RNA–Protein interactions for RNA: ENST00000430158.5

USP40-205, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 1,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-205ENST00000430158 RANBP6O60518 1105 aaKnown RBP14.69□□□□□ -0.06
USP40-205ENST00000430158 REC8O95072 547 aa14.69□□□□□ -0.06
USP40-205ENST00000430158 TSPY3P0CV98 308 aa14.69□□□□□ -0.06
USP40-205ENST00000430158 TSPY8P0CW00 308 aa14.69□□□□□ -0.06
USP40-205ENST00000430158 HMGCS2P54868 508 aa14.69□□□□□ -0.06
USP40-205ENST00000430158 SREBF2Q12772 1141 aa14.69□□□□□ -0.06
USP40-205ENST00000430158 ASTLQ6HA08 431 aaPredicted RBP14.69□□□□□ -0.06
USP40-205ENST00000430158 CYB5R4Q7L1T6 521 aa14.69□□□□□ -0.06
USP40-205ENST00000430158 ANKRD23Q86SG2 305 aa14.69□□□□□ -0.06
USP40-205ENST00000430158 PROCA1Q8NCQ7 364 aaPredicted RBP14.69□□□□□ -0.06
USP40-205ENST00000430158 ANKS1AQ92625 1134 aa14.69□□□□□ -0.06
USP40-205ENST00000430158 CFHR5Q9BXR6 569 aa14.69□□□□□ -0.06
USP40-205ENST00000430158 RNF186Q9NXI6 227 aa14.69□□□□□ -0.06
USP40-205ENST00000430158 PARP14Q460N5 1801 aa14.69□□□□□ -0.06
USP40-205ENST00000430158 KDM4AO75164 1064 aa14.68□□□□□ -0.06
USP40-205ENST00000430158 ANTXR2P58335 489 aa14.68□□□□□ -0.06
USP40-205ENST00000430158 MAP2K1Q02750 393 aaPredicted RBP14.68□□□□□ -0.06
USP40-205ENST00000430158 RRP12Q5JTH9 1297 aaKnown RBP14.68□□□□□ -0.06
USP40-205ENST00000430158 TREML2Q5T2D2 321 aa14.68□□□□□ -0.06
USP40-205ENST00000430158 USP17L2Q6R6M4 530 aa14.68□□□□□ -0.06
USP40-205ENST00000430158 MB21D2Q8IYB1 491 aaPredicted RBP14.68□□□□□ -0.06
USP40-205ENST00000430158 ESR2Q92731 530 aa14.68□□□□□ -0.06
USP40-205ENST00000430158 MS4A3Q96HJ5 214 aa14.68□□□□□ -0.06
USP40-205ENST00000430158 KRT23Q9C075 422 aa14.68□□□□□ -0.06
USP40-205ENST00000430158 R3HDMLQ9H3Y0 253 aa14.68□□□□□ -0.06
USP40-205ENST00000430158 CNNM2Q9H8M5 875 aa14.68□□□□□ -0.06
USP40-205ENST00000430158 ZCCHC17Q9NP64 241 aaKnown RBP14.68□□□□□ -0.06
USP40-205ENST00000430158 POTEMA6NI47 508 aa14.67□□□□□ -0.06
USP40-205ENST00000430158 TSPY2A6NKD2 308 aa14.67□□□□□ -0.06
USP40-205ENST00000430158 HOXA7P31268 230 aaPredicted RBP14.67□□□□□ -0.06
USP40-205ENST00000430158 SEC23AQ15436 765 aa14.67□□□□□ -0.06
USP40-205ENST00000430158 POTEEQ6S8J3 1075 aa14.67□□□□□ -0.06
USP40-205ENST00000430158 FASTKD5Q7L8L6 764 aaKnown RBP14.67□□□□□ -0.06
USP40-205ENST00000430158 CLIP2Q9UDT6 1046 aa14.67□□□□□ -0.06
USP40-205ENST00000430158 SYNPO2Q9UMS6 1093 aa14.67□□□□□ -0.06
USP40-205ENST00000430158 AGTPBP1Q9UPW5 1226 aa14.67□□□□□ -0.06
USP40-205ENST00000430158 SLC45A1Q9Y2W3 748 aa14.67□□□□□ -0.06
USP40-205ENST00000430158 ADGRA2Q96PE1 1338 aa14.66□□□□□ -0.06
USP40-205ENST00000430158 TTLL1O95922 423 aa14.66□□□□□ -0.06
USP40-205ENST00000430158 USP14P54578 494 aa14.66□□□□□ -0.06
USP40-205ENST00000430158 ADCK5Q3MIX3 580 aa14.66□□□□□ -0.06
USP40-205ENST00000430158 IL17RAQ96F46 866 aa14.66□□□□□ -0.06
USP40-205ENST00000430158 TTC14Q96N46 770 aa14.66□□□□□ -0.06
USP40-205ENST00000430158 VCPKMTQ9H867 229 aa14.66□□□□□ -0.06
USP40-205ENST00000430158 ARHGEF10LQ9HCE6 1279 aa14.66□□□□□ -0.06
USP40-205ENST00000430158 TOMM22Q9NS69 142 aa14.66□□□□□ -0.06
USP40-205ENST00000430158 SAGE1Q9NXZ1 904 aa14.66□□□□□ -0.06
USP40-205ENST00000430158 SNX14Q9Y5W7 946 aa14.66□□□□□ -0.06
USP40-205ENST00000430158 DOCK3Q8IZD9 2030 aa14.65□□□□□ -0.06
USP40-205ENST00000430158 PDHXO00330 501 aa14.65□□□□□ -0.06
USP40-205ENST00000430158 VCAM1P19320 739 aa14.65□□□□□ -0.06
USP40-205ENST00000430158 GADL1Q6ZQY3 521 aa14.65□□□□□ -0.06
USP40-205ENST00000430158 DGKHQ86XP1 1220 aa14.65□□□□□ -0.06
USP40-205ENST00000430158 ENAHQ8N8S7 591 aaPredicted RBP14.65□□□□□ -0.06
USP40-205ENST00000430158 GMCL1P1Q8NEA9 526 aa14.65□□□□□ -0.06
USP40-205ENST00000430158 NCOA7Q8NI08 942 aa14.65□□□□□ -0.06
USP40-205ENST00000430158 IGDCC4Q8TDY8 1250 aa14.65□□□□□ -0.06
USP40-205ENST00000430158 TMEM47Q9BQJ4 181 aa14.65□□□□□ -0.06
USP40-205ENST00000430158 ATMINO43313 823 aaPredicted RBP14.64□□□□□ -0.07
USP40-205ENST00000430158 CA12O43570 354 aa14.64□□□□□ -0.07
USP40-205ENST00000430158 TRPA1O75762 1119 aa14.64□□□□□ -0.07
USP40-205ENST00000430158 NDUFB10O96000 172 aa14.64□□□□□ -0.07
USP40-205ENST00000430158 ALDH1A1P00352 501 aa14.64□□□□□ -0.07
USP40-205ENST00000430158 EXOSC10Q01780 885 aaKnown RBP14.64□□□□□ -0.07
USP40-205ENST00000430158 ZYXQ15942 572 aaKnown RBP14.64□□□□□ -0.07
USP40-205ENST00000430158 RNF20Q5VTR2 975 aa14.64□□□□□ -0.07
USP40-205ENST00000430158 CATSPERGQ6ZRH7 1159 aa14.64□□□□□ -0.07
USP40-205ENST00000430158 LPAR1Q92633 364 aa14.64□□□□□ -0.07
USP40-205ENST00000430158 ZSCAN10Q96SZ4 725 aaPredicted RBP14.64□□□□□ -0.07
USP40-205ENST00000430158 FEZ1Q99689 392 aa14.64□□□□□ -0.07
USP40-205ENST00000430158 ZKSCAN3Q9BRR0 538 aa14.64□□□□□ -0.07
USP40-205ENST00000430158 SENP2Q9HC62 589 aa14.64□□□□□ -0.07
USP40-205ENST00000430158 TMOD4Q9NZQ9 345 aa14.64□□□□□ -0.07
USP40-205ENST00000430158 CASP8AP2Q9UKL3 1982 aa14.64□□□□□ -0.07
USP40-205ENST00000430158 F5H6K3 240 aa14.63□□□□□ -0.07
USP40-205ENST00000430158 FOXN1O15353 648 aa14.63□□□□□ -0.07
USP40-205ENST00000430158 TOP1P11387 765 aaKnown RBP14.63□□□□□ -0.07
USP40-205ENST00000430158 ATP2B2Q01814 1243 aa14.63□□□□□ -0.07
USP40-205ENST00000430158 KLRC3Q07444 240 aa14.63□□□□□ -0.07
USP40-205ENST00000430158 CRHR2Q13324 411 aa14.63□□□□□ -0.07
USP40-205ENST00000430158 PPP4R3BQ5MIZ7 849 aa14.63□□□□□ -0.07
USP40-205ENST00000430158 OTUD7BQ6GQQ9 843 aa14.63□□□□□ -0.07
USP40-205ENST00000430158 LRRC47Q8N1G4 583 aaKnown RBP14.63□□□□□ -0.07
USP40-205ENST00000430158 MTA3Q9BTC8 594 aa14.63□□□□□ -0.07
USP40-205ENST00000430158 SH2D4AQ9H788 454 aa14.63□□□□□ -0.07
USP40-205ENST00000430158 GPHNQ9NQX3 736 aaPredicted RBP14.63□□□□□ -0.07
USP40-205ENST00000430158 METRNQ9UJH8 293 aa14.63□□□□□ -0.07
USP40-205ENST00000430158 SMCHD1A6NHR9 2005 aa14.62□□□□□ -0.07
USP40-205ENST00000430158 TBC1D8O95759 1140 aa14.62□□□□□ -0.07
USP40-205ENST00000430158 HSPA1AP0DMV8 641 aaKnown RBP14.62□□□□□ -0.07
USP40-205ENST00000430158 HSPA1BP0DMV9 641 aaKnown RBP14.62□□□□□ -0.07
USP40-205ENST00000430158 CYP2C8P10632 490 aa14.62□□□□□ -0.07
USP40-205ENST00000430158 TRDNQ13061 729 aa14.62□□□□□ -0.07
USP40-205ENST00000430158 CCDC178Q5BJE1 867 aa14.62□□□□□ -0.07
USP40-205ENST00000430158 NOM1Q5C9Z4 860 aaKnown RBP14.62□□□□□ -0.07
USP40-205ENST00000430158 POTEGQ6S5H5 508 aa14.62□□□□□ -0.07
USP40-205ENST00000430158 RASGRP2Q7LDG7 609 aa14.62□□□□□ -0.07
USP40-205ENST00000430158 CHST3Q7LGC8 479 aa14.62□□□□□ -0.07
USP40-205ENST00000430158 SPICE1Q8N0Z3 855 aa14.62□□□□□ -0.07
USP40-205ENST00000430158 P2RX7Q99572 595 aaKnown RBP14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms