RNA–Protein interactions for RNA: ENST00000433165.6

CNKSR3-202, Transcript of CNKSR family member 3, humanhuman

TSL 1 (best)

Gene CNKSR3, Length 2,347 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-202ENST00000433165 RPAINQ86UA6 219 aa8.77□□□□□ -1.01
CNKSR3-202ENST00000433165 VSTM4Q8IW00 320 aa8.77□□□□□ -1.01
CNKSR3-202ENST00000433165 ERCC4Q92889 916 aaPredicted RBP8.77□□□□□ -1.01
CNKSR3-202ENST00000433165 DCPSQ96C86 337 aaKnown RBP8.77□□□□□ -1.01
CNKSR3-202ENST00000433165 A0A1B0GUL6 1792 aa8.76□□□□□ -1.01
CNKSR3-202ENST00000433165 ERLIN1O75477 346 aa8.76□□□□□ -1.01
CNKSR3-202ENST00000433165 ITGBL1O95965 494 aaPredicted RBP8.76□□□□□ -1.01
CNKSR3-202ENST00000433165 NMIQ13287 307 aaPredicted RBP8.76□□□□□ -1.01
CNKSR3-202ENST00000433165 MCM6Q14566 821 aa8.76□□□□□ -1.01
CNKSR3-202ENST00000433165 ADALQ6DHV7 355 aa8.76□□□□□ -1.01
CNKSR3-202ENST00000433165 SRGAP1Q7Z6B7 1085 aa8.76□□□□□ -1.01
CNKSR3-202ENST00000433165 DHX58Q96C10 678 aa8.76□□□□□ -1.01
CNKSR3-202ENST00000433165 GPATCH3Q96I76 525 aa8.76□□□□□ -1.01
CNKSR3-202ENST00000433165 FAM227BQ96M60 508 aa8.76□□□□□ -1.01
CNKSR3-202ENST00000433165 TRPM7Q96QT4 1865 aa8.76□□□□□ -1.01
CNKSR3-202ENST00000433165 SDF4Q9BRK5 362 aa8.76□□□□□ -1.01
CNKSR3-202ENST00000433165 FAM107BQ9H098 131 aa8.76□□□□□ -1.01
CNKSR3-202ENST00000433165 MED4Q9NPJ6 270 aa8.76□□□□□ -1.01
CNKSR3-202ENST00000433165 TAF6LQ9Y6J9 622 aa8.76□□□□□ -1.01
CNKSR3-202ENST00000433165 PITPNM2Q9BZ72 1349 aa8.76□□□□□ -1.01
CNKSR3-202ENST00000433165 MYO1BO43795 1136 aa8.76□□□□□ -1.01
CNKSR3-202ENST00000433165 CUTAO60888 179 aa8.76□□□□□ -1.01
CNKSR3-202ENST00000433165 N4BP1O75113 896 aaKnown RBP8.76□□□□□ -1.01
CNKSR3-202ENST00000433165 USP17L8P0C7I0 530 aa8.76□□□□□ -1.01
CNKSR3-202ENST00000433165 CHMP4BP1P59074 171 aa8.76□□□□□ -1.01
CNKSR3-202ENST00000433165 ZNF280AP59817 542 aaPredicted RBP8.76□□□□□ -1.01
CNKSR3-202ENST00000433165 E2F4Q16254 413 aa8.76□□□□□ -1.01
CNKSR3-202ENST00000433165 KIF4BQ2VIQ3 1234 aa8.76□□□□□ -1.01
CNKSR3-202ENST00000433165 DNAJC21Q5F1R6 531 aaKnown RBP8.76□□□□□ -1.01
CNKSR3-202ENST00000433165 CLASRPQ8N2M8 674 aaKnown RBP8.76□□□□□ -1.01
CNKSR3-202ENST00000433165 BANK1Q8NDB2 785 aa8.76□□□□□ -1.01
CNKSR3-202ENST00000433165 CNNM3Q8NE01 707 aa8.76□□□□□ -1.01
CNKSR3-202ENST00000433165 SUCLG2Q96I99 432 aa8.76□□□□□ -1.01
CNKSR3-202ENST00000433165 HHIPL1Q96JK4 782 aa8.76□□□□□ -1.01
CNKSR3-202ENST00000433165 CNTNAP1P78357 1384 aa8.76□□□□□ -1.01
CNKSR3-202ENST00000433165 COL4A1P02462 1669 aa8.75□□□□□ -1.01
CNKSR3-202ENST00000433165 CCDC196A0A1B0GTZ2 297 aa8.75□□□□□ -1.01
CNKSR3-202ENST00000433165 STX10O60499 249 aa8.75□□□□□ -1.01
CNKSR3-202ENST00000433165 ME1P48163 572 aa8.75□□□□□ -1.01
CNKSR3-202ENST00000433165 UBASH3AP57075 661 aa8.75□□□□□ -1.01
CNKSR3-202ENST00000433165 MTX1Q13505 466 aa8.75□□□□□ -1.01
CNKSR3-202ENST00000433165 KRT32Q14532 448 aa8.75□□□□□ -1.01
CNKSR3-202ENST00000433165 MAP1SQ66K74 1059 aaPredicted RBP8.75□□□□□ -1.01
CNKSR3-202ENST00000433165 DNAJC5GQ8N7S2 189 aa8.75□□□□□ -1.01
CNKSR3-202ENST00000433165 NSUN7Q8NE18 718 aaKnown RBP8.75□□□□□ -1.01
CNKSR3-202ENST00000433165 PCDHA7Q9UN72 937 aa8.75□□□□□ -1.01
CNKSR3-202ENST00000433165 COL1A1P02452 1464 aaPredicted RBP8.75□□□□□ -1.01
CNKSR3-202ENST00000433165 MAP2K2P36507 400 aa8.75□□□□□ -1.01
CNKSR3-202ENST00000433165 NDUFA8P51970 172 aa8.75□□□□□ -1.01
CNKSR3-202ENST00000433165 TBX2Q13207 712 aaPredicted RBP8.75□□□□□ -1.01
CNKSR3-202ENST00000433165 TUBB2AQ13885 445 aa8.75□□□□□ -1.01
CNKSR3-202ENST00000433165 CAVIN4Q5BKX8 364 aa8.75□□□□□ -1.01
CNKSR3-202ENST00000433165 SULF1Q8IWU6 871 aa8.75□□□□□ -1.01
CNKSR3-202ENST00000433165 FAM177A1Q8N128 213 aaPredicted RBP8.75□□□□□ -1.01
CNKSR3-202ENST00000433165 CEP112Q8N8E3 955 aa8.75□□□□□ -1.01
CNKSR3-202ENST00000433165 ANKRD20A12PQ8NF67 263 aa8.75□□□□□ -1.01
CNKSR3-202ENST00000433165 FBXW7Q969H0 707 aa8.75□□□□□ -1.01
CNKSR3-202ENST00000433165 TUBB2BQ9BVA1 445 aa8.75□□□□□ -1.01
CNKSR3-202ENST00000433165 BICC1Q9H694 974 aaKnown RBP8.75□□□□□ -1.01
CNKSR3-202ENST00000433165 RTEL1Q9NZ71 1219 aa8.75□□□□□ -1.01
CNKSR3-202ENST00000433165 LAMA4Q16363 1823 aa8.74□□□□□ -1.01
CNKSR3-202ENST00000433165 A0A0D9SFI3 127 aa8.74□□□□□ -1.01
CNKSR3-202ENST00000433165 RASSF10A6NK89 507 aa8.74□□□□□ -1.01
CNKSR3-202ENST00000433165 PFKFB2O60825 505 aa8.74□□□□□ -1.01
CNKSR3-202ENST00000433165 TUBBP07437 444 aa8.74□□□□□ -1.01
CNKSR3-202ENST00000433165 SLC3A2P08195 630 aaKnown RBP8.74□□□□□ -1.01
CNKSR3-202ENST00000433165 NBPF7P0C2Y1 421 aaPredicted RBP8.74□□□□□ -1.01
CNKSR3-202ENST00000433165 POTEIP0CG38 1075 aa8.74□□□□□ -1.01
CNKSR3-202ENST00000433165 POTEJP0CG39 1038 aa8.74□□□□□ -1.01
CNKSR3-202ENST00000433165 TOP1P11387 765 aaKnown RBP8.74□□□□□ -1.01
CNKSR3-202ENST00000433165 ATP1A3P13637 1013 aa8.74□□□□□ -1.01
CNKSR3-202ENST00000433165 SCRN1Q12765 414 aa8.74□□□□□ -1.01
CNKSR3-202ENST00000433165 CASP8Q14790 479 aa8.74□□□□□ -1.01
CNKSR3-202ENST00000433165 HSP90B2PQ58FF3 399 aa8.74□□□□□ -1.01
CNKSR3-202ENST00000433165 PNKPQ96T60 521 aa8.74□□□□□ -1.01
CNKSR3-202ENST00000433165 GBP3Q9H0R5 595 aa8.74□□□□□ -1.01
CNKSR3-202ENST00000433165 ABCB6Q9NP58 842 aa8.74□□□□□ -1.01
CNKSR3-202ENST00000433165 ABT1Q9ULW3 272 aaKnown RBP8.74□□□□□ -1.01
CNKSR3-202ENST00000433165 SALL1Q9NSC2 1324 aa8.74□□□□□ -1.01
CNKSR3-202ENST00000433165 A0A1B0GVL5 298 aa8.74□□□□□ -1.01
CNKSR3-202ENST00000433165 CIAO1O76071 339 aa8.74□□□□□ -1.01
CNKSR3-202ENST00000433165 IL1R1P14778 569 aa8.74□□□□□ -1.01
CNKSR3-202ENST00000433165 FKBP1BP68106 108 aa8.74□□□□□ -1.01
CNKSR3-202ENST00000433165 DEFB115Q30KQ5 88 aa8.74□□□□□ -1.01
CNKSR3-202ENST00000433165 TTLL5Q6EMB2 1281 aa8.74□□□□□ -1.01
CNKSR3-202ENST00000433165 VPS37DQ86XT2 251 aa8.74□□□□□ -1.01
CNKSR3-202ENST00000433165 AIDAQ96BJ3 306 aa8.74□□□□□ -1.01
CNKSR3-202ENST00000433165 BAG1Q99933 345 aaPredicted RBP8.74□□□□□ -1.01
CNKSR3-202ENST00000433165 ACBD3Q9H3P7 528 aa8.74□□□□□ -1.01
CNKSR3-202ENST00000433165 CD209Q9NNX6 404 aa8.74□□□□□ -1.01
CNKSR3-202ENST00000433165 ANKRD65E5RJM6 399 aa8.73□□□□□ -1.01
CNKSR3-202ENST00000433165 CTDNEP1O95476 244 aa8.73□□□□□ -1.01
CNKSR3-202ENST00000433165 IFIT1P09914 478 aaKnown RBP8.73□□□□□ -1.01
CNKSR3-202ENST00000433165 NF2P35240 595 aa8.73□□□□□ -1.01
CNKSR3-202ENST00000433165 AARSP49588 968 aaKnown RBP eCLIP8.73□□□□□ -1.01
CNKSR3-202ENST00000433165 MYL5Q02045 173 aa8.73□□□□□ -1.01
CNKSR3-202ENST00000433165 CFAP100Q494V2 611 aa8.73□□□□□ -1.01
CNKSR3-202ENST00000433165 METTL24Q5JXM2 366 aa8.73□□□□□ -1.01
CNKSR3-202ENST00000433165 DACT2Q5SW24 774 aa8.73□□□□□ -1.01
CNKSR3-202ENST00000433165 MICALL1Q8N3F8 863 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms