RNA–Protein interactions for RNA: ENST00000431918.1

CLDN4-202, Transcript of claudin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN4, Length 4,108 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-202ENST00000431918 PPP1R1BQ9UD71 204 aaPredicted RBP12.94□□□□□ -0.34
CLDN4-202ENST00000431918 CCP110O43303 1012 aa12.93□□□□□ -0.34
CLDN4-202ENST00000431918 IPO7O95373 1038 aaKnown RBP12.93□□□□□ -0.34
CLDN4-202ENST00000431918 PLCG2P16885 1265 aa12.93□□□□□ -0.34
CLDN4-202ENST00000431918 TNNI2P48788 182 aa12.93□□□□□ -0.34
CLDN4-202ENST00000431918 BLIDQ8IZY5 108 aa12.93□□□□□ -0.34
CLDN4-202ENST00000431918 RRP36Q96EU6 259 aaKnown RBP12.93□□□□□ -0.34
CLDN4-202ENST00000431918 GJD4Q96KN9 370 aaPredicted RBP12.93□□□□□ -0.34
CLDN4-202ENST00000431918 NUP88Q99567 741 aaPredicted RBP12.93□□□□□ -0.34
CLDN4-202ENST00000431918 TTF2Q9UNY4 1162 aaKnown RBP12.93□□□□□ -0.34
CLDN4-202ENST00000431918 PRPF3O43395 683 aaKnown RBP12.93□□□□□ -0.34
CLDN4-202ENST00000431918 PTPREP23469 700 aa12.93□□□□□ -0.34
CLDN4-202ENST00000431918 U2AF2P26368 475 aaKnown RBP eCLIP12.93□□□□□ -0.34
CLDN4-202ENST00000431918 ADKP55263 362 aaKnown RBP12.93□□□□□ -0.34
CLDN4-202ENST00000431918 STK36Q9NRP7 1315 aa12.93□□□□□ -0.34
CLDN4-202ENST00000431918 GNG11P61952 73 aa12.93□□□□□ -0.34
CLDN4-202ENST00000431918 USP17L2Q6R6M4 530 aa12.93□□□□□ -0.34
CLDN4-202ENST00000431918 SRBD1Q8N5C6 995 aaKnown RBP12.93□□□□□ -0.34
CLDN4-202ENST00000431918 MLKLQ8NB16 471 aa12.93□□□□□ -0.34
CLDN4-202ENST00000431918 CCDC12Q8WUD4 166 aaPredicted RBP12.93□□□□□ -0.34
CLDN4-202ENST00000431918 MAN1B1Q9UKM7 699 aa12.93□□□□□ -0.34
CLDN4-202ENST00000431918 KARSQ15046 597 aaKnown RBP12.92□□□□□ -0.34
CLDN4-202ENST00000431918 DPP8Q6V1X1 898 aaPredicted RBP12.92□□□□□ -0.34
CLDN4-202ENST00000431918 CERS3Q8IU89 383 aa12.92□□□□□ -0.34
CLDN4-202ENST00000431918 STAG2Q8N3U4 1231 aa12.92□□□□□ -0.34
CLDN4-202ENST00000431918 VPS16Q9H269 839 aa12.92□□□□□ -0.34
CLDN4-202ENST00000431918 ZSWIM4Q9H7M6 989 aa12.92□□□□□ -0.34
CLDN4-202ENST00000431918 TRPC5Q9UL62 973 aaPredicted RBP12.92□□□□□ -0.34
CLDN4-202ENST00000431918 CCDC66A2RUB6 948 aa12.92□□□□□ -0.34
CLDN4-202ENST00000431918 KRT18P05783 430 aaKnown RBP12.92□□□□□ -0.34
CLDN4-202ENST00000431918 HLA-DOAP06340 250 aa12.92□□□□□ -0.34
CLDN4-202ENST00000431918 ATP2B4P23634 1241 aa12.92□□□□□ -0.34
CLDN4-202ENST00000431918 GPSM2P81274 684 aa12.92□□□□□ -0.34
CLDN4-202ENST00000431918 RBM43Q6ZSC3 357 aaKnown RBP12.92□□□□□ -0.34
CLDN4-202ENST00000431918 METTL16Q86W50 562 aaKnown RBP12.92□□□□□ -0.34
CLDN4-202ENST00000431918 TRIM47Q96LD4 638 aa12.92□□□□□ -0.34
CLDN4-202ENST00000431918 TIGD1Q96MW7 591 aa12.92□□□□□ -0.34
CLDN4-202ENST00000431918 C6orf50Q9HD87 102 aa12.92□□□□□ -0.34
CLDN4-202ENST00000431918 CD209Q9NNX6 404 aa12.92□□□□□ -0.34
CLDN4-202ENST00000431918 PAXBP1Q9Y5B6 917 aa12.92□□□□□ -0.34
CLDN4-202ENST00000431918 CCNT1O60563 726 aaKnown RBP12.92□□□□□ -0.34
CLDN4-202ENST00000431918 SLC51AQ86UW1 340 aa12.92□□□□□ -0.34
CLDN4-202ENST00000431918 FERMT2Q96AC1 680 aa12.92□□□□□ -0.34
CLDN4-202ENST00000431918 BCL2L12Q9HB09 334 aa12.92□□□□□ -0.34
CLDN4-202ENST00000431918 CNTNAP4Q9C0A0 1308 aa12.91□□□□□ -0.34
CLDN4-202ENST00000431918 ZSCAN12O43309 604 aa12.91□□□□□ -0.34
CLDN4-202ENST00000431918 DHX37Q8IY37 1157 aaKnown RBP12.91□□□□□ -0.34
CLDN4-202ENST00000431918 FBXL16Q8N461 479 aa12.91□□□□□ -0.34
CLDN4-202ENST00000431918 SRPRBQ9Y5M8 271 aaKnown RBP12.91□□□□□ -0.34
CLDN4-202ENST00000431918 USP27XA6NNY8 438 aa12.91□□□□□ -0.34
CLDN4-202ENST00000431918 ASIC1P78348 528 aa12.91□□□□□ -0.34
CLDN4-202ENST00000431918 NOM1Q5C9Z4 860 aaKnown RBP12.91□□□□□ -0.34
CLDN4-202ENST00000431918 PRR5LQ6MZQ0 368 aa12.91□□□□□ -0.34
CLDN4-202ENST00000431918 SAMSN1Q9NSI8 373 aaKnown RBP12.91□□□□□ -0.34
CLDN4-202ENST00000431918 BIN2Q9UBW5 565 aaPredicted RBP12.91□□□□□ -0.34
CLDN4-202ENST00000431918 TACC3Q9Y6A5 838 aa12.91□□□□□ -0.34
CLDN4-202ENST00000431918 SYNRGQ9UMZ2 1314 aa12.91□□□□□ -0.34
CLDN4-202ENST00000431918 ABCC6O95255 1503 aa12.91□□□□□ -0.34
CLDN4-202ENST00000431918 PTPAQ15257 358 aa12.91□□□□□ -0.34
CLDN4-202ENST00000431918 ARHGAP29Q52LW3 1261 aa12.91□□□□□ -0.34
CLDN4-202ENST00000431918 KIAA0825Q8IV33 1275 aa12.91□□□□□ -0.34
CLDN4-202ENST00000431918 TANGO6Q9C0B7 1094 aa12.91□□□□□ -0.34
CLDN4-202ENST00000431918 APBA3O96018 575 aa12.9□□□□□ -0.34
CLDN4-202ENST00000431918 PCP11498 1178 aaKnown RBP12.9□□□□□ -0.34
CLDN4-202ENST00000431918 ERCC3P19447 782 aa12.9□□□□□ -0.34
CLDN4-202ENST00000431918 TXKP42681 527 aa12.9□□□□□ -0.34
CLDN4-202ENST00000431918 USP40Q9NVE5 1235 aa12.9□□□□□ -0.34
CLDN4-202ENST00000431918 PARP3Q9Y6F1 533 aa12.9□□□□□ -0.34
CLDN4-202ENST00000431918 SMCO2A6NFE2 343 aa12.9□□□□□ -0.34
CLDN4-202ENST00000431918 TMEM232C9JQI7 657 aa12.9□□□□□ -0.34
CLDN4-202ENST00000431918 SARM1Q6SZW1 724 aa12.9□□□□□ -0.34
CLDN4-202ENST00000431918 KIF2AO00139 706 aaPredicted RBP12.9□□□□□ -0.34
CLDN4-202ENST00000431918 TOB1P50616 345 aaPredicted RBP12.9□□□□□ -0.34
CLDN4-202ENST00000431918 RC3H1Q5TC82 1133 aaKnown RBP12.9□□□□□ -0.34
CLDN4-202ENST00000431918 UBXN4Q92575 508 aa12.9□□□□□ -0.34
CLDN4-202ENST00000431918 DPF2Q92785 391 aa12.9□□□□□ -0.34
CLDN4-202ENST00000431918 BAG1Q99933 345 aaPredicted RBP12.9□□□□□ -0.34
CLDN4-202ENST00000431918 LZTFL1Q9NQ48 299 aa12.9□□□□□ -0.34
CLDN4-202ENST00000431918 CALML4Q96GE6 196 aa12.9□□□□□ -0.35
CLDN4-202ENST00000431918 IMPACTQ9P2X3 320 aa12.9□□□□□ -0.35
CLDN4-202ENST00000431918 FBXO2Q9UK22 296 aaPredicted RBP12.9□□□□□ -0.35
CLDN4-202ENST00000431918 SIPA1L3O60292 1781 aaPredicted RBP12.9□□□□□ -0.35
CLDN4-202ENST00000431918 GNA11P29992 359 aa12.89□□□□□ -0.35
CLDN4-202ENST00000431918 PLCD1P51178 756 aa12.89□□□□□ -0.35
CLDN4-202ENST00000431918 TROAPQ12815 778 aa12.89□□□□□ -0.35
CLDN4-202ENST00000431918 ZBTB9Q96C00 473 aa12.89□□□□□ -0.35
CLDN4-202ENST00000431918 TRERF1Q96PN7 1200 aa12.89□□□□□ -0.35
CLDN4-202ENST00000431918 CDC25BP30305 580 aa12.89□□□□□ -0.35
CLDN4-202ENST00000431918 GPIHBP1Q8IV16 184 aa12.89□□□□□ -0.35
CLDN4-202ENST00000431918 IGSF22Q8N9C0 903 aa12.89□□□□□ -0.35
CLDN4-202ENST00000431918 DBNDD1Q9H9R9 158 aa12.89□□□□□ -0.35
CLDN4-202ENST00000431918 TAB2Q9NYJ8 693 aa12.89□□□□□ -0.35
CLDN4-202ENST00000431918 PKD1L3Q7Z443 1732 aa12.89□□□□□ -0.35
CLDN4-202ENST00000431918 MTIF2P46199 727 aaKnown RBP12.89□□□□□ -0.35
CLDN4-202ENST00000431918 CDK8P49336 464 aa12.89□□□□□ -0.35
CLDN4-202ENST00000431918 SEC23AQ15436 765 aa12.89□□□□□ -0.35
CLDN4-202ENST00000431918 TMEM266Q2M3C6 531 aa12.89□□□□□ -0.35
CLDN4-202ENST00000431918 TMEM47Q9BQJ4 181 aa12.89□□□□□ -0.35
CLDN4-202ENST00000431918 DESI2Q9BSY9 194 aa12.89□□□□□ -0.35
CLDN4-202ENST00000431918 CACNB3P54284 484 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms