RNA–Protein interactions for RNA: ENST00000431275.1

SPTLC3-202, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

TSL 2

Gene SPTLC3, Length 453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-202ENST00000431275 USP17L17D6RBQ6 530 aa13.11□□□□□ -0.31
SPTLC3-202ENST00000431275 USP17L19D6RCP7 530 aa13.11□□□□□ -0.31
SPTLC3-202ENST00000431275 USP17L20D6RJB6 530 aa13.11□□□□□ -0.31
SPTLC3-202ENST00000431275 E7EWF7 191 aa13.11□□□□□ -0.31
SPTLC3-202ENST00000431275 KDM4AO75164 1064 aa13.11□□□□□ -0.31
SPTLC3-202ENST00000431275 VCAM1P19320 739 aa13.11□□□□□ -0.31
SPTLC3-202ENST00000431275 NOVP48745 357 aa13.11□□□□□ -0.31
SPTLC3-202ENST00000431275 USP17L24Q0WX57 530 aa13.11□□□□□ -0.31
SPTLC3-202ENST00000431275 PPP4R3BQ5MIZ7 849 aa13.11□□□□□ -0.31
SPTLC3-202ENST00000431275 CREB3L3Q68CJ9 461 aa13.11□□□□□ -0.31
SPTLC3-202ENST00000431275 C17orf99Q6UX52 265 aa13.11□□□□□ -0.31
SPTLC3-202ENST00000431275 CATSPERGQ6ZRH7 1159 aa13.11□□□□□ -0.31
SPTLC3-202ENST00000431275 SPICE1Q8N0Z3 855 aa13.11□□□□□ -0.31
SPTLC3-202ENST00000431275 ZNF296Q8WUU4 475 aaPredicted RBP13.11□□□□□ -0.31
SPTLC3-202ENST00000431275 LPAR1Q92633 364 aa13.11□□□□□ -0.31
SPTLC3-202ENST00000431275 P2RX7Q99572 595 aaKnown RBP13.11□□□□□ -0.31
SPTLC3-202ENST00000431275 ASCC2Q9H1I8 757 aaPredicted RBP13.11□□□□□ -0.31
SPTLC3-202ENST00000431275 RPAP3Q9H6T3 665 aaPredicted RBP13.11□□□□□ -0.31
SPTLC3-202ENST00000431275 GOPCQ9HD26 462 aa13.11□□□□□ -0.31
SPTLC3-202ENST00000431275 PRDM10Q9NQV6 1147 aa13.11□□□□□ -0.31
SPTLC3-202ENST00000431275 ZSWIM5Q9P217 1185 aa13.11□□□□□ -0.31
SPTLC3-202ENST00000431275 STX8Q9UNK0 236 aa13.11□□□□□ -0.31
SPTLC3-202ENST00000431275 PTPRFP10586 1907 aa13.11□□□□□ -0.31
SPTLC3-202ENST00000431275 GREB1LQ9C091 1923 aaPredicted RBP13.11□□□□□ -0.31
SPTLC3-202ENST00000431275 F5H6K3 240 aa13.1□□□□□ -0.31
SPTLC3-202ENST00000431275 SLC27A2O14975 620 aa13.1□□□□□ -0.31
SPTLC3-202ENST00000431275 RAD21O60216 631 aa13.1□□□□□ -0.31
SPTLC3-202ENST00000431275 FKTNO75072 461 aa13.1□□□□□ -0.31
SPTLC3-202ENST00000431275 IRX3P78415 501 aaPredicted RBP13.1□□□□□ -0.31
SPTLC3-202ENST00000431275 KLRC3Q07444 240 aa13.1□□□□□ -0.31
SPTLC3-202ENST00000431275 TRDNQ13061 729 aa13.1□□□□□ -0.31
SPTLC3-202ENST00000431275 CPA4Q9UI42 421 aa13.1□□□□□ -0.31
SPTLC3-202ENST00000431275 SYNPO2Q9UMS6 1093 aa13.1□□□□□ -0.31
SPTLC3-202ENST00000431275 ADGRA2Q96PE1 1338 aa13.1□□□□□ -0.31
SPTLC3-202ENST00000431275 LOC285556D6RIA3 1793 aa13.09□□□□□ -0.31
SPTLC3-202ENST00000431275 WDR46O15213 610 aaKnown RBP13.09□□□□□ -0.31
SPTLC3-202ENST00000431275 REC8O95072 547 aa13.09□□□□□ -0.31
SPTLC3-202ENST00000431275 SP3Q02447 781 aa13.09□□□□□ -0.31
SPTLC3-202ENST00000431275 STOX1Q6ZVD7 989 aa13.09□□□□□ -0.31
SPTLC3-202ENST00000431275 IQCA1Q86XH1 822 aa13.09□□□□□ -0.31
SPTLC3-202ENST00000431275 LRRC47Q8N1G4 583 aaKnown RBP13.09□□□□□ -0.31
SPTLC3-202ENST00000431275 NCOA7Q8NI08 942 aa13.09□□□□□ -0.31
SPTLC3-202ENST00000431275 SMCR8Q8TEV9 937 aaPredicted RBP13.09□□□□□ -0.31
SPTLC3-202ENST00000431275 TTC14Q96N46 770 aa13.09□□□□□ -0.31
SPTLC3-202ENST00000431275 ZKSCAN3Q9BRR0 538 aa13.09□□□□□ -0.31
SPTLC3-202ENST00000431275 LAMA4Q16363 1823 aa13.09□□□□□ -0.31
SPTLC3-202ENST00000431275 NDUFB10O96000 172 aa13.08□□□□□ -0.32
SPTLC3-202ENST00000431275 BCRP11274 1271 aa13.08□□□□□ -0.32
SPTLC3-202ENST00000431275 GCLCP48506 637 aaPredicted RBP13.08□□□□□ -0.32
SPTLC3-202ENST00000431275 HERVK_113P62684 666 aa13.08□□□□□ -0.32
SPTLC3-202ENST00000431275 COG2Q14746 738 aa13.08□□□□□ -0.32
SPTLC3-202ENST00000431275 CCDC178Q5BJE1 867 aa13.08□□□□□ -0.32
SPTLC3-202ENST00000431275 RNF20Q5VTR2 975 aa13.08□□□□□ -0.32
SPTLC3-202ENST00000431275 SLFN13Q68D06 897 aa13.08□□□□□ -0.32
SPTLC3-202ENST00000431275 RCSD1Q6JBY9 416 aa13.08□□□□□ -0.32
SPTLC3-202ENST00000431275 CYB5R4Q7L1T6 521 aa13.08□□□□□ -0.32
SPTLC3-202ENST00000431275 RALYLQ86SE5 291 aaKnown RBP13.08□□□□□ -0.32
SPTLC3-202ENST00000431275 DGKHQ86XP1 1220 aa13.08□□□□□ -0.32
SPTLC3-202ENST00000431275 GMCL1P1Q8NEA9 526 aa13.08□□□□□ -0.32
SPTLC3-202ENST00000431275 ZSCAN10Q96SZ4 725 aaPredicted RBP13.08□□□□□ -0.32
SPTLC3-202ENST00000431275 TMEM47Q9BQJ4 181 aa13.08□□□□□ -0.32
SPTLC3-202ENST00000431275 TANGO6Q9C0B7 1094 aa13.08□□□□□ -0.32
SPTLC3-202ENST00000431275 PCNTO95613 3336 aa13.08□□□□□ -0.32
SPTLC3-202ENST00000431275 TOP1P11387 765 aaKnown RBP13.07□□□□□ -0.32
SPTLC3-202ENST00000431275 TSGA10IPQ3SY00 556 aa13.07□□□□□ -0.32
SPTLC3-202ENST00000431275 FAM83BQ5T0W9 1011 aa13.07□□□□□ -0.32
SPTLC3-202ENST00000431275 ANKRD13CQ8N6S4 541 aa13.07□□□□□ -0.32
SPTLC3-202ENST00000431275 NUP88Q99567 741 aaPredicted RBP13.07□□□□□ -0.32
SPTLC3-202ENST00000431275 UBAC1Q9BSL1 405 aa13.07□□□□□ -0.32
SPTLC3-202ENST00000431275 HOXC10Q9NYD6 342 aa13.07□□□□□ -0.32
SPTLC3-202ENST00000431275 RBPJLQ9UBG7 517 aa13.07□□□□□ -0.32
SPTLC3-202ENST00000431275 EPB41L2O43491 1005 aaKnown RBP13.06□□□□□ -0.32
SPTLC3-202ENST00000431275 FLOT1O75955 427 aa13.06□□□□□ -0.32
SPTLC3-202ENST00000431275 BMP3P12645 472 aa13.06□□□□□ -0.32
SPTLC3-202ENST00000431275 DSG3P32926 999 aa13.06□□□□□ -0.32
SPTLC3-202ENST00000431275 HSPA4P34932 840 aa13.06□□□□□ -0.32
SPTLC3-202ENST00000431275 POTEEQ6S8J3 1075 aa13.06□□□□□ -0.32
SPTLC3-202ENST00000431275 MB21D2Q8IYB1 491 aaPredicted RBP13.06□□□□□ -0.32
SPTLC3-202ENST00000431275 RASEFQ8IZ41 740 aa13.06□□□□□ -0.32
SPTLC3-202ENST00000431275 ENAHQ8N8S7 591 aaPredicted RBP13.06□□□□□ -0.32
SPTLC3-202ENST00000431275 CD99L2Q8TCZ2 262 aa13.06□□□□□ -0.32
SPTLC3-202ENST00000431275 GTF3C2Q8WUA4 911 aaPredicted RBP13.06□□□□□ -0.32
SPTLC3-202ENST00000431275 ANKS1AQ92625 1134 aa13.06□□□□□ -0.32
SPTLC3-202ENST00000431275 CHMP4CQ96CF2 233 aa13.06□□□□□ -0.32
SPTLC3-202ENST00000431275 ERO1AQ96HE7 468 aa13.06□□□□□ -0.32
SPTLC3-202ENST00000431275 USP26Q9BXU7 913 aa13.06□□□□□ -0.32
SPTLC3-202ENST00000431275 TNKSO95271 1327 aa13.06□□□□□ -0.32
SPTLC3-202ENST00000431275 SPDYE16A6NNV3 312 aaPredicted RBP13.05□□□□□ -0.32
SPTLC3-202ENST00000431275 PEX10O60683 326 aa13.05□□□□□ -0.32
SPTLC3-202ENST00000431275 ZKSCAN1P17029 563 aaPredicted RBP13.05□□□□□ -0.32
SPTLC3-202ENST00000431275 MCCP23508 829 aa13.05□□□□□ -0.32
SPTLC3-202ENST00000431275 ANTXR2P58335 489 aa13.05□□□□□ -0.32
SPTLC3-202ENST00000431275 LACTBP83111 547 aaPredicted RBP13.05□□□□□ -0.32
SPTLC3-202ENST00000431275 SEC23AQ15436 765 aa13.05□□□□□ -0.32
SPTLC3-202ENST00000431275 FAM110CQ1W6H9 321 aa13.05□□□□□ -0.32
SPTLC3-202ENST00000431275 Q3C1V9 767 aa13.05□□□□□ -0.32
SPTLC3-202ENST00000431275 COL13A1Q5TAT6 717 aaPredicted RBP13.05□□□□□ -0.32
SPTLC3-202ENST00000431275 SAMD1Q6SPF0 538 aaPredicted RBP13.05□□□□□ -0.32
SPTLC3-202ENST00000431275 LBX2Q6XYB7 198 aa13.05□□□□□ -0.32
SPTLC3-202ENST00000431275 CHST3Q7LGC8 479 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms