4■□□□□ 0.38
NEDD4-202ENST00000435532 CNGA4Q8IV77 575 aa17.4■□□□□ 0.38
NEDD4-202ENST00000435532 ZNF341Q9BYN7 854 aa17.4■□□□□ 0.38
NEDD4-202ENST00000435532 MTUS1Q9ULD2 1270 aa17.4■□□□□ 0.38
NEDD4-202ENST00000435532 UNC13BO14795 1591 aa17.4■□□□□ 0.38
NEDD4-202ENST00000435532 PTCH1Q13635 1447 aa17.39■□□□□ 0.38
NEDD4-202ENST00000435532 BMP3P12645 472 aa17.39■□□□□ 0.38
NEDD4-202ENST00000435532 RETREG2Q8NC44 543 aa17.39■□□□□ 0.38
NEDD4-202ENST00000435532 SLC17A8Q8NDX2 589 aa17.39■□□□□ 0.38
NEDD4-202ENST00000435532 ARHGEF1Q92888 912 aaKnown RBP17.39■□□□□ 0.38
NEDD4-202ENST00000435532 DDX25Q9UHL0 483 aaKnown RBP17.39■□□□□ 0.38
NEDD4-202ENST00000435532 UQCRHLA0A096LP55 91 aa17.39■□□□□ 0.37
NEDD4-202ENST00000435532 A0A1B0GVL5 298 aa17.39■□□□□ 0.37
NEDD4-202ENST00000435532 TUBB4AP04350 444 aa17.39■□□□□ 0.37
NEDD4-202ENST00000435532 UQCRHP07919 91 aa17.39■□□□□ 0.37
NEDD4-202ENST00000435532 ATP2A2P16615 1042 aaKnown RBP17.39■□□□□ 0.37
NEDD4-202ENST00000435532 SEL1L2Q5TEA6 688 aa17.39■□□□□ 0.37
NEDD4-202ENST00000435532 NSMCE1Q8WV22 266 aa17.39■□□□□ 0.37
NEDD4-202ENST00000435532 IQCGQ9H095 443 aaKnown RBP17.39■□□□□ 0.37
NEDD4-202ENST00000435532 CSRNP2Q9H175 543 aa17.39■□□□□ 0.37
NEDD4-202ENST00000435532 TNNC2P02585 160 aa17.39■□□□□ 0.37
NEDD4-202ENST00000435532 HOXD10P28358 340 aa17.39■□□□□ 0.37
NEDD4-202ENST00000435532 LRFN2Q9ULH4 789 aa17.39■□□□□ 0.37
NEDD4-202ENST00000435532 GNA14O95837 355 aa17.39■□□□□ 0.37
NEDD4-202ENST00000435532 LIG4P49917 911 aa17.39■□□□□ 0.37
NEDD4-202ENST00000435532 PAK1Q13153 545 aa17.39■□□□□ 0.37
NEDD4-202ENST00000435532 ECE2O60344 883 aa17.39■□□□□ 0.37
NEDD4-202ENST00000435532 STK10O94804 968 aaKnown RBP17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms