RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 NLRP6P59044 892 aa8.34□□□□□ -1.07
CPSF6-202ENST00000435070 MDM2Q00987 491 aaPredicted RBP8.34□□□□□ -1.07
CPSF6-202ENST00000435070 SEMA3FQ13275 785 aa8.34□□□□□ -1.07
CPSF6-202ENST00000435070 KRT31Q15323 416 aa8.34□□□□□ -1.07
CPSF6-202ENST00000435070 AP1ARQ63HQ0 302 aa8.34□□□□□ -1.07
CPSF6-202ENST00000435070 RASSF9O75901 435 aa8.34□□□□□ -1.07
CPSF6-202ENST00000435070 IPO7O95373 1038 aaKnown RBP8.34□□□□□ -1.07
CPSF6-202ENST00000435070 METAP2P50579 478 aaKnown RBP eCLIP8.34□□□□□ -1.07
CPSF6-202ENST00000435070 RIMS1Q86UR5 1692 aaKnown RBP8.34□□□□□ -1.07
CPSF6-202ENST00000435070 PNMA8AQ86V59 439 aaPredicted RBP8.34□□□□□ -1.07
CPSF6-202ENST00000435070 FUKQ8N0W3 1084 aa8.34□□□□□ -1.07
CPSF6-202ENST00000435070 CMTR1Q8N1G2 835 aaKnown RBP8.34□□□□□ -1.07
CPSF6-202ENST00000435070 CEP120Q8N960 986 aa8.34□□□□□ -1.07
CPSF6-202ENST00000435070 ARMC2Q8NEN0 867 aa8.34□□□□□ -1.07
CPSF6-202ENST00000435070 TBC1D22AQ8WUA7 517 aa8.34□□□□□ -1.07
CPSF6-202ENST00000435070 AGXT2Q9BYV1 514 aa8.34□□□□□ -1.07
CPSF6-202ENST00000435070 SENP2Q9HC62 589 aa8.34□□□□□ -1.07
CPSF6-202ENST00000435070 PAG1Q9NWQ8 432 aa8.34□□□□□ -1.07
CPSF6-202ENST00000435070 SETD1AO15047 1707 aaKnown RBP8.34□□□□□ -1.07
CPSF6-202ENST00000435070 PPP1R37O75864 691 aa8.34□□□□□ -1.07
CPSF6-202ENST00000435070 CCDC181Q5TID7 509 aa8.34□□□□□ -1.07
CPSF6-202ENST00000435070 ANKRD13CQ8N6S4 541 aa8.34□□□□□ -1.07
CPSF6-202ENST00000435070 LINS1Q8NG48 757 aa8.34□□□□□ -1.07
CPSF6-202ENST00000435070 ANKRD24Q8TF21 1146 aa8.34□□□□□ -1.07
CPSF6-202ENST00000435070 MYD88Q99836 296 aa8.34□□□□□ -1.07
CPSF6-202ENST00000435070 MAST3O60307 1309 aa8.34□□□□□ -1.07
CPSF6-202ENST00000435070 DNM1LO00429 736 aa8.34□□□□□ -1.07
CPSF6-202ENST00000435070 MPHOSPH10O00566 681 aaKnown RBP8.34□□□□□ -1.07
CPSF6-202ENST00000435070 KCNB1Q14721 858 aa8.34□□□□□ -1.07
CPSF6-202ENST00000435070 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.34□□□□□ -1.07
CPSF6-202ENST00000435070 AENQ8WTP8 325 aaKnown RBP8.34□□□□□ -1.07
CPSF6-202ENST00000435070 EPN3Q9H201 632 aa8.34□□□□□ -1.07
CPSF6-202ENST00000435070 RCCD1A6NED2 376 aa8.34□□□□□ -1.07
CPSF6-202ENST00000435070 NR1D1P20393 614 aa8.34□□□□□ -1.07
CPSF6-202ENST00000435070 HIBCHQ6NVY1 386 aaPredicted RBP8.34□□□□□ -1.07
CPSF6-202ENST00000435070 UBE3BQ7Z3V4 1068 aa8.34□□□□□ -1.07
CPSF6-202ENST00000435070 PROSER2Q86WR7 435 aaPredicted RBP8.34□□□□□ -1.07
CPSF6-202ENST00000435070 TCP11Q8WWU5 503 aa8.34□□□□□ -1.07
CPSF6-202ENST00000435070 EPSTI1Q96J88 318 aa8.34□□□□□ -1.07
CPSF6-202ENST00000435070 TTC26A0AVF1 554 aa8.34□□□□□ -1.08
CPSF6-202ENST00000435070 ATP5J2-PTCD1G3V325 749 aa8.34□□□□□ -1.08
CPSF6-202ENST00000435070 M0R2C6 588 aa8.34□□□□□ -1.08
CPSF6-202ENST00000435070 PTCD1O75127 700 aaKnown RBP8.34□□□□□ -1.08
CPSF6-202ENST00000435070 TMEM132AQ24JP5 1023 aa8.34□□□□□ -1.08
CPSF6-202ENST00000435070 RRAGBQ5VZM2 374 aa8.34□□□□□ -1.08
CPSF6-202ENST00000435070 MAP3K14Q99558 947 aa8.34□□□□□ -1.08
CPSF6-202ENST00000435070 TACO1Q9BSH4 297 aaKnown RBP8.34□□□□□ -1.08
CPSF6-202ENST00000435070 HAUS4Q9H6D7 363 aa8.34□□□□□ -1.08
CPSF6-202ENST00000435070 IRAK4Q9NWZ3 460 aa8.34□□□□□ -1.08
CPSF6-202ENST00000435070 CPSF2Q9P2I0 782 aaKnown RBP8.34□□□□□ -1.08
CPSF6-202ENST00000435070 MYO1AQ9UBC5 1043 aa8.34□□□□□ -1.08
CPSF6-202ENST00000435070 BUB1BO60566 1050 aaPredicted RBP8.33□□□□□ -1.08
CPSF6-202ENST00000435070 KIF4AO95239 1232 aa8.33□□□□□ -1.08
CPSF6-202ENST00000435070 IARSP41252 1262 aaKnown RBP8.33□□□□□ -1.08
CPSF6-202ENST00000435070 IRX1P78414 480 aaPredicted RBP8.33□□□□□ -1.08
CPSF6-202ENST00000435070 DPYDQ12882 1025 aa8.33□□□□□ -1.08
CPSF6-202ENST00000435070 NR5A1Q13285 461 aa8.33□□□□□ -1.08
CPSF6-202ENST00000435070 IMMTQ16891 758 aaKnown RBP8.33□□□□□ -1.08
CPSF6-202ENST00000435070 ODF2Q5BJF6 829 aa8.33□□□□□ -1.08
CPSF6-202ENST00000435070 ZNF483Q8TF39 744 aaPredicted RBP8.33□□□□□ -1.08
CPSF6-202ENST00000435070 STAMBPL1Q96FJ0 436 aa8.33□□□□□ -1.08
CPSF6-202ENST00000435070 HAUS7Q99871 368 aa8.33□□□□□ -1.08
CPSF6-202ENST00000435070 YIPF3Q9GZM5 350 aa8.33□□□□□ -1.08
CPSF6-202ENST00000435070 SPATS2LQ9NUQ6 558 aaKnown RBP8.33□□□□□ -1.08
CPSF6-202ENST00000435070 NFU1Q9UMS0 254 aa8.33□□□□□ -1.08
CPSF6-202ENST00000435070 L3MBTL1Q9Y468 752 aa8.33□□□□□ -1.08
CPSF6-202ENST00000435070 PCDHB6Q9Y5E3 794 aa8.33□□□□□ -1.08
CPSF6-202ENST00000435070 CLTAP09496 248 aa8.33□□□□□ -1.08
CPSF6-202ENST00000435070 INHBEP58166 350 aa8.33□□□□□ -1.08
CPSF6-202ENST00000435070 PPP1R7Q15435 360 aa8.33□□□□□ -1.08
CPSF6-202ENST00000435070 PTGISQ16647 500 aa8.33□□□□□ -1.08
CPSF6-202ENST00000435070 KRT26Q7Z3Y9 468 aa8.33□□□□□ -1.08
CPSF6-202ENST00000435070 ANKRD18BA2A2Z9 1011 aa8.33□□□□□ -1.08
CPSF6-202ENST00000435070 FAM153BP0C7A2 387 aa8.33□□□□□ -1.08
CPSF6-202ENST00000435070 TMOD1P28289 359 aa8.33□□□□□ -1.08
CPSF6-202ENST00000435070 FAM153CQ494X1 144 aa8.33□□□□□ -1.08
CPSF6-202ENST00000435070 OSBP2Q969R2 916 aa8.33□□□□□ -1.08
CPSF6-202ENST00000435070 FAM153AQ9UHL3 310 aa8.33□□□□□ -1.08
CPSF6-202ENST00000435070 TARSL2A2RTX5 802 aaKnown RBP8.33□□□□□ -1.08
CPSF6-202ENST00000435070 KRT86O43790 486 aa8.33□□□□□ -1.08
CPSF6-202ENST00000435070 FGAP02671 866 aa8.33□□□□□ -1.08
CPSF6-202ENST00000435070 HERVK_113P62684 666 aa8.33□□□□□ -1.08
CPSF6-202ENST00000435070 WLSQ5T9L3 541 aa8.33□□□□□ -1.08
CPSF6-202ENST00000435070 NSMCE1Q8WV22 266 aa8.33□□□□□ -1.08
CPSF6-202ENST00000435070 RSRC1Q96IZ7 334 aaKnown RBP8.33□□□□□ -1.08
CPSF6-202ENST00000435070 DSCC1Q9BVC3 393 aa8.33□□□□□ -1.08
CPSF6-202ENST00000435070 CSRNP2Q9H175 543 aa8.33□□□□□ -1.08
CPSF6-202ENST00000435070 LUC7L2Q9Y383 392 aaKnown RBP8.33□□□□□ -1.08
CPSF6-202ENST00000435070 ERCC3P19447 782 aa8.33□□□□□ -1.08
CPSF6-202ENST00000435070 OSBPL7Q9BZF2 842 aa8.33□□□□□ -1.08
CPSF6-202ENST00000435070 INCENPQ9NQS7 918 aa8.33□□□□□ -1.08
CPSF6-202ENST00000435070 ABCC6O95255 1503 aa8.33□□□□□ -1.08
CPSF6-202ENST00000435070 CARSP49589 748 aaKnown RBP8.32□□□□□ -1.08
CPSF6-202ENST00000435070 COPB1P53618 953 aaKnown RBP8.32□□□□□ -1.08
CPSF6-202ENST00000435070 ANTXR2P58335 489 aa8.32□□□□□ -1.08
CPSF6-202ENST00000435070 NKX2-3Q8TAU0 364 aa8.32□□□□□ -1.08
CPSF6-202ENST00000435070 CTAGE1Q96RT6 745 aa8.32□□□□□ -1.08
CPSF6-202ENST00000435070 VPS54Q9P1Q0 977 aa8.32□□□□□ -1.08
CPSF6-202ENST00000435070 PSMD14O00487 310 aa8.32□□□□□ -1.08
CPSF6-202ENST00000435070 NCK2O43639 380 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms