RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 LRRFIP1Q32MZ4 808 aaKnown RBP5.73□□□□□ -1.49
CLK1-204ENST00000432425 FLAD1Q8NFF5 587 aa5.73□□□□□ -1.49
CLK1-204ENST00000432425 MRRFQ96E11 262 aaKnown RBP5.73□□□□□ -1.49
CLK1-204ENST00000432425 CCDC120Q96HB5 630 aa5.73□□□□□ -1.49
CLK1-204ENST00000432425 FMNL2Q96PY5 1086 aa5.73□□□□□ -1.49
CLK1-204ENST00000432425 GPR62Q9BZJ7 368 aa5.73□□□□□ -1.49
CLK1-204ENST00000432425 NLRC3Q7RTR2 1065 aa5.72□□□□□ -1.49
CLK1-204ENST00000432425 CREG2Q8IUH2 290 aa5.72□□□□□ -1.49
CLK1-204ENST00000432425 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.72□□□□□ -1.49
CLK1-204ENST00000432425 DUSP15Q9H1R2 295 aaPredicted RBP5.72□□□□□ -1.49
CLK1-204ENST00000432425 DUSP13Q9UII6 198 aa5.72□□□□□ -1.49
CLK1-204ENST00000432425 LRRN2O75325 713 aa5.72□□□□□ -1.49
CLK1-204ENST00000432425 CDCP2Q5VXM1 449 aa5.72□□□□□ -1.49
CLK1-204ENST00000432425 TMEM40Q8WWA1 233 aa5.72□□□□□ -1.49
CLK1-204ENST00000432425 FAM168AQ92567 244 aa5.72□□□□□ -1.49
CLK1-204ENST00000432425 ATG4CQ96DT6 458 aa5.72□□□□□ -1.49
CLK1-204ENST00000432425 ALPK1Q96QP1 1244 aa5.72□□□□□ -1.49
CLK1-204ENST00000432425 ASCC2Q9H1I8 757 aaPredicted RBP5.72□□□□□ -1.49
CLK1-204ENST00000432425 CNNM2Q9H8M5 875 aa5.72□□□□□ -1.49
CLK1-204ENST00000432425 SLAMF8Q9P0V8 285 aa5.72□□□□□ -1.49
CLK1-204ENST00000432425 DDX41Q9UJV9 622 aaKnown RBP5.72□□□□□ -1.49
CLK1-204ENST00000432425 CTNND2Q9UQB3 1225 aa5.72□□□□□ -1.49
CLK1-204ENST00000432425 CCDC9Q9Y3X0 531 aaKnown RBP5.72□□□□□ -1.49
CLK1-204ENST00000432425 UBOX5O94941 541 aa5.71□□□□□ -1.5
CLK1-204ENST00000432425 LTKP29376 864 aa5.71□□□□□ -1.5
CLK1-204ENST00000432425 AFMP43652 599 aa5.71□□□□□ -1.5
CLK1-204ENST00000432425 RAD51AP2Q09MP3 1159 aa5.71□□□□□ -1.5
CLK1-204ENST00000432425 CLEC16AQ2KHT3 1053 aa5.71□□□□□ -1.5
CLK1-204ENST00000432425 TSPYL5Q86VY4 417 aaPredicted RBP5.71□□□□□ -1.5
CLK1-204ENST00000432425 KRTAP19-1Q8IUB9 90 aa5.71□□□□□ -1.5
CLK1-204ENST00000432425 ZNF654Q8IZM8 581 aa5.71□□□□□ -1.5
CLK1-204ENST00000432425 WASH4PA8MWX3 477 aa5.7□□□□□ -1.5
CLK1-204ENST00000432425 ESR1P03372 595 aa5.7□□□□□ -1.5
CLK1-204ENST00000432425 SRFP11831 508 aa5.7□□□□□ -1.5
CLK1-204ENST00000432425 POLR2BP30876 1174 aaKnown RBP5.7□□□□□ -1.5
CLK1-204ENST00000432425 CCNFP41002 786 aa5.7□□□□□ -1.5
CLK1-204ENST00000432425 RGS22Q8NE09 1264 aa5.7□□□□□ -1.5
CLK1-204ENST00000432425 FERD3LQ96RJ6 166 aa5.7□□□□□ -1.5
CLK1-204ENST00000432425 MEIS3P2A8K0S8 358 aa5.69□□□□□ -1.5
CLK1-204ENST00000432425 CLEC3AO75596 197 aa5.69□□□□□ -1.5
CLK1-204ENST00000432425 IMPDH2P12268 514 aa5.69□□□□□ -1.5
CLK1-204ENST00000432425 NME1P15531 152 aaKnown RBP5.69□□□□□ -1.5
CLK1-204ENST00000432425 GDNFP39905 211 aa5.69□□□□□ -1.5
CLK1-204ENST00000432425 RACK1P63244 317 aaKnown RBP5.69□□□□□ -1.5
CLK1-204ENST00000432425 EGR3Q06889 387 aa5.69□□□□□ -1.5
CLK1-204ENST00000432425 KCNMB1Q16558 191 aa5.69□□□□□ -1.5
CLK1-204ENST00000432425 GAB4Q2WGN9 574 aa5.69□□□□□ -1.5
CLK1-204ENST00000432425 ZSWIM9Q86XI8 627 aa5.69□□□□□ -1.5
CLK1-204ENST00000432425 SYTL4Q96C24 671 aaPredicted RBP5.69□□□□□ -1.5
CLK1-204ENST00000432425 ANTXR1Q9H6X2 564 aa5.69□□□□□ -1.5
CLK1-204ENST00000432425 NBPF12Q5TAG4 269 aaPredicted RBP5.69□□□□□ -1.5
CLK1-204ENST00000432425 TTC6Q86TZ1 520 aa5.69□□□□□ -1.5
CLK1-204ENST00000432425 VWCEQ96DN2 955 aa5.69□□□□□ -1.5
CLK1-204ENST00000432425 TMEM59LQ9UK28 342 aa5.69□□□□□ -1.5
CLK1-204ENST00000432425 ZNRF3Q9ULT6 936 aa5.69□□□□□ -1.5
CLK1-204ENST00000432425 CARMIL2Q6F5E8 1435 aa5.68□□□□□ -1.5
CLK1-204ENST00000432425 TNFRSF10CO14798 259 aa5.68□□□□□ -1.5
CLK1-204ENST00000432425 RAC2P15153 192 aa5.68□□□□□ -1.5
CLK1-204ENST00000432425 FBXW10Q5XX13 1052 aa5.68□□□□□ -1.5
CLK1-204ENST00000432425 METTL16Q86W50 562 aaKnown RBP5.68□□□□□ -1.5
CLK1-204ENST00000432425 KIRREL1Q96J84 757 aa5.68□□□□□ -1.5
CLK1-204ENST00000432425 KIAA1522Q9P206 1035 aaPredicted RBP5.68□□□□□ -1.5
CLK1-204ENST00000432425 DNAJC25-GNG10A0A024R161 153 aa5.67□□□□□ -1.5
CLK1-204ENST00000432425 SHISA3A0PJX4 238 aa5.67□□□□□ -1.5
CLK1-204ENST00000432425 UNCXA6NJT0 531 aa5.67□□□□□ -1.5
CLK1-204ENST00000432425 HK2P52789 917 aa5.67□□□□□ -1.5
CLK1-204ENST00000432425 HDLBPQ00341 1268 aaKnown RBP5.67□□□□□ -1.5
CLK1-204ENST00000432425 PAK2Q13177 524 aa5.67□□□□□ -1.5
CLK1-204ENST00000432425 NMIQ13287 307 aaPredicted RBP5.67□□□□□ -1.5
CLK1-204ENST00000432425 RALGPS1Q5JS13 557 aa5.67□□□□□ -1.5
CLK1-204ENST00000432425 OGFOD2Q6N063 350 aa5.67□□□□□ -1.5
CLK1-204ENST00000432425 NT5DC4Q86YG4 428 aa5.67□□□□□ -1.5
CLK1-204ENST00000432425 ENOX1Q8TC92 643 aaKnown RBP5.67□□□□□ -1.5
CLK1-204ENST00000432425 ZNF512BQ96KM6 892 aaPredicted RBP5.67□□□□□ -1.5
CLK1-204ENST00000432425 SPATA32Q96LK8 384 aa5.67□□□□□ -1.5
CLK1-204ENST00000432425 SLC6A18Q96N87 628 aa5.67□□□□□ -1.5
CLK1-204ENST00000432425 MKRN2Q9H000 416 aaKnown RBP5.67□□□□□ -1.5
CLK1-204ENST00000432425 C19orf73Q9NVV2 129 aa5.67□□□□□ -1.5
CLK1-204ENST00000432425 PCDHA11Q9Y5I1 949 aa5.67□□□□□ -1.5
CLK1-204ENST00000432425 COL9A2Q14055 689 aaPredicted RBP5.66□□□□□ -1.5
CLK1-204ENST00000432425 NBPF9Q3BBW0 867 aa5.66□□□□□ -1.5
CLK1-204ENST00000432425 C9orf131Q5VYM1 1079 aa5.66□□□□□ -1.5
CLK1-204ENST00000432425 SYTL5Q8TDW5 730 aaPredicted RBP5.66□□□□□ -1.5
CLK1-204ENST00000432425 DHX38Q92620 1227 aaKnown RBP5.66□□□□□ -1.5
CLK1-204ENST00000432425 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.66□□□□□ -1.5
CLK1-204ENST00000432425 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.66□□□□□ -1.5
CLK1-204ENST00000432425 FAM86C2PA6NEL3 165 aa5.66□□□□□ -1.5
CLK1-204ENST00000432425 TMEM67Q5HYA8 995 aa5.66□□□□□ -1.5
CLK1-204ENST00000432425 FYB2Q5VWT5 728 aa5.66□□□□□ -1.5
CLK1-204ENST00000432425 TMEM192Q8IY95 271 aa5.66□□□□□ -1.5
CLK1-204ENST00000432425 DHRS1Q96LJ7 313 aa5.66□□□□□ -1.5
CLK1-204ENST00000432425 SLC9A7Q96T83 725 aa5.66□□□□□ -1.5
CLK1-204ENST00000432425 TM9SF2Q99805 663 aa5.66□□□□□ -1.5
CLK1-204ENST00000432425 ADAMTS10Q9H324 1103 aa5.66□□□□□ -1.5
CLK1-204ENST00000432425 FAM53CQ9NYF3 392 aa5.66□□□□□ -1.5
CLK1-204ENST00000432425 PPT2Q9UMR5 302 aa5.66□□□□□ -1.5
CLK1-204ENST00000432425 SSU72P8A0A1W2PR75 194 aa5.65□□□□□ -1.51
CLK1-204ENST00000432425 GLI1P08151 1106 aa5.65□□□□□ -1.51
CLK1-204ENST00000432425 INTS3Q68E01 1043 aaKnown RBP5.65□□□□□ -1.51
CLK1-204ENST00000432425 MPZL3Q6UWV2 235 aa5.65□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms