RNA–Protein interactions for RNA: ENST00000428680.6

CNOT4-206, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 4,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-206ENST00000428680 RUFY1Q96T51 708 aa8.22□□□□□ -1.09
CNOT4-206ENST00000428680 ZNF541Q9H0D2 1346 aa8.21□□□□□ -1.09
CNOT4-206ENST00000428680 CHMP2AO43633 222 aa8.21□□□□□ -1.09
CNOT4-206ENST00000428680 FKTNO75072 461 aa8.21□□□□□ -1.09
CNOT4-206ENST00000428680 TRIM27P14373 513 aa8.21□□□□□ -1.09
CNOT4-206ENST00000428680 SMTNP53814 917 aa8.21□□□□□ -1.09
CNOT4-206ENST00000428680 AKNAD1Q5T1N1 836 aa8.21□□□□□ -1.09
CNOT4-206ENST00000428680 CCDC83Q8IWF9 413 aa8.21□□□□□ -1.09
CNOT4-206ENST00000428680 GLIPR1L2Q4G1C9 344 aa8.21□□□□□ -1.1
CNOT4-206ENST00000428680 CDAN1Q8IWY9 1227 aa8.21□□□□□ -1.1
CNOT4-206ENST00000428680 ABHD8Q96I13 439 aa8.21□□□□□ -1.1
CNOT4-206ENST00000428680 MMRN2Q9H8L6 949 aa8.21□□□□□ -1.1
CNOT4-206ENST00000428680 CCDC85CA6NKD9 419 aa8.21□□□□□ -1.1
CNOT4-206ENST00000428680 MRPS9P82933 396 aaKnown RBP8.21□□□□□ -1.1
CNOT4-206ENST00000428680 RNASELQ05823 741 aaKnown RBP8.21□□□□□ -1.1
CNOT4-206ENST00000428680 UBE4AQ14139 1066 aa8.21□□□□□ -1.1
CNOT4-206ENST00000428680 MICALL2Q8IY33 904 aa8.21□□□□□ -1.1
CNOT4-206ENST00000428680 SPATA5Q8NB90 893 aa8.21□□□□□ -1.1
CNOT4-206ENST00000428680 PYM1Q9BRP8 204 aaKnown RBP8.21□□□□□ -1.1
CNOT4-206ENST00000428680 ARMT1Q9H993 441 aa8.21□□□□□ -1.1
CNOT4-206ENST00000428680 ZFYVE28Q9HCC9 887 aa8.21□□□□□ -1.1
CNOT4-206ENST00000428680 SLX4Q8IY92 1834 aa8.2□□□□□ -1.1
CNOT4-206ENST00000428680 ERLIN2O94905 339 aa8.2□□□□□ -1.1
CNOT4-206ENST00000428680 BTDP43251 543 aa8.2□□□□□ -1.1
CNOT4-206ENST00000428680 ATP8B2P98198 1209 aa8.2□□□□□ -1.1
CNOT4-206ENST00000428680 CHRNDQ07001 517 aa8.2□□□□□ -1.1
CNOT4-206ENST00000428680 CXCL9Q07325 125 aa8.2□□□□□ -1.1
CNOT4-206ENST00000428680 MIGA2Q7L4E1 593 aa8.2□□□□□ -1.1
CNOT4-206ENST00000428680 ZNF397Q8NF99 534 aaPredicted RBP8.2□□□□□ -1.1
CNOT4-206ENST00000428680 GOLGA1Q92805 767 aa8.2□□□□□ -1.1
CNOT4-206ENST00000428680 OTUD5Q96G74 571 aa8.2□□□□□ -1.1
CNOT4-206ENST00000428680 WRNIP1Q96S55 665 aa8.2□□□□□ -1.1
CNOT4-206ENST00000428680 RTEL1Q9NZ71 1219 aa8.2□□□□□ -1.1
CNOT4-206ENST00000428680 MKRN1Q9UHC7 482 aaKnown RBP8.2□□□□□ -1.1
CNOT4-206ENST00000428680 CEP83Q9Y592 693 aa8.2□□□□□ -1.1
CNOT4-206ENST00000428680 CCDC169A6NNP5 214 aa8.2□□□□□ -1.1
CNOT4-206ENST00000428680 BMP15O95972 392 aa8.2□□□□□ -1.1
CNOT4-206ENST00000428680 NR2E3Q9Y5X4 410 aa8.2□□□□□ -1.1
CNOT4-206ENST00000428680 STRN3Q13033 797 aa8.2□□□□□ -1.1
CNOT4-206ENST00000428680 SEPT7Q16181 437 aaKnown RBP8.2□□□□□ -1.1
CNOT4-206ENST00000428680 MCF2L2Q86YR7 1114 aa8.2□□□□□ -1.1
CNOT4-206ENST00000428680 ARHGAP45Q92619 1136 aa8.2□□□□□ -1.1
CNOT4-206ENST00000428680 GTF3C6Q969F1 213 aa8.2□□□□□ -1.1
CNOT4-206ENST00000428680 SH2B1Q9NRF2 756 aaPredicted RBP8.2□□□□□ -1.1
CNOT4-206ENST00000428680 MARCKSP29966 332 aaPredicted RBP8.2□□□□□ -1.1
CNOT4-206ENST00000428680 MAP3K11Q16584 847 aa8.2□□□□□ -1.1
CNOT4-206ENST00000428680 FBXO46Q6PJ61 603 aaPredicted RBP8.2□□□□□ -1.1
CNOT4-206ENST00000428680 CCDC17Q96LX7 622 aa8.2□□□□□ -1.1
CNOT4-206ENST00000428680 TRIM5Q9C035 493 aa8.2□□□□□ -1.1
CNOT4-206ENST00000428680 DDX39AO00148 427 aaKnown RBP8.19□□□□□ -1.1
CNOT4-206ENST00000428680 PPFIA3O75145 1194 aa8.19□□□□□ -1.1
CNOT4-206ENST00000428680 ZNF853P0CG23 659 aa8.19□□□□□ -1.1
CNOT4-206ENST00000428680 ACTN2P35609 894 aa8.19□□□□□ -1.1
CNOT4-206ENST00000428680 ARID5AQ03989 594 aa8.19□□□□□ -1.1
CNOT4-206ENST00000428680 UTP14CQ5TAP6 766 aaKnown RBP8.19□□□□□ -1.1
CNOT4-206ENST00000428680 BRF1Q92994 677 aa8.19□□□□□ -1.1
CNOT4-206ENST00000428680 ANO3Q9BYT9 981 aa8.19□□□□□ -1.1
CNOT4-206ENST00000428680 MRPL11Q9Y3B7 192 aaKnown RBP8.19□□□□□ -1.1
CNOT4-206ENST00000428680 RBM25P49756 843 aaKnown RBP8.19□□□□□ -1.1
CNOT4-206ENST00000428680 AOC3Q16853 763 aa8.19□□□□□ -1.1
CNOT4-206ENST00000428680 AMIGO3Q86WK7 504 aa8.19□□□□□ -1.1
CNOT4-206ENST00000428680 FNBP1Q96RU3 617 aa8.19□□□□□ -1.1
CNOT4-206ENST00000428680 ADPGKQ9BRR6 497 aa8.19□□□□□ -1.1
CNOT4-206ENST00000428680 PDS5AQ29RF7 1337 aaKnown RBP8.19□□□□□ -1.1
CNOT4-206ENST00000428680 GPS2Q13227 327 aa8.19□□□□□ -1.1
CNOT4-206ENST00000428680 TSHZ3Q63HK5 1081 aa8.19□□□□□ -1.1
CNOT4-206ENST00000428680 MSANTD4Q8NCY6 345 aa8.19□□□□□ -1.1
CNOT4-206ENST00000428680 RPS6KC1Q96S38 1066 aa8.19□□□□□ -1.1
CNOT4-206ENST00000428680 ZNF341Q9BYN7 854 aa8.19□□□□□ -1.1
CNOT4-206ENST00000428680 CCPG1Q9ULG6 757 aa8.19□□□□□ -1.1
CNOT4-206ENST00000428680 MRVI1Q9Y6F6 885 aa8.19□□□□□ -1.1
CNOT4-206ENST00000428680 CCDC88AQ3V6T2 1871 aa8.19□□□□□ -1.1
CNOT4-206ENST00000428680 TLR3O15455 904 aaKnown RBP8.18□□□□□ -1.1
CNOT4-206ENST00000428680 SASH1O94885 1247 aa8.18□□□□□ -1.1
CNOT4-206ENST00000428680 PRPF38BQ5VTL8 546 aaKnown RBP8.18□□□□□ -1.1
CNOT4-206ENST00000428680 SAPCD2Q86UD0 394 aa8.18□□□□□ -1.1
CNOT4-206ENST00000428680 TBC1D16Q8TBP0 767 aa8.18□□□□□ -1.1
CNOT4-206ENST00000428680 RNF34Q969K3 372 aa8.18□□□□□ -1.1
CNOT4-206ENST00000428680 PANK2Q9BZ23 570 aa8.18□□□□□ -1.1
CNOT4-206ENST00000428680 ZHX2Q9Y6X8 837 aa8.18□□□□□ -1.1
CNOT4-206ENST00000428680 MTIF2P46199 727 aaKnown RBP8.18□□□□□ -1.1
CNOT4-206ENST00000428680 GTF2A2P52657 109 aa8.18□□□□□ -1.1
CNOT4-206ENST00000428680 IGBP1P78318 339 aa8.18□□□□□ -1.1
CNOT4-206ENST00000428680 TFAP4Q01664 338 aa8.18□□□□□ -1.1
CNOT4-206ENST00000428680 BIRC3Q13489 604 aa8.18□□□□□ -1.1
CNOT4-206ENST00000428680 CFAP100Q494V2 611 aa8.18□□□□□ -1.1
CNOT4-206ENST00000428680 JAKMIP3Q5VZ66 844 aa8.18□□□□□ -1.1
CNOT4-206ENST00000428680 TNMDQ9H2S6 317 aa8.18□□□□□ -1.1
CNOT4-206ENST00000428680 NOC2LQ9Y3T9 749 aaKnown RBP8.18□□□□□ -1.1
CNOT4-206ENST00000428680 DLG5Q8TDM6 1919 aa8.18□□□□□ -1.1
CNOT4-206ENST00000428680 ARHGEF35A5YM69 484 aa8.18□□□□□ -1.1
CNOT4-206ENST00000428680 MBD3O95983 291 aa8.18□□□□□ -1.1
CNOT4-206ENST00000428680 TFRCP02786 760 aaKnown RBP8.18□□□□□ -1.1
CNOT4-206ENST00000428680 ASNSP08243 561 aa8.18□□□□□ -1.1
CNOT4-206ENST00000428680 ZSCAN20P17040 1043 aaPredicted RBP8.18□□□□□ -1.1
CNOT4-206ENST00000428680 TAF4BQ92750 862 aa8.18□□□□□ -1.1
CNOT4-206ENST00000428680 TSPYL2Q9H2G4 693 aaPredicted RBP8.18□□□□□ -1.1
CNOT4-206ENST00000428680 SLC45A1Q9Y2W3 748 aa8.18□□□□□ -1.1
CNOT4-206ENST00000428680 NUB1Q9Y5A7 615 aa8.18□□□□□ -1.1
CNOT4-206ENST00000428680 PSME4Q14997 1843 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms