RNA–Protein interactions for RNA: ENST00000432581.2

PRKDC-203, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-203ENST00000432581 SHCBP1Q8NEM2 672 aa18■□□□□ 0.47
PRKDC-203ENST00000432581 SDR42E1Q8WUS8 393 aa18■□□□□ 0.47
PRKDC-203ENST00000432581 DNAJC2Q99543 621 aaKnown RBP18■□□□□ 0.47
PRKDC-203ENST00000432581 MOV10L1Q9BXT6 1211 aaKnown RBP18■□□□□ 0.47
PRKDC-203ENST00000432581 SENP6Q9GZR1 1112 aaPredicted RBP18■□□□□ 0.47
PRKDC-203ENST00000432581 SPATC1LQ9H0A9 340 aa18■□□□□ 0.47
PRKDC-203ENST00000432581 TCRBV5S4A2TA0A5A2 114 aa17.99■□□□□ 0.47
PRKDC-203ENST00000432581 IGHA2P01877 340 aa17.99■□□□□ 0.47
PRKDC-203ENST00000432581 ADORA2AP29274 412 aa17.99■□□□□ 0.47
PRKDC-203ENST00000432581 CYP2C19P33261 490 aa17.99■□□□□ 0.47
PRKDC-203ENST00000432581 LCORLQ8N3X6 602 aa17.99■□□□□ 0.47
PRKDC-203ENST00000432581 SH2D4AQ9H788 454 aa17.99■□□□□ 0.47
PRKDC-203ENST00000432581 SLC5A4Q9NY91 659 aa17.99■□□□□ 0.47
PRKDC-203ENST00000432581 CYBAP13498 195 aa17.98■□□□□ 0.47
PRKDC-203ENST00000432581 MDM2Q00987 491 aaPredicted RBP17.98■□□□□ 0.47
PRKDC-203ENST00000432581 LBHD1Q9BQE6 289 aaPredicted RBP17.98■□□□□ 0.47
PRKDC-203ENST00000432581 ARHGEF10LQ9HCE6 1279 aa17.98■□□□□ 0.47
PRKDC-203ENST00000432581 ATP8A2Q9NTI2 1148 aa17.98■□□□□ 0.47
PRKDC-203ENST00000432581 APBB1O00213 710 aa17.97■□□□□ 0.47
PRKDC-203ENST00000432581 DLL1O00548 723 aa17.97■□□□□ 0.47
PRKDC-203ENST00000432581 RAB11FIP3O75154 756 aa17.97■□□□□ 0.47
PRKDC-203ENST00000432581 ERCC3P19447 782 aa17.97■□□□□ 0.47
PRKDC-203ENST00000432581 DSG3P32926 999 aa17.97■□□□□ 0.47
PRKDC-203ENST00000432581 EVX2Q03828 476 aa17.97■□□□□ 0.47
PRKDC-203ENST00000432581 Q7L0L9 218 aa17.97■□□□□ 0.47
PRKDC-203ENST00000432581 ABRAQ8N0Z2 381 aa17.97■□□□□ 0.47
PRKDC-203ENST00000432581 SLC44A5Q8NCS7 719 aa17.97■□□□□ 0.47
PRKDC-203ENST00000432581 ARRDC4Q8NCT1 418 aa17.97■□□□□ 0.47
PRKDC-203ENST00000432581 TRPV1Q8NER1 839 aa17.97■□□□□ 0.47
PRKDC-203ENST00000432581 MROH8Q9H579 483 aa17.97■□□□□ 0.47
PRKDC-203ENST00000432581 MTMR10Q9NXD2 777 aa17.97■□□□□ 0.47
PRKDC-203ENST00000432581 PRKAG2Q9UGJ0 569 aa17.97■□□□□ 0.47
PRKDC-203ENST00000432581 STXBP5LQ9Y2K9 1186 aa17.97■□□□□ 0.47
PRKDC-203ENST00000432581 ZBED9Q6R2W3 1325 aa17.97■□□□□ 0.47
PRKDC-203ENST00000432581 CYP2D6P10635 497 aa17.96■□□□□ 0.47
PRKDC-203ENST00000432581 ICA1Q05084 483 aa17.96■□□□□ 0.47
PRKDC-203ENST00000432581 AMOTL1Q8IY63 956 aa17.96■□□□□ 0.47
PRKDC-203ENST00000432581 CCDC17Q96LX7 622 aa17.96■□□□□ 0.47
PRKDC-203ENST00000432581 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.96■□□□□ 0.47
PRKDC-203ENST00000432581 ARMT1Q9H993 441 aa17.96■□□□□ 0.47
PRKDC-203ENST00000432581 PAG1Q9NWQ8 432 aa17.96■□□□□ 0.47
PRKDC-203ENST00000432581 DDX19BQ9UMR2 479 aa17.96■□□□□ 0.47
PRKDC-203ENST00000432581 TMX2Q9Y320 296 aa17.96■□□□□ 0.47
PRKDC-203ENST00000432581 NAV1Q8NEY1 1877 aa17.95■□□□□ 0.46
PRKDC-203ENST00000432581 KBTBD13C9JR72 458 aa17.95■□□□□ 0.46
PRKDC-203ENST00000432581 FLOT1O75955 427 aa17.95■□□□□ 0.46
PRKDC-203ENST00000432581 MBD4O95243 580 aa17.95■□□□□ 0.46
PRKDC-203ENST00000432581 ADD2P35612 726 aa17.95■□□□□ 0.46
PRKDC-203ENST00000432581 ATN1P54259 1190 aaPredicted RBP17.95■□□□□ 0.46
PRKDC-203ENST00000432581 DYNLL2Q96FJ2 89 aa17.95■□□□□ 0.46
PRKDC-203ENST00000432581 DDRGK1Q96HY6 314 aa17.95■□□□□ 0.46
PRKDC-203ENST00000432581 VCPKMTQ9H867 229 aa17.95■□□□□ 0.46
PRKDC-203ENST00000432581 COL6A3P12111 3177 aa17.95■□□□□ 0.46
PRKDC-203ENST00000432581 ZNF236Q9UL36 1845 aa17.94■□□□□ 0.46
PRKDC-203ENST00000432581 WDR46O15213 610 aaKnown RBP17.94■□□□□ 0.46
PRKDC-203ENST00000432581 SEPT4O43236 478 aa17.94■□□□□ 0.46
PRKDC-203ENST00000432581 AKR1B1P15121 316 aa17.94■□□□□ 0.46
PRKDC-203ENST00000432581 ATP5JP18859 108 aa17.94■□□□□ 0.46
PRKDC-203ENST00000432581 RTP1P59025 263 aa17.94■□□□□ 0.46
PRKDC-203ENST00000432581 PLS1Q14651 629 aa17.94■□□□□ 0.46
PRKDC-203ENST00000432581 KIAA1755Q5JYT7 1200 aa17.94■□□□□ 0.46
PRKDC-203ENST00000432581 NCAPG2Q86XI2 1143 aa17.94■□□□□ 0.46
PRKDC-203ENST00000432581 ATG4CQ96DT6 458 aa17.94■□□□□ 0.46
PRKDC-203ENST00000432581 BOLA2Q9H3K6 86 aa17.94■□□□□ 0.46
PRKDC-203ENST00000432581 CHMP4BQ9H444 224 aaKnown RBP17.94■□□□□ 0.46
PRKDC-203ENST00000432581 ZBTB40Q9NUA8 1239 aa17.94■□□□□ 0.46
PRKDC-203ENST00000432581 CUL9Q8IWT3 2517 aa17.93■□□□□ 0.46
PRKDC-203ENST00000432581 PRKAB2O43741 272 aa17.93■□□□□ 0.46
PRKDC-203ENST00000432581 COBLO75128 1261 aa17.93■□□□□ 0.46
PRKDC-203ENST00000432581 SLC25A27O95847 323 aa17.93■□□□□ 0.46
PRKDC-203ENST00000432581 FCER1AP12319 257 aa17.93■□□□□ 0.46
PRKDC-203ENST00000432581 GJC2Q5T442 439 aaPredicted RBP17.93■□□□□ 0.46
PRKDC-203ENST00000432581 C12orf60Q5U649 245 aa17.93■□□□□ 0.46
PRKDC-203ENST00000432581 SIAH1Q8IUQ4 282 aa17.93■□□□□ 0.46
PRKDC-203ENST00000432581 SIRT2Q8IXJ6 389 aa17.93■□□□□ 0.46
PRKDC-203ENST00000432581 SPICE1Q8N0Z3 855 aa17.93■□□□□ 0.46
PRKDC-203ENST00000432581 HAUS7Q99871 368 aa17.93■□□□□ 0.46
PRKDC-203ENST00000432581 BCL11AQ9H165 835 aa17.93■□□□□ 0.46
PRKDC-203ENST00000432581 CDK8P49336 464 aa17.92■□□□□ 0.46
PRKDC-203ENST00000432581 UBE3CQ15386 1083 aa17.92■□□□□ 0.46
PRKDC-203ENST00000432581 FAM109BQ6ICB4 259 aaPredicted RBP17.92■□□□□ 0.46
PRKDC-203ENST00000432581 SLC39A5Q6ZMH5 540 aa17.92■□□□□ 0.46
PRKDC-203ENST00000432581 C16orf86Q6ZW13 317 aa17.92■□□□□ 0.46
PRKDC-203ENST00000432581 CLEC10AQ8IUN9 316 aa17.92■□□□□ 0.46
PRKDC-203ENST00000432581 MIER1Q8N108 512 aa17.92■□□□□ 0.46
PRKDC-203ENST00000432581 NRBP1Q9UHY1 535 aa17.92■□□□□ 0.46
PRKDC-203ENST00000432581 ATP11BQ9Y2G3 1177 aa17.92■□□□□ 0.46
PRKDC-203ENST00000432581 USP17L12C9JPN9 530 aa17.91■□□□□ 0.46
PRKDC-203ENST00000432581 USP17L21D6R901 530 aa17.91■□□□□ 0.46
PRKDC-203ENST00000432581 ZSCAN25Q6NSZ9 544 aa17.91■□□□□ 0.46
PRKDC-203ENST00000432581 MAML3Q96JK9 1138 aa17.91■□□□□ 0.46
PRKDC-203ENST00000432581 KANSL2Q9H9L4 492 aa17.91■□□□□ 0.46
PRKDC-203ENST00000432581 COG6Q9Y2V7 657 aa17.91■□□□□ 0.46
PRKDC-203ENST00000432581 FRMPD3Q5JV73 1810 aa17.91■□□□□ 0.46
PRKDC-203ENST00000432581 A0A0G2JMZ2 1700 aa17.9■□□□□ 0.46
PRKDC-203ENST00000432581 POTEB2H3BUK9 544 aa17.9■□□□□ 0.46
PRKDC-203ENST00000432581 TMEM132BQ14DG7 1078 aa17.9■□□□□ 0.46
PRKDC-203ENST00000432581 SNX17Q15036 470 aa17.9■□□□□ 0.46
PRKDC-203ENST00000432581 SLFNL1Q499Z3 407 aa17.9■□□□□ 0.46
PRKDC-203ENST00000432581 ANO1Q5XXA6 986 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms