RNA–Protein interactions for RNA: ENST00000434407.6

HLA-F-220, Transcript of major histocompatibility complex, class I, F, humanhuman

BASIC

Gene HLA-F, Length 884 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-220ENST00000434407 TSPY8P0CW00 308 aa21.78■■□□□ 1.08
HLA-F-220ENST00000434407 USP17L24Q0WX57 530 aa21.78■■□□□ 1.08
HLA-F-220ENST00000434407 FAM47AQ5JRC9 791 aa21.78■■□□□ 1.08
HLA-F-220ENST00000434407 CATSPERGQ6ZRH7 1159 aa21.78■■□□□ 1.08
HLA-F-220ENST00000434407 TBC1D10CQ8IV04 446 aa21.78■■□□□ 1.08
HLA-F-220ENST00000434407 CD99L2Q8TCZ2 262 aa21.78■■□□□ 1.08
HLA-F-220ENST00000434407 CEP95Q96GE4 821 aa21.78■■□□□ 1.08
HLA-F-220ENST00000434407 SYNPO2Q9UMS6 1093 aa21.78■■□□□ 1.08
HLA-F-220ENST00000434407 ZNF213O14771 459 aa21.77■■□□□ 1.08
HLA-F-220ENST00000434407 GCLCP48506 637 aaPredicted RBP21.77■■□□□ 1.08
HLA-F-220ENST00000434407 NOVP48745 357 aa21.77■■□□□ 1.08
HLA-F-220ENST00000434407 IRX3P78415 501 aaPredicted RBP21.77■■□□□ 1.08
HLA-F-220ENST00000434407 LACTBP83111 547 aaPredicted RBP21.77■■□□□ 1.08
HLA-F-220ENST00000434407 PTH1RQ03431 593 aa21.77■■□□□ 1.08
HLA-F-220ENST00000434407 SMCR8Q8TEV9 937 aaPredicted RBP21.77■■□□□ 1.08
HLA-F-220ENST00000434407 P2RX7Q99572 595 aaKnown RBP21.77■■□□□ 1.08
HLA-F-220ENST00000434407 U3KPZ7 1027 aaPredicted RBP21.77■■□□□ 1.08
HLA-F-220ENST00000434407 ZSWIM8A7E2V4 1837 aa21.77■■□□□ 1.08
HLA-F-220ENST00000434407 NT5C2P49902 561 aa21.76■■□□□ 1.07
HLA-F-220ENST00000434407 FAM110CQ1W6H9 321 aa21.76■■□□□ 1.07
HLA-F-220ENST00000434407 ESYT1Q9BSJ8 1104 aa21.76■■□□□ 1.07
HLA-F-220ENST00000434407 RNF41Q9H4P4 317 aaPredicted RBP21.76■■□□□ 1.07
HLA-F-220ENST00000434407 IL17RBQ9NRM6 502 aa21.76■■□□□ 1.07
HLA-F-220ENST00000434407 TSPY2A6NKD2 308 aa21.75■■□□□ 1.07
HLA-F-220ENST00000434407 TTLL1O95922 423 aa21.75■■□□□ 1.07
HLA-F-220ENST00000434407 HERVK_113P62684 666 aa21.75■■□□□ 1.07
HLA-F-220ENST00000434407 PKN2Q16513 984 aaKnown RBP21.75■■□□□ 1.07
HLA-F-220ENST00000434407 IMMTQ16891 758 aaKnown RBP21.75■■□□□ 1.07
HLA-F-220ENST00000434407 POTEEQ6S8J3 1075 aa21.75■■□□□ 1.07
HLA-F-220ENST00000434407 LBX2Q6XYB7 198 aa21.75■■□□□ 1.07
HLA-F-220ENST00000434407 MFSD6Q6ZSS7 791 aa21.75■■□□□ 1.07
HLA-F-220ENST00000434407 OTOP1Q7RTM1 612 aa21.75■■□□□ 1.07
HLA-F-220ENST00000434407 TNS4Q8IZW8 715 aa21.75■■□□□ 1.07
HLA-F-220ENST00000434407 GTF3C2Q8WUA4 911 aaPredicted RBP21.75■■□□□ 1.07
HLA-F-220ENST00000434407 MAP4K1Q92918 833 aa21.75■■□□□ 1.07
HLA-F-220ENST00000434407 MCOLN1Q9GZU1 580 aa21.75■■□□□ 1.07
HLA-F-220ENST00000434407 RPAP3Q9H6T3 665 aaPredicted RBP21.75■■□□□ 1.07
HLA-F-220ENST00000434407 TCP11L1Q9NUJ3 509 aa21.75■■□□□ 1.07
HLA-F-220ENST00000434407 RANBP6O60518 1105 aaKnown RBP21.74■■□□□ 1.07
HLA-F-220ENST00000434407 CTGFP29279 349 aa21.74■■□□□ 1.07
HLA-F-220ENST00000434407 ATP2B2Q01814 1243 aa21.74■■□□□ 1.07
HLA-F-220ENST00000434407 PPP4R3BQ5MIZ7 849 aa21.74■■□□□ 1.07
HLA-F-220ENST00000434407 NKX2-3Q8TAU0 364 aa21.74■■□□□ 1.07
HLA-F-220ENST00000434407 GOPCQ9HD26 462 aa21.74■■□□□ 1.07
HLA-F-220ENST00000434407 MORF4L1Q9UBU8 362 aa21.74■■□□□ 1.07
HLA-F-220ENST00000434407 CLIP2Q9UDT6 1046 aa21.74■■□□□ 1.07
HLA-F-220ENST00000434407 WDR46O15213 610 aaKnown RBP21.73■■□□□ 1.07
HLA-F-220ENST00000434407 ANKRD13CQ8N6S4 541 aa21.73■■□□□ 1.07
HLA-F-220ENST00000434407 ARHGAP39Q9C0H5 1083 aa21.73■■□□□ 1.07
HLA-F-220ENST00000434407 LSG1Q9H089 658 aaKnown RBP21.73■■□□□ 1.07
HLA-F-220ENST00000434407 EFCC1Q9HA90 598 aa21.73■■□□□ 1.07
HLA-F-220ENST00000434407 NEDD4P46934 1319 aa21.73■■□□□ 1.07
HLA-F-220ENST00000434407 CENPFP49454 3210 aa21.72■■□□□ 1.07
HLA-F-220ENST00000434407 CDC45O75419 566 aa21.72■■□□□ 1.07
HLA-F-220ENST00000434407 GNRH1P01148 92 aa21.72■■□□□ 1.07
HLA-F-220ENST00000434407 KIF22Q14807 665 aa21.72■■□□□ 1.07
HLA-F-220ENST00000434407 ARHGEF6Q15052 776 aa21.72■■□□□ 1.07
HLA-F-220ENST00000434407 SPICE1Q8N0Z3 855 aa21.72■■□□□ 1.07
HLA-F-220ENST00000434407 RBPJLQ9UBG7 517 aa21.72■■□□□ 1.07
HLA-F-220ENST00000434407 TRIM17Q9Y577 477 aa21.72■■□□□ 1.07
HLA-F-220ENST00000434407 SPDYE16A6NNV3 312 aaPredicted RBP21.71■■□□□ 1.07
HLA-F-220ENST00000434407 F5H6K3 240 aa21.71■■□□□ 1.07
HLA-F-220ENST00000434407 NMT2O60551 498 aa21.71■■□□□ 1.07
HLA-F-220ENST00000434407 CYP21A2P08686 494 aa21.71■■□□□ 1.07
HLA-F-220ENST00000434407 KLRC3Q07444 240 aa21.71■■□□□ 1.07
HLA-F-220ENST00000434407 COG2Q14746 738 aa21.71■■□□□ 1.07
HLA-F-220ENST00000434407 RRP12Q5JTH9 1297 aaKnown RBP21.71■■□□□ 1.07
HLA-F-220ENST00000434407 GMCL1P1Q8NEA9 526 aa21.71■■□□□ 1.07
HLA-F-220ENST00000434407 TRIM47Q96LD4 638 aa21.71■■□□□ 1.07
HLA-F-220ENST00000434407 TXNRD2Q9NNW7 524 aa21.71■■□□□ 1.07
HLA-F-220ENST00000434407 TOMM22Q9NS69 142 aa21.71■■□□□ 1.07
HLA-F-220ENST00000434407 A0A0G2JMZ2 1700 aa21.71■■□□□ 1.07
HLA-F-220ENST00000434407 NDUFB10O96000 172 aa21.7■■□□□ 1.06
HLA-F-220ENST00000434407 PSMC4P43686 418 aa21.7■■□□□ 1.06
HLA-F-220ENST00000434407 FBXO46Q6PJ61 603 aaPredicted RBP21.7■■□□□ 1.06
HLA-F-220ENST00000434407 ESR2Q92731 530 aa21.7■■□□□ 1.06
HLA-F-220ENST00000434407 HOXC10Q9NYD6 342 aa21.7■■□□□ 1.06
HLA-F-220ENST00000434407 RABGAP1Q9Y3P9 1069 aa21.7■■□□□ 1.06
HLA-F-220ENST00000434407 MYPNQ86TC9 1320 aa21.7■■□□□ 1.06
HLA-F-220ENST00000434407 CNMDO75829 334 aa21.69■■□□□ 1.06
HLA-F-220ENST00000434407 DSG3P32926 999 aa21.69■■□□□ 1.06
HLA-F-220ENST00000434407 KIAA1211Q6ZU35 1233 aa21.69■■□□□ 1.06
HLA-F-220ENST00000434407 TANGO6Q9C0B7 1094 aa21.69■■□□□ 1.06
HLA-F-220ENST00000434407 CNNM2Q9H8M5 875 aa21.69■■□□□ 1.06
HLA-F-220ENST00000434407 ADAMTS5Q9UNA0 930 aa21.69■■□□□ 1.06
HLA-F-220ENST00000434407 RBM8AQ9Y5S9 174 aaKnown RBP21.69■■□□□ 1.06
HLA-F-220ENST00000434407 COL11A1P12107 1806 aaPredicted RBP21.69■■□□□ 1.06
HLA-F-220ENST00000434407 ERVK-9P63128 1117 aa21.68■■□□□ 1.06
HLA-F-220ENST00000434407 ERVK-24P63145 666 aa21.68■■□□□ 1.06
HLA-F-220ENST00000434407 RCSD1Q6JBY9 416 aa21.68■■□□□ 1.06
HLA-F-220ENST00000434407 CASC1Q6TDU7 716 aa21.68■■□□□ 1.06
HLA-F-220ENST00000434407 LRRC47Q8N1G4 583 aaKnown RBP21.68■■□□□ 1.06
HLA-F-220ENST00000434407 GPRC5AQ8NFJ5 357 aa21.68■■□□□ 1.06
HLA-F-220ENST00000434407 TTC14Q96N46 770 aa21.68■■□□□ 1.06
HLA-F-220ENST00000434407 KRT23Q9C075 422 aa21.68■■□□□ 1.06
HLA-F-220ENST00000434407 STX8Q9UNK0 236 aa21.68■■□□□ 1.06
HLA-F-220ENST00000434407 PTPN22Q9Y2R2 807 aa21.68■■□□□ 1.06
HLA-F-220ENST00000434407 PEX10O60683 326 aa21.67■■□□□ 1.06
HLA-F-220ENST00000434407 KDM4AO75164 1064 aa21.67■■□□□ 1.06
HLA-F-220ENST00000434407 PRMT2P55345 433 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms