RNA–Protein interactions for RNA: ENST00000433822.1

COL17A1-204, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-204ENST00000433822 LIFRP42702 1097 aa8.66□□□□□ -1.02
COL17A1-204ENST00000433822 MCAMP43121 646 aa8.66□□□□□ -1.02
COL17A1-204ENST00000433822 RELBQ01201 579 aa8.66□□□□□ -1.02
COL17A1-204ENST00000433822 FKBP4Q02790 459 aaKnown RBP eCLIP8.66□□□□□ -1.02
COL17A1-204ENST00000433822 TRDNQ13061 729 aa8.66□□□□□ -1.02
COL17A1-204ENST00000433822 HLFQ16534 295 aa8.66□□□□□ -1.02
COL17A1-204ENST00000433822 SARM1Q6SZW1 724 aa8.66□□□□□ -1.02
COL17A1-204ENST00000433822 CLEC4GQ6UXB4 293 aa8.66□□□□□ -1.02
COL17A1-204ENST00000433822 ZBTB33Q86T24 672 aa8.66□□□□□ -1.02
COL17A1-204ENST00000433822 SGMS1Q86VZ5 419 aa8.66□□□□□ -1.02
COL17A1-204ENST00000433822 RNF214Q8ND24 703 aa8.66□□□□□ -1.02
COL17A1-204ENST00000433822 TDRD7Q8NHU6 1098 aaKnown RBP8.66□□□□□ -1.02
COL17A1-204ENST00000433822 PIBF1Q8WXW3 757 aa8.66□□□□□ -1.02
COL17A1-204ENST00000433822 PGBD1Q96JS3 809 aa8.66□□□□□ -1.02
COL17A1-204ENST00000433822 AGBL1Q96MI9 1066 aa8.66□□□□□ -1.02
COL17A1-204ENST00000433822 GREM2Q9H772 168 aa8.66□□□□□ -1.02
COL17A1-204ENST00000433822 CNNM2Q9H8M5 875 aa8.66□□□□□ -1.02
COL17A1-204ENST00000433822 POLMQ9NP87 494 aaPredicted RBP8.66□□□□□ -1.02
COL17A1-204ENST00000433822 CNNM1Q9NRU3 951 aa8.66□□□□□ -1.02
COL17A1-204ENST00000433822 SPTLC3Q9NUV7 552 aa8.66□□□□□ -1.02
COL17A1-204ENST00000433822 CCDC87Q9NVE4 849 aa8.66□□□□□ -1.02
COL17A1-204ENST00000433822 POLR3EQ9NVU0 708 aa8.66□□□□□ -1.02
COL17A1-204ENST00000433822 DACT1Q9NYF0 836 aa8.66□□□□□ -1.02
COL17A1-204ENST00000433822 TRMT112Q9UI30 125 aaKnown RBP8.66□□□□□ -1.02
COL17A1-204ENST00000433822 NDUFB9Q9Y6M9 179 aa8.66□□□□□ -1.02
COL17A1-204ENST00000433822 MORC2Q9Y6X9 1032 aaPredicted RBP8.66□□□□□ -1.02
COL17A1-204ENST00000433822 COL24A1Q17RW2 1714 aa8.66□□□□□ -1.02
COL17A1-204ENST00000433822 PDS5AQ29RF7 1337 aaKnown RBP8.65□□□□□ -1.02
COL17A1-204ENST00000433822 UBN2Q6ZU65 1347 aa8.65□□□□□ -1.02
COL17A1-204ENST00000433822 TCRBV5S4A2TA0A5A2 114 aa8.65□□□□□ -1.02
COL17A1-204ENST00000433822 PRC1O43663 620 aa8.65□□□□□ -1.02
COL17A1-204ENST00000433822 ADCY5O95622 1261 aa8.65□□□□□ -1.02
COL17A1-204ENST00000433822 PTMAP06454 111 aaKnown RBP8.65□□□□□ -1.02
COL17A1-204ENST00000433822 PCP11498 1178 aaKnown RBP8.65□□□□□ -1.02
COL17A1-204ENST00000433822 LIG1P18858 919 aa8.65□□□□□ -1.02
COL17A1-204ENST00000433822 CLK2P49760 499 aaKnown RBP8.65□□□□□ -1.02
COL17A1-204ENST00000433822 APOBRQ0VD83 1088 aa8.65□□□□□ -1.02
COL17A1-204ENST00000433822 KIAA2012Q0VF49 1180 aa8.65□□□□□ -1.02
COL17A1-204ENST00000433822 STK3Q13188 491 aa8.65□□□□□ -1.02
COL17A1-204ENST00000433822 DHX8Q14562 1220 aaKnown RBP8.65□□□□□ -1.02
COL17A1-204ENST00000433822 WASHC4Q2M389 1173 aa8.65□□□□□ -1.02
COL17A1-204ENST00000433822 FOXD4L6Q3SYB3 417 aaPredicted RBP8.65□□□□□ -1.02
COL17A1-204ENST00000433822 COL13A1Q5TAT6 717 aaPredicted RBP8.65□□□□□ -1.02
COL17A1-204ENST00000433822 CCDC102BQ68D86 513 aa8.65□□□□□ -1.02
COL17A1-204ENST00000433822 ADALQ6DHV7 355 aa8.65□□□□□ -1.02
COL17A1-204ENST00000433822 GIMAP6Q6P9H5 292 aa8.65□□□□□ -1.02
COL17A1-204ENST00000433822 CPLX2Q6PUV4 134 aaKnown RBP8.65□□□□□ -1.02
COL17A1-204ENST00000433822 FOXD4L3Q6VB84 417 aaPredicted RBP8.65□□□□□ -1.02
COL17A1-204ENST00000433822 FERMT3Q86UX7 667 aa8.65□□□□□ -1.02
COL17A1-204ENST00000433822 FBXO18Q8NFZ0 1043 aa8.65□□□□□ -1.02
COL17A1-204ENST00000433822 KCNG4Q8TDN1 519 aa8.65□□□□□ -1.02
COL17A1-204ENST00000433822 CDC5LQ99459 802 aaKnown RBP8.65□□□□□ -1.02
COL17A1-204ENST00000433822 FKBPLQ9UIM3 349 aa8.65□□□□□ -1.02
COL17A1-204ENST00000433822 ANGEL1Q9UNK9 670 aaKnown RBP8.65□□□□□ -1.02
COL17A1-204ENST00000433822 MRVI1Q9Y6F6 885 aa8.65□□□□□ -1.02
COL17A1-204ENST00000433822 A0A1B0GUL6 1792 aa8.64□□□□□ -1.03
COL17A1-204ENST00000433822 FDPSP14324 419 aaKnown RBP8.64□□□□□ -1.03
COL17A1-204ENST00000433822 PDE6AP16499 860 aa8.64□□□□□ -1.03
COL17A1-204ENST00000433822 MAP3K10Q02779 954 aa8.64□□□□□ -1.03
COL17A1-204ENST00000433822 SRSF11Q05519 484 aaKnown RBP8.64□□□□□ -1.03
COL17A1-204ENST00000433822 CTDSPL2Q05D32 466 aa8.64□□□□□ -1.03
COL17A1-204ENST00000433822 FAM160A1Q05DH4 1040 aa8.64□□□□□ -1.03
COL17A1-204ENST00000433822 MAP3K12Q12852 859 aa8.64□□□□□ -1.03
COL17A1-204ENST00000433822 PPP2R5BQ15173 497 aa8.64□□□□□ -1.03
COL17A1-204ENST00000433822 CCDC152Q4G0S7 254 aa8.64□□□□□ -1.03
COL17A1-204ENST00000433822 INTS6LQ5JSJ4 861 aaKnown RBP8.64□□□□□ -1.03
COL17A1-204ENST00000433822 INTS5Q6P9B9 1019 aaKnown RBP8.64□□□□□ -1.03
COL17A1-204ENST00000433822 SASS6Q6UVJ0 657 aa8.64□□□□□ -1.03
COL17A1-204ENST00000433822 CCDC73Q6ZRK6 1079 aa8.64□□□□□ -1.03
COL17A1-204ENST00000433822 ELOA2Q8IYF1 753 aaPredicted RBP8.64□□□□□ -1.03
COL17A1-204ENST00000433822 ENGASEQ8NFI3 743 aa8.64□□□□□ -1.03
COL17A1-204ENST00000433822 RNF217Q8TC41 542 aa8.64□□□□□ -1.03
COL17A1-204ENST00000433822 BICD2Q8TD16 824 aa8.64□□□□□ -1.03
COL17A1-204ENST00000433822 PRIMPOLQ96LW4 560 aa8.64□□□□□ -1.03
COL17A1-204ENST00000433822 NAP1L5Q96NT1 182 aaPredicted RBP8.64□□□□□ -1.03
COL17A1-204ENST00000433822 NOL10Q9BSC4 688 aaKnown RBP8.64□□□□□ -1.03
COL17A1-204ENST00000433822 UTP14AQ9BVJ6 771 aaKnown RBP8.64□□□□□ -1.03
COL17A1-204ENST00000433822 PUS7LQ9H0K6 701 aaKnown RBP8.64□□□□□ -1.03
COL17A1-204ENST00000433822 ZNF652Q9Y2D9 606 aa8.64□□□□□ -1.03
COL17A1-204ENST00000433822 SCN7AQ01118 1682 aa8.63□□□□□ -1.03
COL17A1-204ENST00000433822 ZNF804BA4D1E1 1349 aa8.63□□□□□ -1.03
COL17A1-204ENST00000433822 ZC3H4Q9UPT8 1303 aaKnown RBP8.63□□□□□ -1.03
COL17A1-204ENST00000433822 MYH14Q7Z406 1995 aaKnown RBP8.63□□□□□ -1.03
COL17A1-204ENST00000433822 FAM237AA0A1B0GTK4 181 aa8.63□□□□□ -1.03
COL17A1-204ENST00000433822 PATL2C9JE40 543 aaKnown RBP8.63□□□□□ -1.03
COL17A1-204ENST00000433822 SH2B2O14492 632 aaPredicted RBP8.63□□□□□ -1.03
COL17A1-204ENST00000433822 CAMTA2O94983 1202 aa8.63□□□□□ -1.03
COL17A1-204ENST00000433822 CHGBP05060 677 aa8.63□□□□□ -1.03
COL17A1-204ENST00000433822 ANTXR2P58335 489 aa8.63□□□□□ -1.03
COL17A1-204ENST00000433822 PDE4DQ08499 809 aa8.63□□□□□ -1.03
COL17A1-204ENST00000433822 DDB1Q16531 1140 aa8.63□□□□□ -1.03
COL17A1-204ENST00000433822 GPR162Q16538 588 aa8.63□□□□□ -1.03
COL17A1-204ENST00000433822 STX1AQ16623 288 aa8.63□□□□□ -1.03
COL17A1-204ENST00000433822 SLC9C2Q5TAH2 1124 aa8.63□□□□□ -1.03
COL17A1-204ENST00000433822 TMTC2Q8N394 836 aa8.63□□□□□ -1.03
COL17A1-204ENST00000433822 LINC00301Q8NCQ3 95 aa8.63□□□□□ -1.03
COL17A1-204ENST00000433822 TIGD1Q96MW7 591 aa8.63□□□□□ -1.03
COL17A1-204ENST00000433822 USP28Q96RU2 1077 aa8.63□□□□□ -1.03
COL17A1-204ENST00000433822 STRBPQ96SI9 672 aaKnown RBP8.63□□□□□ -1.03
COL17A1-204ENST00000433822 BPIFA3Q9BQP9 254 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms