RNA–Protein interactions for RNA: ENST00000434435.1

SMARCAL1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-208ENST00000434435 ACER1Q8TDN7 264 aa27.14■■□□□ 1.94
SMARCAL1-208ENST00000434435 ZNF274Q96GC6 653 aaPredicted RBP27.14■■□□□ 1.94
SMARCAL1-208ENST00000434435 TMX2Q9Y320 296 aa27.14■■□□□ 1.94
SMARCAL1-208ENST00000434435 ZHX2Q9Y6X8 837 aa27.14■■□□□ 1.94
SMARCAL1-208ENST00000434435 LOC285556D6RIA3 1793 aa27.14■■□□□ 1.93
SMARCAL1-208ENST00000434435 MYH6P13533 1939 aa27.14■■□□□ 1.93
SMARCAL1-208ENST00000434435 A0A1W2PRG0 241 aa27.13■■□□□ 1.93
SMARCAL1-208ENST00000434435 CALM1P0DP23 149 aa27.13■■□□□ 1.93
SMARCAL1-208ENST00000434435 CALM2P0DP24 149 aa27.13■■□□□ 1.93
SMARCAL1-208ENST00000434435 CALM3P0DP25 149 aa27.13■■□□□ 1.93
SMARCAL1-208ENST00000434435 ECE1P42892 770 aa27.13■■□□□ 1.93
SMARCAL1-208ENST00000434435 RCAN1P53805 252 aa27.13■■□□□ 1.93
SMARCAL1-208ENST00000434435 MICU3Q86XE3 530 aa27.13■■□□□ 1.93
SMARCAL1-208ENST00000434435 ZNF280CQ8ND82 737 aa27.13■■□□□ 1.93
SMARCAL1-208ENST00000434435 SLC10A4Q96EP9 437 aa27.13■■□□□ 1.93
SMARCAL1-208ENST00000434435 SH2B1Q9NRF2 756 aaPredicted RBP27.13■■□□□ 1.93
SMARCAL1-208ENST00000434435 NID2Q14112 1375 aa27.12■■□□□ 1.93
SMARCAL1-208ENST00000434435 K7ELQ4 463 aaPredicted RBP27.12■■□□□ 1.93
SMARCAL1-208ENST00000434435 PPATQ06203 517 aa27.12■■□□□ 1.93
SMARCAL1-208ENST00000434435 BECN1Q14457 450 aa27.12■■□□□ 1.93
SMARCAL1-208ENST00000434435 NUP133Q8WUM0 1156 aa27.12■■□□□ 1.93
SMARCAL1-208ENST00000434435 MYL10Q9BUA6 226 aa27.12■■□□□ 1.93
SMARCAL1-208ENST00000434435 GOPCQ9HD26 462 aa27.12■■□□□ 1.93
SMARCAL1-208ENST00000434435 GOLGA8AA7E2F4 631 aa27.11■■□□□ 1.93
SMARCAL1-208ENST00000434435 USP17L10C9JJH3 530 aa27.11■■□□□ 1.93
SMARCAL1-208ENST00000434435 LARGE1O95461 756 aa27.11■■□□□ 1.93
SMARCAL1-208ENST00000434435 PDIA3P30101 505 aaKnown RBP27.11■■□□□ 1.93
SMARCAL1-208ENST00000434435 METAP2P50579 478 aaKnown RBP eCLIP27.11■■□□□ 1.93
SMARCAL1-208ENST00000434435 HUNKP57058 714 aa27.11■■□□□ 1.93
SMARCAL1-208ENST00000434435 TROAPQ12815 778 aa27.11■■□□□ 1.93
SMARCAL1-208ENST00000434435 SPP2Q13103 211 aa27.11■■□□□ 1.93
SMARCAL1-208ENST00000434435 ME3Q16798 604 aa27.11■■□□□ 1.93
SMARCAL1-208ENST00000434435 RAB11FIP4Q86YS3 637 aa27.11■■□□□ 1.93
SMARCAL1-208ENST00000434435 GMCL1P1Q8NEA9 526 aa27.11■■□□□ 1.93
SMARCAL1-208ENST00000434435 OTUD5Q96G74 571 aa27.11■■□□□ 1.93
SMARCAL1-208ENST00000434435 KIAA1683Q9H0B3 1180 aa27.11■■□□□ 1.93
SMARCAL1-208ENST00000434435 MTMR7Q9Y216 660 aa27.11■■□□□ 1.93
SMARCAL1-208ENST00000434435 AFG3L2Q9Y4W6 797 aa27.11■■□□□ 1.93
SMARCAL1-208ENST00000434435 RXRAP19793 462 aa27.1■■□□□ 1.93
SMARCAL1-208ENST00000434435 PPIL2Q13356 520 aa27.1■■□□□ 1.93
SMARCAL1-208ENST00000434435 CNKSR2Q8WXI2 1034 aa27.1■■□□□ 1.93
SMARCAL1-208ENST00000434435 OPTNQ96CV9 577 aa27.1■■□□□ 1.93
SMARCAL1-208ENST00000434435 TMX3Q96JJ7 454 aa27.1■■□□□ 1.93
SMARCAL1-208ENST00000434435 MAP3K14Q99558 947 aa27.1■■□□□ 1.93
SMARCAL1-208ENST00000434435 SLKQ9H2G2 1235 aaPredicted RBP27.1■■□□□ 1.93
SMARCAL1-208ENST00000434435 VCPKMTQ9H867 229 aa27.1■■□□□ 1.93
SMARCAL1-208ENST00000434435 TRIM75PA6NK02 468 aa27.09■■□□□ 1.93
SMARCAL1-208ENST00000434435 TMEM88BA6NKF7 163 aa27.09■■□□□ 1.93
SMARCAL1-208ENST00000434435 RAD21O60216 631 aa27.09■■□□□ 1.93
SMARCAL1-208ENST00000434435 USP14P54578 494 aa27.09■■□□□ 1.93
SMARCAL1-208ENST00000434435 STK3Q13188 491 aa27.09■■□□□ 1.93
SMARCAL1-208ENST00000434435 MTMR2Q13614 643 aa27.09■■□□□ 1.93
SMARCAL1-208ENST00000434435 ZYXQ15942 572 aaKnown RBP27.09■■□□□ 1.93
SMARCAL1-208ENST00000434435 SLFN13Q68D06 897 aa27.09■■□□□ 1.93
SMARCAL1-208ENST00000434435 CTCFLQ8NI51 663 aaPredicted RBP27.09■■□□□ 1.93
SMARCAL1-208ENST00000434435 HPS5Q9UPZ3 1129 aa27.09■■□□□ 1.93
SMARCAL1-208ENST00000434435 PARP14Q460N5 1801 aa27.09■■□□□ 1.93
SMARCAL1-208ENST00000434435 F5H6K3 240 aa27.08■■□□□ 1.93
SMARCAL1-208ENST00000434435 PFKFB2O60825 505 aa27.08■■□□□ 1.93
SMARCAL1-208ENST00000434435 BACE1P56817 501 aa27.08■■□□□ 1.93
SMARCAL1-208ENST00000434435 KLRC3Q07444 240 aa27.08■■□□□ 1.93
SMARCAL1-208ENST00000434435 GRM4Q14833 912 aa27.08■■□□□ 1.93
SMARCAL1-208ENST00000434435 RTN1Q16799 776 aa27.08■■□□□ 1.93
SMARCAL1-208ENST00000434435 SAPCD2Q86UD0 394 aa27.08■■□□□ 1.93
SMARCAL1-208ENST00000434435 CCDC144CPQ8IYA2 1237 aa27.08■■□□□ 1.93
SMARCAL1-208ENST00000434435 DCAF4Q8WV16 495 aa27.08■■□□□ 1.93
SMARCAL1-208ENST00000434435 TLL2Q9Y6L7 1015 aa27.08■■□□□ 1.93
SMARCAL1-208ENST00000434435 C19orf81C9J6K1 198 aa27.07■■□□□ 1.92
SMARCAL1-208ENST00000434435 NDUFB10O96000 172 aa27.07■■□□□ 1.92
SMARCAL1-208ENST00000434435 PDHBP11177 359 aa27.07■■□□□ 1.92
SMARCAL1-208ENST00000434435 KIF5BP33176 963 aa27.07■■□□□ 1.92
SMARCAL1-208ENST00000434435 CCT2P78371 535 aaKnown RBP27.07■■□□□ 1.92
SMARCAL1-208ENST00000434435 PPP2R5BQ15173 497 aa27.07■■□□□ 1.92
SMARCAL1-208ENST00000434435 USP17L2Q6R6M4 530 aa27.07■■□□□ 1.92
SMARCAL1-208ENST00000434435 GTF3C6Q969F1 213 aa27.07■■□□□ 1.92
SMARCAL1-208ENST00000434435 ABT1Q9ULW3 272 aaKnown RBP27.07■■□□□ 1.92
SMARCAL1-208ENST00000434435 PARP1P09874 1014 aaKnown RBP27.06■■□□□ 1.92
SMARCAL1-208ENST00000434435 SNHG28P0DPA3 235 aa27.06■■□□□ 1.92
SMARCAL1-208ENST00000434435 ASPRV1Q53RT3 343 aa27.06■■□□□ 1.92
SMARCAL1-208ENST00000434435 FANCBQ8NB91 859 aa27.06■■□□□ 1.92
SMARCAL1-208ENST00000434435 LPAR1Q92633 364 aa27.06■■□□□ 1.92
SMARCAL1-208ENST00000434435 CHMP4CQ96CF2 233 aa27.06■■□□□ 1.92
SMARCAL1-208ENST00000434435 GMCL1Q96IK5 515 aa27.06■■□□□ 1.92
SMARCAL1-208ENST00000434435 WNK4Q96J92 1243 aa27.06■■□□□ 1.92
SMARCAL1-208ENST00000434435 RBM28Q9NW13 759 aaKnown RBP27.06■■□□□ 1.92
SMARCAL1-208ENST00000434435 CCDC196A0A1B0GTZ2 297 aa27.05■■□□□ 1.92
SMARCAL1-208ENST00000434435 CXCL11O14625 94 aa27.05■■□□□ 1.92
SMARCAL1-208ENST00000434435 IRF6O14896 467 aa27.05■■□□□ 1.92
SMARCAL1-208ENST00000434435 SLC1A4P43007 532 aa27.05■■□□□ 1.92
SMARCAL1-208ENST00000434435 SCRN1Q12765 414 aa27.05■■□□□ 1.92
SMARCAL1-208ENST00000434435 CCDC96Q2M329 555 aa27.05■■□□□ 1.92
SMARCAL1-208ENST00000434435 RASGRP2Q7LDG7 609 aa27.05■■□□□ 1.92
SMARCAL1-208ENST00000434435 NECAB1Q8N987 351 aa27.05■■□□□ 1.92
SMARCAL1-208ENST00000434435 TMOD4Q9NZQ9 345 aa27.05■■□□□ 1.92
SMARCAL1-208ENST00000434435 KCNH4Q9UQ05 1017 aa27.05■■□□□ 1.92
SMARCAL1-208ENST00000434435 HMGCS2P54868 508 aa27.04■■□□□ 1.92
SMARCAL1-208ENST00000434435 SH3D19Q5HYK7 790 aa27.04■■□□□ 1.92
SMARCAL1-208ENST00000434435 GPATCH4Q5T3I0 446 aaKnown RBP27.04■■□□□ 1.92
SMARCAL1-208ENST00000434435 CCDC83Q8IWF9 413 aa27.04■■□□□ 1.92
SMARCAL1-208ENST00000434435 SPICE1Q8N0Z3 855 aa27.04■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms